FFCP PHASE1:Hg19::chr1:230558595..230558601,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:230558595..230558601,- | |||
|description=CAGE_peak_at_chr1:230558595..230558601,- | |description=CAGE_peak_at_chr1:230558595..230558601,- | ||
|id=chr1:230558595..230558601,- | |id=chr1:230558595..230558601,- | ||
|ontology_enrichment_celltype=CL:0000817;1.61e-13;1!CL:0000946;6.82e-13;1!CL:1001319;6.82e-13;1!CL:1000600;6.82e-13;1!CL:0000786;6.82e-13;1!CL:0000945;4.30e-08;24 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000817;1.61e-13;1!CL:0000946;6.82e-13;1!CL:1001319;6.82e-13;1!CL:1000600;6.82e-13;1!CL:0000786;6.82e-13;1!CL:0000945;4.30e-08;24 | ||
|ontology_enrichment_disease=DOID:6193;6.82e-13;1!DOID:2355;6.82e-13;1!DOID:74;4.42e-07;2!DOID:3350;4.42e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0000817,1.17e-16,3;CL:1001319,4.23e-13,1;CL:1000600,4.23e-13,1;CL:0000946,9.73e-13,1;CL:0000786,9.73e-13,1;CL:0000980,9.73e-13,1;CL:0000945,4.77e-08,24;CL:0000826,4.77e-08,24;CL:0000785,5.28e-07,2;CL:0000955,5.28e-07,2;CL:0000818,5.28e-07,2;CL:0000954,5.28e-07,2;CL:0000816,5.28e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0004645;6.82e-13;1!UBERON:0001256;6.82e-13;1!UBERON:0001259;6.82e-13;1!UBERON:0001255;4.42e-07;2!UBERON:0001556;4.42e-07;2 | |ontology_enrichment_development_v019=CL:0000954;4.42e-07;2 | ||
|ontology_enrichment_disease=DOID:162!1.97e-31!235;DOID:14566!2.40e-31!239;DOID:0050686!1.53e-20!137;DOID:0050687!1.04e-17!143;DOID:2531!2.08e-17!51;DOID:0060083!2.08e-17!51;DOID:305!1.30e-16!106;DOID:1240!6.47e-15!39;DOID:8692!1.71e-10!31;DOID:1036!1.22e-08!8;DOID:299!6.92e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:6193;6.82e-13;1!DOID:2355;6.82e-13;1!DOID:74;4.42e-07;2!DOID:3350;4.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.64e-13,1;DOID:2355,1.09e-12,1;DOID:2531,5.53e-08,51;DOID:0060083,5.53e-08,51;DOID:162,6.74e-08,235;DOID:14566,1.08e-07,239;DOID:3350,4.98e-07,2;DOID:74,5.60e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;6.82e-13;1!UBERON:0001256;6.82e-13;1!UBERON:0001259;6.82e-13;1!UBERON:0001255;4.42e-07;2!UBERON:0001556;4.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.23e-13,1;UBERON:0001256,4.23e-13,1;UBERON:0001259,4.23e-13,1;UBERON:0001255,3.48e-07,2;UBERON:0001556,3.48e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697204805222715,2.84338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0.232387885739037,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,9.08896041751603,0.0711418433484141,2.39139409093234,0.997896857164083,0,0,0,0,0.456469358066384,0.156679895773023,0,0,0.321176150207399,0,0,0,0.307240764308458,0,1.33479313369527,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0.36408156524854,0,0.284136146806413,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0.1137934482855,0,0.236387681767936,5.8606373451049,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0.269272933229316,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.503464760927528,5.88236571444974,0.794682894901893,0.843992258112108,0.816164040795739,0.989471500037586,0,0,0,0,1.77912677208373,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.901940516486955,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0.34823682632161,0,1.20390222730132,0.0967563312890851,0.0730893170861856,0,0,0,0,0.274083849293502,0,0,0,0.320635281006135,0,0,0.432271251462318,0.229073192331831,0.171594997861965,0.288109595976299,0,0,0.135904206073614,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,1.01607998478941,0,0.136203406111576,0.160753148465019,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04993214870357,0,0,0,0,0,0,0,0,0,0.79994958341972,0.746842107858986,0,0,0,0,0,0.383683113910955,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825788063434183,0,0.115525666150338,0,0.690359926060101,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,2.00929529502746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.335566295393377,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0.237840181555137,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.357107877211315,1.41157948686277,0,0,0,0,0.315543124386369,0,0,0,0,0,0,3.40649347054713,1.52971800749174,0.253397002022874,0.305966489225945,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,1.87227517805241,0,0,0.179650404213174,0,0,0,0,0,0 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| ||
|short_description=p@chr1:230558595..230558601,- | |short_description=p@chr1:230558595..230558601,- | ||
}} | }} |
Latest revision as of 04:57, 28 July 2015
Short description: | p@chr1:230558595..230558601, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:230558595..230558601, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.17e-16 | 3 |
bladder cell | 4.23e-13 | 1 |
lower urinary tract cell | 4.23e-13 | 1 |
antibody secreting cell | 9.73e-13 | 1 |
plasma cell | 9.73e-13 | 1 |
plasmablast | 9.73e-13 | 1 |
lymphocyte of B lineage | 4.77e-08 | 24 |
pro-B cell | 4.77e-08 | 24 |
mature B cell | 5.28e-07 | 2 |
pre-B-II cell | 5.28e-07 | 2 |
transitional stage B cell | 5.28e-07 | 2 |
small pre-B-II cell | 5.28e-07 | 2 |
immature B cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.23e-13 | 1 |
wall of urinary bladder | 4.23e-13 | 1 |
mucosa of urinary bladder | 4.23e-13 | 1 |
urinary bladder | 3.48e-07 | 2 |
lower urinary tract | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.64e-13 | 1 |
anemia | 1.09e-12 | 1 |
hematologic cancer | 5.53e-08 | 51 |
immune system cancer | 5.53e-08 | 51 |
cancer | 6.74e-08 | 235 |
disease of cellular proliferation | 1.08e-07 | 239 |
mesenchymal cell neoplasm | 4.98e-07 | 2 |
hematopoietic system disease | 5.60e-07 | 2 |