FFCP PHASE1:Hg19::chr1:6545502..6545548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=57449 | |EntrezGene=entrezgene:57449 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29105 | |HGNC=HGNC:29105 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=F5GZ21 | |UniProt=uniprot:F5GZ21 | ||
|association_with_transcript=0bp_to_ENST00000535355,uc010nzr.1_5end | |association_with_transcript=0bp_to_ENST00000535355,uc010nzr.1_5end | ||
|cluster_id=chr1:6545502..6545548,- | |||
|coexpression_cluster_id=C140 | |coexpression_cluster_id=C140 | ||
|description=CAGE_peak_2_at_PLEKHG5_5end | |description=CAGE_peak_2_at_PLEKHG5_5end |
Revision as of 09:46, 28 July 2015
Short description: | p2@PLEKHG5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLEKHG5_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000535355, uc010nzr.1_5end |
EntrezGene: | 57449 |
HGNC: | 29105 |
UniProt: | F5GZ21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@PLEKHG5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.66e-31 | 36 |
endothelial cell of vascular tree | 1.01e-28 | 24 |
meso-epithelial cell | 7.90e-27 | 45 |
blood vessel endothelial cell | 3.73e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.73e-22 | 18 |
lining cell | 2.16e-15 | 58 |
barrier cell | 2.16e-15 | 58 |
endothelial cell of artery | 8.90e-12 | 9 |
mesodermal cell | 2.27e-10 | 121 |
vein endothelial cell | 1.71e-08 | 6 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.16e-34 | 240 |
tube | 5.56e-34 | 192 |
vessel | 2.33e-27 | 68 |
circulatory system | 1.96e-26 | 112 |
vasculature | 6.89e-26 | 78 |
vascular system | 6.89e-26 | 78 |
splanchnic layer of lateral plate mesoderm | 3.39e-25 | 83 |
epithelial tube | 4.58e-25 | 117 |
cardiovascular system | 2.41e-24 | 109 |
epithelial tube open at both ends | 1.13e-23 | 59 |
Showing 1 to 10 of 83 entries