FFCP PHASE1:Hg19::chr1:9258959..9258977,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC039321_5end | |association_with_transcript=0bp_to_BC039321_5end | ||
|cluster_id=chr1:9258959..9258977,- | |||
|description=CAGE_peak_2_at_BC039321_5end | |description=CAGE_peak_2_at_BC039321_5end | ||
|id=chr1:9258959..9258977,- | |id=chr1:9258959..9258977,- | ||
|ontology_enrichment_celltype=CL:0000188!2.47e-10!9;CL:0002570!3.40e-09!8 | |ontology_enrichment_celltype=CL:0000188!2.47e-10!9;CL:0002570!3.40e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0002570;1.40e-15;8!CL:0002582;2.42e-15;3!CL:0002554;6.24e-11;2!CL:0002583;6.24e-11;2!CL:0000134;6.83e-11;55!CL:0002334;4.35e-10;12!CL:0000723;9.77e-10;61!CL:0000048;4.63e-09;58!CL:0000188;6.12e-09;9!CL:0002540;3.59e-08;6!CL:0000034;6.15e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.88e-15,8;CL:0002582,6.16e-15,3;CL:0002554,4.52e-11,2;CL:0002583,5.53e-11,2;CL:0002334,6.02e-10,12;CL:0000188,6.07e-09,9;CL:0002540,4.48e-08,6;CL:0000048,5.47e-07,427;CL:0000723,8.61e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.55e-17!14;DOID:120!6.40e-07!27 | |ontology_enrichment_disease=DOID:2394!7.55e-17!14;DOID:120!6.40e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.75e-16;14!DOID:120;4.21e-08;27!DOID:193;1.76e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.13e-16,14;DOID:120,3.41e-08,27;DOID:193,1.45e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.60e-14!57;UBERON:0005068!4.60e-14!57;UBERON:0006241!4.60e-14!57;UBERON:0007135!4.60e-14!57;UBERON:0002616!2.40e-13!59;UBERON:0002780!1.44e-12!41;UBERON:0001890!1.44e-12!41;UBERON:0006240!1.44e-12!41;UBERON:0003080!4.09e-12!42;UBERON:0002020!6.92e-11!34;UBERON:0003528!6.92e-11!34;UBERON:0000955!9.92e-11!69;UBERON:0006238!9.92e-11!69;UBERON:0001893!1.07e-10!34;UBERON:0003056!1.34e-10!61;UBERON:0001869!1.46e-10!32;UBERON:0000992!3.04e-10!13;UBERON:0003075!3.58e-10!86;UBERON:0007284!3.58e-10!86;UBERON:0002791!6.94e-10!33;UBERON:0002346!2.59e-09!90;UBERON:0001017!3.02e-09!82;UBERON:0005743!4.32e-09!86;UBERON:0000956!5.93e-09!25;UBERON:0000203!5.93e-09!25;UBERON:0000073!1.03e-08!94;UBERON:0001016!1.03e-08!94;UBERON:0002118!4.25e-08!5;UBERON:0004532!4.25e-08!5;UBERON:0000991!5.03e-08!21;UBERON:0009196!5.03e-08!21;UBERON:0009117!5.03e-08!21;UBERON:0005564!5.03e-08!21;UBERON:0002619!5.32e-08!22;UBERON:0000033!6.00e-08!123;UBERON:0000200!7.13e-08!6;UBERON:0001950!7.79e-08!20;UBERON:0000153!1.20e-07!129;UBERON:0007811!1.20e-07!129;UBERON:0007023!1.47e-07!115;UBERON:0004176!1.62e-07!22;UBERON:0002119!4.47e-07!4;UBERON:0004531!4.47e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!4.60e-14!57;UBERON:0005068!4.60e-14!57;UBERON:0006241!4.60e-14!57;UBERON:0007135!4.60e-14!57;UBERON:0002616!2.40e-13!59;UBERON:0002780!1.44e-12!41;UBERON:0001890!1.44e-12!41;UBERON:0006240!1.44e-12!41;UBERON:0003080!4.09e-12!42;UBERON:0002020!6.92e-11!34;UBERON:0003528!6.92e-11!34;UBERON:0000955!9.92e-11!69;UBERON:0006238!9.92e-11!69;UBERON:0001893!1.07e-10!34;UBERON:0003056!1.34e-10!61;UBERON:0001869!1.46e-10!32;UBERON:0000992!3.04e-10!13;UBERON:0003075!3.58e-10!86;UBERON:0007284!3.58e-10!86;UBERON:0002791!6.94e-10!33;UBERON:0002346!2.59e-09!90;UBERON:0001017!3.02e-09!82;UBERON:0005743!4.32e-09!86;UBERON:0000956!5.93e-09!25;UBERON:0000203!5.93e-09!25;UBERON:0000073!1.03e-08!94;UBERON:0001016!1.03e-08!94;UBERON:0002118!4.25e-08!5;UBERON:0004532!4.25e-08!5;UBERON:0000991!5.03e-08!21;UBERON:0009196!5.03e-08!21;UBERON:0009117!5.03e-08!21;UBERON:0005564!5.03e-08!21;UBERON:0002619!5.32e-08!22;UBERON:0000033!6.00e-08!123;UBERON:0000200!7.13e-08!6;UBERON:0001950!7.79e-08!20;UBERON:0000153!1.20e-07!129;UBERON:0007811!1.20e-07!129;UBERON:0007023!1.47e-07!115;UBERON:0004176!1.62e-07!22;UBERON:0002119!4.47e-07!4;UBERON:0004531!4.47e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.88e-12;14!UBERON:0002119;1.23e-11;4!UBERON:0002072;1.26e-09;5!UBERON:0000992;2.72e-09;13!UBERON:0000991;5.93e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.38e-12,14;UBERON:0002119,1.38e-11,4;UBERON:0002072,1.25e-09,5;UBERON:0000992,2.30e-09,13;UBERON:0000991,5.05e-08,21;UBERON:0009196,5.05e-08,21;UBERON:0009117,5.05e-08,21;UBERON:0005564,5.05e-08,21;UBERON:0004176,1.25e-07,22 | |||
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| ||
|short_description=p2@BC039321 | |short_description=p2@BC039321 | ||
}} | }} |
Latest revision as of 11:19, 28 July 2015
Short description: | p2@BC039321 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BC039321_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC039321_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.88e-15 | 8 |
visceral preadipocyte | 6.16e-15 | 3 |
fibroblast of lymphatic vessel | 4.52e-11 | 2 |
subcutaneous preadipocyte | 5.53e-11 | 2 |
preadipocyte | 6.02e-10 | 12 |
cell of skeletal muscle | 6.07e-09 | 9 |
mesenchymal stem cell of the bone marrow | 4.48e-08 | 6 |
multi fate stem cell | 5.47e-07 | 427 |
somatic stem cell | 8.61e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.38e-12 | 14 |
left ovary | 1.38e-11 | 4 |
hypodermis | 1.25e-09 | 5 |
female gonad | 2.30e-09 | 13 |
gonad | 5.05e-08 | 21 |
indifferent external genitalia | 5.05e-08 | 21 |
indifferent gonad | 5.05e-08 | 21 |
gonad primordium | 5.05e-08 | 21 |
external genitalia | 1.25e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.13e-16 | 14 |
female reproductive organ cancer | 3.41e-08 | 27 |
reproductive organ cancer | 1.45e-07 | 29 |