FFCP PHASE1:Hg19::chr1:236141280..236141292,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:236141280..236141292,- | |||
|coexpression_cluster_id=C932 | |coexpression_cluster_id=C932 | ||
|description=CAGE_peak_at_chr1:236141280..236141292,- | |description=CAGE_peak_at_chr1:236141280..236141292,- | ||
|id=chr1:236141280..236141292,- | |id=chr1:236141280..236141292,- | ||
|ontology_enrichment_celltype=CL:0000055!1.00e-13!180;CL:0000057!3.23e-10!75;CL:0000222!4.12e-07!119;CL:0002620!7.54e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.00e-13!180;CL:0000057!3.23e-10!75;CL:0000222!4.12e-07!119;CL:0002620!7.54e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.05e-11;13!CL:0002564;3.85e-07;3!CL:0002521;4.21e-07;3!CL:0002615;4.21e-07;3!CL:0002622;7.70e-07;3!CL:0002620;7.93e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.80e-12,15;CL:0002521,3.53e-07,3;CL:0002564,3.90e-07,3;CL:0002615,4.31e-07,3;CL:0002622,9.84e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;9.31e-09;5!DOID:450;9.31e-09;5!DOID:66;9.31e-09;5!DOID:423;9.31e-09;5!DOID:0080000;9.31e-09;5!DOID:11722;9.31e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.71e-08,5;DOID:450,2.71e-08,5;DOID:66,2.71e-08,5;DOID:423,2.71e-08,5;DOID:0080000,2.71e-08,5;DOID:11722,2.71e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0005256!8.62e-08!143;UBERON:0002199!1.56e-07!45;UBERON:0002416!1.56e-07!45 | |ontology_enrichment_uberon=UBERON:0005256!8.62e-08!143;UBERON:0002199!1.56e-07!45;UBERON:0002416!1.56e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;8.01e-10;5!UBERON:0002216;8.01e-10;5!UBERON:0011134;8.01e-10;5!UBERON:0002209;8.01e-10;5!UBERON:0002213;8.01e-10;5!UBERON:0007844;8.01e-10;5!UBERON:0011138;8.01e-10;5!UBERON:0001130;8.01e-10;5!UBERON:0001066;8.01e-10;5!UBERON:0001468;8.01e-10;5!UBERON:0002199;6.03e-09;46!UBERON:0002416;6.03e-09;46!UBERON:0004905;3.71e-08;8!UBERON:0000982;3.71e-08;8!UBERON:0004770;3.71e-08;8!UBERON:0002242;3.85e-07;3!UBERON:0002190;4.21e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.18e-11,46;UBERON:0002416,1.18e-11,46;UBERON:0011135,8.48e-10,5;UBERON:0002216,8.48e-10,5;UBERON:0011134,8.48e-10,5;UBERON:0002209,8.48e-10,5;UBERON:0002213,8.48e-10,5;UBERON:0005856,8.48e-10,5;UBERON:0005866,8.48e-10,5;UBERON:0005863,8.48e-10,5;UBERON:0007844,8.48e-10,5;UBERON:0011138,8.48e-10,5;UBERON:0001130,8.48e-10,5;UBERON:0001066,8.48e-10,5;UBERON:0001468,8.48e-10,5;UBERON:0004905,3.30e-08,8;UBERON:0000982,3.30e-08,8;UBERON:0004770,3.30e-08,8;UBERON:0002097,4.17e-08,41;UBERON:0002190,3.53e-07,3;UBERON:0002242,3.90e-07,3;UBERON:0003068,3.90e-07,3;UBERON:0002328,3.90e-07,3;UBERON:0004880,3.90e-07,3;UBERON:0002072,9.77e-07,5 | |||
|phase1_expression=2.18014055124668,9.84862409898522,2.53717927372748,3.00219895059391,5.36353313312745,2.61701557230111,5.06599756336621,2.52687949370732,3.65659879479774,0.245733936501509,0,0.218441372130172,0,1.11389717664042,1.65698687863958,2.01697543935533,0.602694528023977,0,0.975865597581014,0.246242116153576,0.816002764977012,0.313454721478088,0.286235987131057,0.273748850145768,0.125542639594803,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0.236482229888585,0,1.29096936716765,0,0.376484679085209,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0,0,0.425208599930087,0.209658645508376,0.22465726229299,0.300353785683013,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.255725123687061,1.0843174571537,0,1.30361867064741,0,0,0.189069634328136,0,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,1.67799774483962,1.92582629358047,0,0.258416759169329,0.71153252537342,0.66944122552934,2.41697590265488,0,8.29810995663776,0,4.0507097394088,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,3.44203944898576,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.326923806226917,4.38936540170301,3.45705554687999,0.937285727335186,0.312160076830321,0,1.94283284717341,0.704606991862589,0.971237666208789,0.140450806702248,0.61246251376468,0.737005903870608,0.413303124703062,0,0.989067717114227,0,0.718618141816238,0.168336113954066,0.875829639103749,0,0,0,0.751190294532984,0.567160915800105,2.15267562826634,1.06778694409284,1.27159140695737,1.20036438433761,1.13357782162283,1.03056216018252,0,0.337552664482532,1.16924406193438,1.26216887122057,0.460249493211497,1.45481451136931,1.06502877754984,0.906768884048