FFCP PHASE1:Hg19::chr1:246345465..246345467,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:246345465..246345467,- | |||
|coexpression_cluster_id=C431 | |||
|description=CAGE_peak_at_chr1:246345465..246345467,- | |description=CAGE_peak_at_chr1:246345465..246345467,- | ||
|id=chr1:246345465..246345467,- | |id=chr1:246345465..246345467,- | ||
|ontology_enrichment_celltype=CL:0002274!5.68e-28!5;CL:0000457!5.68e-28!5;CL:0002191!5.68e-28!5;CL:0000097!5.68e-28!5;CL:0000831!5.68e-28!5;CL:0002028!5.68e-28!5;CL:0000763!1.53e-24!112;CL:0000049!1.53e-24!112;CL:0000037!1.51e-15!172;CL:0000566!1.51e-15!172;CL:0000163!1.91e-15!9;CL:0002032!5.85e-15!165;CL:0000837!5.85e-15!165;CL:0000988!2.17e-14!182;CL:0001014!1.06e-11!2;CL:0001016!1.06e-11!2 | |ontology_enrichment_celltype=CL:0002274!5.68e-28!5;CL:0000457!5.68e-28!5;CL:0002191!5.68e-28!5;CL:0000097!5.68e-28!5;CL:0000831!5.68e-28!5;CL:0002028!5.68e-28!5;CL:0000763!1.53e-24!112;CL:0000049!1.53e-24!112;CL:0000037!1.51e-15!172;CL:0000566!1.51e-15!172;CL:0000163!1.91e-15!9;CL:0002032!5.85e-15!165;CL:0000837!5.85e-15!165;CL:0000988!2.17e-14!182;CL:0001014!1.06e-11!2;CL:0001016!1.06e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.71e-50;5!CL:0000163;5.58e-28;9!CL:0000763;1.34e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.45e-50,5;CL:0002028,2.45e-50,5;CL:0000163,5.28e-28,9;CL:0000763,4.05e-27,108;CL:0000049,4.05e-27,108;CL:0002032,2.03e-17,161;CL:0000837,2.03e-17,161;CL:0000037,1.37e-16,168;CL:0000988,1.28e-15,177;CL:0000151,6.39e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000049;2.64e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!3.15e-52!31;DOID:1240!1.09e-40!39;DOID:2531!3.61e-30!51;DOID:0060083!3.61e-30!51;DOID:1036!1.65e-23!8;DOID:0050686!1.14e-08!137;DOID:225!6.43e-07!1;DOID:8552!8.03e-07!1;DOID:9119!9.48e-07!1 | |ontology_enrichment_disease=DOID:8692!3.15e-52!31;DOID:1240!1.09e-40!39;DOID:2531!3.61e-30!51;DOID:0060083!3.61e-30!51;DOID:1036!1.65e-23!8;DOID:0050686!1.14e-08!137;DOID:225!6.43e-07!1;DOID:8552!8.03e-07!1;DOID:9119!9.48e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.32e-42;31!DOID:1240;7.82e-25;39!DOID:2531;7.74e-18;51!DOID:0060083;7.74e-18;51!DOID:1036;9.44e-12;8!DOID:225;2.07e-11;1!DOID:9119;4.01e-11;1!DOID:8552;4.01e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.87e-44,31;DOID:1240,7.56e-35,39;DOID:2531,3.01e-26,51;DOID:0060083,3.01e-26,51;DOID:1036,8.93e-12,8;DOID:225,1.97e-11,1;DOID:8552,2.96e-11,1;DOID:9119,4.01e-11,1;DOID:0050686,1.49e-08,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr1:246345465..246345467,- | |short_description=p@chr1:246345465..246345467,- | ||
}} | }} |
Latest revision as of 06:04, 28 July 2015
Short description: | p@chr1:246345465..246345467, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:246345465..246345467, - |
Coexpression cluster: | C431_acute_leukemia_Mast_leiomyoblastoma_chronic_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.45e-50 | 5 |
basophil mast progenitor cell | 2.45e-50 | 5 |
endocrine cell | 5.28e-28 | 9 |
myeloid cell | 4.05e-27 | 108 |
common myeloid progenitor | 4.05e-27 | 108 |
hematopoietic oligopotent progenitor cell | 2.03e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-17 | 161 |
hematopoietic stem cell | 1.37e-16 | 168 |
hematopoietic cell | 1.28e-15 | 177 |
secretory cell | 6.39e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.87e-44 | 31 |
leukemia | 7.56e-35 | 39 |
hematologic cancer | 3.01e-26 | 51 |
immune system cancer | 3.01e-26 | 51 |
chronic leukemia | 8.93e-12 | 8 |
syndrome | 1.97e-11 | 1 |
chronic myeloid leukemia | 2.96e-11 | 1 |
acute myeloid leukemia | 4.01e-11 | 1 |
organ system cancer | 1.49e-08 | 137 |