FFCP PHASE1:Hg19::chr1:203152872..203152879,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203152872..203152879,- | |||
|coexpression_cluster_id=C283 | |coexpression_cluster_id=C283 | ||
|description=CAGE_peak_at_chr1:203152872..203152879,- | |description=CAGE_peak_at_chr1:203152872..203152879,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000153!4.06e-26!9;CL:0000447!4.06e-26!9;CL:0000667!3.78e-18!6;CL:0000058!3.78e-18!6;CL:0000138!3.78e-18!6;CL:0000327!1.29e-16!14;CL:0000499!9.74e-15!27;CL:0000135!3.68e-10!3;CL:0000386!3.68e-10!3;CL:0000388!3.68e-10!3;CL:0000214!1.11e-09!3;CL:0000151!2.02e-08!35;CL:0002599!6.52e-08!1 | |ontology_enrichment_celltype=CL:0000153!4.06e-26!9;CL:0000447!4.06e-26!9;CL:0000667!3.78e-18!6;CL:0000058!3.78e-18!6;CL:0000138!3.78e-18!6;CL:0000327!1.29e-16!14;CL:0000499!9.74e-15!27;CL:0000135!3.68e-10!3;CL:0000386!3.68e-10!3;CL:0000388!3.68e-10!3;CL:0000214!1.11e-09!3;CL:0000151!2.02e-08!35;CL:0002599!6.52e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.35e-38;3!CL:0000388;1.35e-38;3!CL:0000138;7.84e-20;6!CL:0000499;1.09e-16;28!CL:0000771;2.21e-15;2!CL:0000153;1.40e-13;9!CL:0000447;1.40e-13;9!CL:0000327;1.53e-08;15 | |ontology_enrichment_celltype_v019=CL:0000135;1.35e-38;3!CL:0000388;1.35e-38;3!CL:0000138;7.84e-20;6!CL:0000499;1.09e-16;28!CL:0000771;2.21e-15;2!CL:0000153;1.40e-13;9!CL:0000447;1.40e-13;9!CL:0000327;1.53e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.01e-38,3;CL:0000388,1.01e-38,3;CL:0000058,9.49e-20,6;CL:0000138,9.49e-20,6;CL:0000499,1.11e-16,28;CL:0000771,2.05e-15,2;CL:0000153,1.58e-13,9;CL:0000447,1.58e-13,9;CL:0000327,1.65e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:5662!5.33e-08!1 | |ontology_enrichment_disease=DOID:5662!5.33e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!3.68e-10!3;UBERON:0006915!1.11e-09!3;UBERON:0002018!1.11e-09!3;UBERON:0002217!1.11e-09!3;UBERON:0007616!1.11e-09!3;UBERON:0001896!3.52e-09!3;UBERON:0005290!3.52e-09!3;UBERON:0010096!3.52e-09!3;UBERON:0001282!3.80e-08!1;UBERON:0009842!3.80e-08!1;UBERON:0003704!3.80e-08!1;UBERON:0001171!3.80e-08!1;UBERON:0001172!3.80e-08!1;UBERON:0002363!6.97e-08!1;UBERON:0007647!6.97e-08!1;UBERON:0010115!6.97e-08!1;UBERON:0002022!1.99e-07!1 | |ontology_enrichment_uberon=UBERON:0000043!3.68e-10!3;UBERON:0006915!1.11e-09!3;UBERON:0002018!1.11e-09!3;UBERON:0002217!1.11e-09!3;UBERON:0007616!1.11e-09!3;UBERON:0001896!3.52e-09!3;UBERON:0005290!3.52e-09!3;UBERON:0010096!3.52e-09!3;UBERON:0001282!3.80e-08!1;UBERON:0009842!3.80e-08!1;UBERON:0003704!3.80e-08!1;UBERON:0001171!3.80e-08!1;UBERON:0001172!3.80e-08!1;UBERON:0002363!6.97e-08!1;UBERON:0007647!6.97e-08!1;UBERON:0010115!6.97e-08!1;UBERON:0002022!1.99e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.35e-38;3!UBERON:0000043;1.35e-38;3!UBERON:0007845;1.35e-38;3!UBERON:0001282;2.73e-29;1!UBERON:0009842;2.73e-29;1!UBERON:0003704;2.73e-29;1!UBERON:0001171;2.73e-29;1!UBERON:0001172;2.73e-29;1!UBERON:0001280;1.04e-10;3!UBERON:0004647;1.04e-10;3!UBERON:0002394;2.35e-08;4!UBERON:0003928;2.35e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0007846;1.35e-38;3!UBERON:0000043;1.35e-38;3!UBERON:0007845;1.35e-38;3!UBERON:0001282;2.73e-29;1!UBERON:0009842;2.73e-29;1!UBERON:0003704;2.73e-29;1!UBERON:0001171;2.73e-29;1!UBERON:0001172;2.73e-29;1!UBERON:0001280;1.04e-10;3!UBERON:0004647;1.04e-10;3!UBERON:0002394;2.35e-08;4!UBERON:0003928;2.35e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.01e-38,3;UBERON:0000043,1.01e-38,3;UBERON:0007845,1.01e-38,3;UBERON:0001282,3.16e-29,1;UBERON:0009842,3.16e-29,1;UBERON:0003704,3.16e-29,1;UBERON:0001171,3.16e-29,1;UBERON:0001172,3.16e-29,1;UBERON:0001280,1.09e-10,3;UBERON:0004647,1.09e-10,3;UBERON:0005171,1.09e-10,3 | |||
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|short_description=p@chr1:203152872..203152879,- | |short_description=p@chr1:203152872..203152879,- | ||
}} | }} |
Latest revision as of 02:24, 28 July 2015
Short description: | p@chr1:203152872..203152879, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203152872..203152879, - |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.01e-38 | 3 |
tendon cell | 1.01e-38 | 3 |
chondroblast | 9.49e-20 | 6 |
chondrocyte | 9.49e-20 | 6 |
stromal cell | 1.11e-16 | 28 |
eosinophil | 2.05e-15 | 2 |
GAG secreting cell | 1.58e-13 | 9 |
carbohydrate secreting cell | 1.58e-13 | 9 |
extracellular matrix secreting cell | 1.65e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.01e-38 | 3 |
tendon | 1.01e-38 | 3 |
regular connective tissue | 1.01e-38 | 3 |
intralobular bile duct | 3.16e-29 | 1 |
acinus | 3.16e-29 | 1 |
intrahepatic bile duct | 3.16e-29 | 1 |
portal lobule | 3.16e-29 | 1 |
hepatic acinus | 3.16e-29 | 1 |
liver parenchyma | 1.09e-10 | 3 |
liver lobule | 1.09e-10 | 3 |
hepatic duct | 1.09e-10 | 3 |