762,0,0,0,0,0.487894824518382,0.397589304964456,0.580969714347592,0.414644220061482,0.504641701751257,0,0,1.92972281457866,0,4.64367928031979,3.60939740834793,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0.234817388471643,1.01056513432752,1.38895653772983,0.951270761172991,0,0,0.246217006087397,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0.063497894292169,0,1.17217447210047,1.71072446022705,0.411309970813294,0,0.285826432630578,0.560655421726804,0.43596006883328,1.24675085895615,0.129271715757778,7.15312891703765,0.845302752556,3.72313363218819,2.08014873822732,0.514414748524284,0,0.799266537048298,8.721657613147,18.4491345833091,0.823240336780769,0.977208552881205,6.04166312862328,0,0,0,0.199945982364114,1.2162378064119,0.502257091432126,0,0.718874566474748,1.14861935834114,0,0.579125226670317,3.08214483825575,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,3.92612773501248,7.00238729483548,2.17012018959788,1.87173775377726,2.49800584316026,1.10391690523754,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.955719759148911,1.17480694477644,7.89229874764969,0,0,0,0,0,0,0.744323423456331,0.460385919864187,3.64858122762996,0.256278298511402,0,0.64341568457443,0,1.23367755042124,0.887808626565635,0.0821271560138091,2.59627214591811,0.929683027679674,0.120859449591622,0.200506470303285,0.644566922551274,2.06666006696292,3.27764102412091,2.22911505431021,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0.850468526382578,1.0795795805107,6.16909010761157,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0,0,1.30012049207304,3.21367859688319,0.193341436584244,0.770243085573222,0.767518373630648,0.827019434907183,1.71872391789238,1.88521702088497,0.767039646744908,0.356128142586949,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0,1.116475108079,0,0.762520775695299,0.767693373934002,0.855877976067841,0.318203247925937,0,0.179872457583315,2.47083326762449,1.53156123049392,0,0,0.421258456238981,0.48763373908959,2.68084838594413,0,1.63799893689583,4.3835683905651,0,0,0.66343897524122,0.438450885253763,1.15755106853338,2.62357900818653,0,0,0.563391205064483,0.286822704408103,0.88424136911809,0,0.709522128141196,1.47775344708365,0.987884678879706,1.13841952129715,1.39973888097993,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0,0,1.24415835064723,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0,0,0,0,0.384751292518985,0,0.23056390438806,0.718061155278177,0.217294743844016,0.31900115973192,0.732780747214898,0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| ||
|short_description=p@chr1:236141280..236141292,- | |short_description=p@chr1:236141280..236141292,- | ||
}} | }} |
Latest revision as of 05:25, 28 July 2015
Short description: | p@chr1:236141280..236141292, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236141280..236141292, - |
Coexpression cluster: | C932_Mesenchymal_Adipocyte_Endothelial_Fibroblast_Renal_Pericytes_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.80e-12 | 15 |
subcutaneous fat cell | 3.53e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 3.90e-07 | 3 |
adipocyte of omentum tissue | 4.31e-07 | 3 |
prostate stromal cell | 9.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 1.18e-11 | 46 |
integumental system | 1.18e-11 | 46 |
intervertebral cartilage | 8.48e-10 | 5 |
symphysis | 8.48e-10 | 5 |
nonsynovial joint | 8.48e-10 | 5 |
fibrous joint | 8.48e-10 | 5 |
cartilaginous joint | 8.48e-10 | 5 |
developing mesenchymal condensation | 8.48e-10 | 5 |
pre-cartilage condensation | 8.48e-10 | 5 |
cartilaginous condensation | 8.48e-10 | 5 |
cartilage element | 8.48e-10 | 5 |
post-cranial axial skeletal system | 8.48e-10 | 5 |
vertebral column | 8.48e-10 | 5 |
intervertebral disk | 8.48e-10 | 5 |
intervertebral joint | 8.48e-10 | 5 |
articulation | 3.30e-08 | 8 |
skeletal joint | 3.30e-08 | 8 |
articular system | 3.30e-08 | 8 |
skin of body | 4.17e-08 | 41 |
subcutaneous adipose tissue | 3.53e-07 | 3 |
nucleus pulposus | 3.90e-07 | 3 |
axial mesoderm | 3.90e-07 | 3 |
notochord | 3.90e-07 | 3 |
chordamesoderm | 3.90e-07 | 3 |
hypodermis | 9.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.71e-08 | 5 |
myotonic disease | 2.71e-08 | 5 |
muscle tissue disease | 2.71e-08 | 5 |
myopathy | 2.71e-08 | 5 |
muscular disease | 2.71e-08 | 5 |
myotonic dystrophy | 2.71e-08 | 5 |