FFCP PHASE1:Hg19::chr1:236140360..236140388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:236140360..236140388,- | |||
|coexpression_cluster_id=C932 | |||
|description=CAGE_peak_at_chr1:236140360..236140388,- | |description=CAGE_peak_at_chr1:236140360..236140388,- | ||
|id=chr1:236140360..236140388,- | |id=chr1:236140360..236140388,- | ||
|ontology_enrichment_celltype=CL:0000057!1.03e-12!75;CL:0000055!1.15e-12!180;CL:0002620!2.81e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.03e-12!75;CL:0000055!1.15e-12!180;CL:0002620!2.81e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.59e-10;6!CL:0002615;2.82e-09;3!CL:0002564;2.81e-08;3!CL:0000136;2.12e-07;13!CL:0002617;6.86e-07;2!CL:0002195;7.25e-07;2!CL:0002571;7.25e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,9.21e-10,6;CL:0002138,9.21e-10,6;CL:0005022,9.21e-10,6;CL:0002615,2.82e-09,3;CL:0002564,3.72e-08,3;CL:0002617,6.65e-07,2;CL:0002195,6.84e-07,2;CL:0002571,6.84e-07,2 | |||
|ontology_enrichment_development_v019=CL:0005022;2.59e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.07e-08;5!DOID:450;5.07e-08;5!DOID:66;5.07e-08;5!DOID:423;5.07e-08;5!DOID:0080000;5.07e-08;5!DOID:11722;5.07e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.47e-08,5;DOID:450,6.47e-08,5;DOID:66,6.47e-08,5;DOID:423,6.47e-08,5;DOID:0080000,6.47e-08,5;DOID:11722,6.47e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.72e-08;5!UBERON:0002216;2.72e-08;5!UBERON:0011134;2.72e-08;5!UBERON:0002209;2.72e-08;5!UBERON:0002213;2.72e-08;5!UBERON:0007844;2.72e-08;5!UBERON:0011138;2.72e-08;5!UBERON:0001130;2.72e-08;5!UBERON:0001066;2.72e-08;5!UBERON:0001468;2.72e-08;5!UBERON:0002242;2.81e-08;3!UBERON:0004905;1.22e-07;8!UBERON:0000982;1.22e-07;8!UBERON:0001473;1.22e-07;8!UBERON:0004770;1.22e-07;8!UBERON:0004536;1.22e-07;8!UBERON:0006558;1.22e-07;8!UBERON:0003688;1.55e-07;6!UBERON:0002358;1.55e-07;6!UBERON:0003684;1.55e-07;6!UBERON:0001178;1.55e-07;6!UBERON:0004457;2.95e-07;9!UBERON:0000042;2.95e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.71e-08,5;UBERON:0002216,2.71e-08,5;UBERON:0011134,2.71e-08,5;UBERON:0002209,2.71e-08,5;UBERON:0002213,2.71e-08,5;UBERON:0005856,2.71e-08,5;UBERON:0005866,2.71e-08,5;UBERON:0005863,2.71e-08,5;UBERON:0007844,2.71e-08,5;UBERON:0011138,2.71e-08,5;UBERON:0001130,2.71e-08,5;UBERON:0001066,2.71e-08,5;UBERON:0001468,2.71e-08,5;UBERON:0002242,3.72e-08,3;UBERON:0003068,3.72e-08,3;UBERON:0002328,3.72e-08,3;UBERON:0004880,3.72e-08,3;UBERON:0004905,1.42e-07,8;UBERON:0000982,1.42e-07,8;UBERON:0004770,1.42e-07,8;UBERON:0003688,2.31e-07,6;UBERON:0002358,2.31e-07,6;UBERON:0003684,2.31e-07,6;UBERON:0001178,2.31e-07,6;UBERON:0001473,3.06e-07,8;UBERON:0004536,3.06e-07,8;UBERON:0006558,3.06e-07,8 | |||
|phase1_expression=3.45188920614058,8.34992043174834,4.93340414335899,2.00146596706261,3.5756887554183,0.872338524100369,0,0,4.17897005119742,0,0,0,0,1.60896258848061,0.994192127183747,0.672325146451775,0,0,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.376627918784408,0.152826811495903,0,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0.361439152384566,1.00267582127178,0.434539556882471,0,0.486634870302636,0.189069634328136,0.665188192387692,0.351339142772504,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,1.03366703667732,0.35576626268671,1.33888245105868,0.402829317109147,1.52054421143703,1.46437234528902,0,0,0.357198913136319,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,0.264818361626438,1.72101972449288,0.354668382198357,0,0,0.98667019366864,1.24484414159907,0.269421344139376,1.14423332179421,1.96764655938411,5.18558332031999,0.937285727335186,0.312160076830321,0,0.747243402759005,0,0.485618833104395,0.140450806702248,0.408308342509787,0.368502951935304,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0.336672227908132,0.250237039743928,0,0,0.919463387397059,0.300476117813194,0.113432183160021,1.61450672119976,1.2813443329114,1.48352330811693,1.20036438433761,0.412210116953756,0.515281080091258,0.930584281657949,0.843881661206331,0.292311015483596,1.51460264546469,0.828449087780694,0.323292113637624,1.42003837006646,0.403008392910561,0.67824236924195,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0.643240938192885,0,3.25057549622385,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0,0,0.122988438543114,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0.463721619900307,0.117408694235822,1.01056513432752,1.38895653772983,2.09279567458058,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0.763976851116555,0,1.71072446022705,0,0.300343057843917,0,0.336393253036082,0.43596006883328,0.7333828582095,0.129271715757778,7.15312891703765,1.690605505112,1.59562869950922,0,0.514414748524284,0,0.266422179016099,6.29103172095849,17.9065129779176,0,0.65147236858747,3.55391948742546,0,0,0,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,3.28762116080613,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,2.50085260529839,1.08506009479894,0.831883446123229,0.713715955188647,0.157702415033935,0.819989904948992,0.300946099727719,0,0,0,0,0.521301686808497,0.979005787313703,3.0882908142977,0,0,0,0,0,0,0.248107807818777,0.61384789315225,3.36792113319688,0.768834895534206,1.02341449813341,0.965123526861645,0,0.771048469013278,0.177561725313127,0.246381468041427,1.55776328755086,0.464841513839837,0.241718899183244,0.200506470303285,0.276242966807689,0.803701137152247,1.63882051206045,1.96686622439136,0,0.0770153371044148,0,0,0.211103257785751,0,0.680374821106063,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.206082023295445,0.183138929636687,0.247528499761764,0,0.650060246036521,0,0.386682873168488,1.07834031980251,0.614014698904518,0.413509717453592,1.50388342815583,1.16013355131383,0.767039646744908,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0.924100740528266,0,0,0.18532421910392,0,0.372158369359667,1.2655176988749,0,0,0.855877976067841,0,0,1.79872457583315,0,0.471249609382746,0.202182481573316,0,0,0.48763373908959,1.21856744815642,0,0.682499557039929,4.80778468642623,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,0.354761064070598,0.844430541190656,1.31717957183961,0.75894634753143,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,1.14117339516596,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0.500547425135725,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.307801034015188,0,0.23056390438806,1.79515288819544,0.325942115766024,0.638002319463839,1.4655614944298,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,1.99052386215701,0.265372693510018,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.387956065953678,0,1.35588444468319,0.411125773940253,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| ||
|short_description=p@chr1:236140360..236140388,- | |short_description=p@chr1:236140360..236140388,- | ||
}} | }} |
Latest revision as of 05:25, 28 July 2015
Short description: | p@chr1:236140360..236140388, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236140360..236140388, - |
Coexpression cluster: | C932_Mesenchymal_Adipocyte_Endothelial_Fibroblast_Renal_Pericytes_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 9.21e-10 | 6 |
endothelial cell of lymphatic vessel | 9.21e-10 | 6 |
vascular lymphangioblast | 9.21e-10 | 6 |
adipocyte of omentum tissue | 2.82e-09 | 3 |
nucleus pulposus cell of intervertebral disc | 3.72e-08 | 3 |
adipocyte of breast | 6.65e-07 | 2 |
hepatic stem cell | 6.84e-07 | 2 |
hepatic mesenchymal stem cell | 6.84e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.71e-08 | 5 |
symphysis | 2.71e-08 | 5 |
nonsynovial joint | 2.71e-08 | 5 |
fibrous joint | 2.71e-08 | 5 |
cartilaginous joint | 2.71e-08 | 5 |
developing mesenchymal condensation | 2.71e-08 | 5 |
pre-cartilage condensation | 2.71e-08 | 5 |
cartilaginous condensation | 2.71e-08 | 5 |
cartilage element | 2.71e-08 | 5 |
post-cranial axial skeletal system | 2.71e-08 | 5 |
vertebral column | 2.71e-08 | 5 |
intervertebral disk | 2.71e-08 | 5 |
intervertebral joint | 2.71e-08 | 5 |
nucleus pulposus | 3.72e-08 | 3 |
axial mesoderm | 3.72e-08 | 3 |
notochord | 3.72e-08 | 3 |
chordamesoderm | 3.72e-08 | 3 |
articulation | 1.42e-07 | 8 |
skeletal joint | 1.42e-07 | 8 |
articular system | 1.42e-07 | 8 |
omentum | 2.31e-07 | 6 |
peritoneum | 2.31e-07 | 6 |
abdominal cavity | 2.31e-07 | 6 |
visceral peritoneum | 2.31e-07 | 6 |
lymphatic vessel | 3.06e-07 | 8 |
lymph vasculature | 3.06e-07 | 8 |
lymphatic part of lymphoid system | 3.06e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.47e-08 | 5 |
myotonic disease | 6.47e-08 | 5 |
muscle tissue disease | 6.47e-08 | 5 |
myopathy | 6.47e-08 | 5 |
muscular disease | 6.47e-08 | 5 |
myotonic dystrophy | 6.47e-08 | 5 |