FFCP PHASE1:Hg19::chr1:9262685..9262699,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000437157_5end | |association_with_transcript=-7bp_to_ENST00000437157_5end | ||
|cluster_id=chr1:9262685..9262699,- | |||
|coexpression_cluster_id=C4008 | |||
|description=CAGE_peak_1_at_ENST00000437157_5end | |description=CAGE_peak_1_at_ENST00000437157_5end | ||
|id=chr1:9262685..9262699,- | |id=chr1:9262685..9262699,- | ||
|ontology_enrichment_celltype=CL:0000055!3.53e-15!180;CL:0000680!1.39e-14!57;CL:0000056!1.39e-14!57;CL:0000355!1.39e-14!57;CL:0000183!2.82e-14!59;CL:0000187!4.97e-13!54;CL:0000393!8.86e-11!60;CL:0000211!8.86e-11!60;CL:0000048!2.93e-10!430;CL:0000723!1.07e-09!436;CL:0000034!5.60e-09!444;CL:0000188!2.01e-08!9;CL:0000057!2.68e-08!75;CL:0000192!3.99e-08!42;CL:0000514!3.99e-08!42;CL:0002570!2.00e-07!8 | |ontology_enrichment_celltype=CL:0000055!3.53e-15!180;CL:0000680!1.39e-14!57;CL:0000056!1.39e-14!57;CL:0000355!1.39e-14!57;CL:0000183!2.82e-14!59;CL:0000187!4.97e-13!54;CL:0000393!8.86e-11!60;CL:0000211!8.86e-11!60;CL:0000048!2.93e-10!430;CL:0000723!1.07e-09!436;CL:0000034!5.60e-09!444;CL:0000188!2.01e-08!9;CL:0000057!2.68e-08!75;CL:0000192!3.99e-08!42;CL:0000514!3.99e-08!42;CL:0002570!2.00e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000134;2.47e-15;55!CL:0000723;5.50e-14;61!CL:0000048;1.85e-13;58!CL:0002540;5.04e-12;6!CL:0000034;9.33e-11;69!CL:0002582;1.43e-10;3!CL:0002092;7.76e-10;10!CL:0002570;1.73e-09;8!CL:0002583;9.21e-08;2!CL:0002554;4.73e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,4.49e-12,6;CL:0002582,1.36e-10,3;CL:0002092,7.97e-10,10;CL:0002570,1.85e-09,8;CL:0002583,9.52e-08,2;CL:0000048,2.82e-07,427;CL:0002554,3.77e-07,2;CL:0000723,5.18e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.56e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-25;14!DOID:120;4.57e-12;27!DOID:193;4.63e-11;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.47e-25,14;DOID:120,5.31e-12,27;DOID:193,5.33e-11,29 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.29e-16!70;UBERON:0000914!3.36e-15!83;UBERON:0002329!3.36e-15!83;UBERON:0003077!3.36e-15!83;UBERON:0003059!3.36e-15!83;UBERON:0007282!3.36e-15!83;UBERON:0009618!3.36e-15!83;UBERON:0007285!3.36e-15!83;UBERON:0002616!1.25e-14!59;UBERON:0002385!4.69e-13!63;UBERON:0001015!4.69e-13!63;UBERON:0000383!4.69e-13!63;UBERON:0000486!5.60e-13!82;UBERON:0001134!6.21e-13!61;UBERON:0002036!6.21e-13!61;UBERON:0003082!6.21e-13!61;UBERON:0001049!1.93e-12!57;UBERON:0005068!1.93e-12!57;UBERON:0006241!1.93e-12!57;UBERON:0007135!1.93e-12!57;UBERON:0000955!1.51e-11!69;UBERON:0006238!1.51e-11!69;UBERON:0001017!9.40e-11!82;UBERON:0005743!2.37e-10!86;UBERON:0000073!3.49e-10!94;UBERON:0001016!3.49e-10!94;UBERON:0000119!4.71e-10!312;UBERON:0003075!5.31e-10!86;UBERON:0007284!5.31e-10!86;UBERON:0000475!8.22e-10!365;UBERON:0002020!1.34e-09!34;UBERON:0003528!1.34e-09!34;UBERON:0002780!1.99e-09!41;UBERON:0001890!1.99e-09!41;UBERON:0006240!1.99e-09!41;UBERON:0001893!2.29e-09!34;UBERON:0001869!2.36e-09!32;UBERON:0002346!4.38e-09!90;UBERON:0003080!4.74e-09!42;UBERON:0000033!5.13e-09!123;UBERON:0000483!6.03e-09!309;UBERON:0001950!1.20e-08!20;UBERON:0002791!1.46e-08!33;UBERON:0000153!1.82e-08!129;UBERON:0007811!1.82e-08!129;UBERON:0000992!7.49e-08!13;UBERON:0002118!9.29e-08!5;UBERON:0004532!9.29e-08!5;UBERON:0000200!1.02e-07!6;UBERON:0004121!1.47e-07!169;UBERON:0002619!1.51e-07!22;UBERON:0003056!2.60e-07!61;UBERON:0000956!2.83e-07!25;UBERON:0000203!2.83e-07!25;UBERON:0000924!4.52e-07!173;UBERON:0006601!4.52e-07!173;UBERON:0000479!5.52e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.52e-18;13!UBERON:0002118;4.50e-16;5!UBERON:0002119;5.65e-13;4!UBERON:0000200;1.31e-11;6!UBERON:0000991;1.25e-10;21!UBERON:0001950;2.27e-09;20!UBERON:0002619;2.05e-08;22!UBERON:0002371;4.38e-08;12!UBERON:0001013;2.70e-07;14!UBERON:0000956;2.92e-07;25!UBERON:0000203;2.92e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.34e-18,13;UBERON:0002118,5.95e-16,5;UBERON:0002119,6.49e-13,4;UBERON:0000200,6.73e-12,6;UBERON:0000991,1.47e-10,21;UBERON:0009196,1.47e-10,21;UBERON:0009117,1.47e-10,21;UBERON:0005564,1.47e-10,21;UBERON:0004176,5.37e-10,22;UBERON:0001950,1.68e-09,20;UBERON:0002619,1.57e-08,22;UBERON:0000956,2.32e-07,25;UBERON:0000203,2.32e-07,25;UBERON:0001013,2.79e-07,14;UBERON:0001869,7.78e-07,32 | |||
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| ||
|short_description=p1@ENST00000437157 | |short_description=p1@ENST00000437157 | ||
}} | }} |
Latest revision as of 11:19, 28 July 2015
Short description: | p1@ENST00000437157 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000437157_5end |
Coexpression cluster: | C4008_mesenchymal_Preadipocyte_liposarcoma_Mesenchymal_pons_Myoblast_Skeletal |
Association with transcript: | -7bp_to_ENST00000437157_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 4.49e-12 | 6 |
visceral preadipocyte | 1.36e-10 | 3 |
bone marrow cell | 7.97e-10 | 10 |
mesenchymal stem cell of adipose | 1.85e-09 | 8 |
subcutaneous preadipocyte | 9.52e-08 | 2 |
multi fate stem cell | 2.82e-07 | 427 |
fibroblast of lymphatic vessel | 3.77e-07 | 2 |
somatic stem cell | 5.18e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.34e-18 | 13 |
right ovary | 5.95e-16 | 5 |
left ovary | 6.49e-13 | 4 |
gyrus | 6.73e-12 | 6 |
gonad | 1.47e-10 | 21 |
indifferent external genitalia | 1.47e-10 | 21 |
indifferent gonad | 1.47e-10 | 21 |
gonad primordium | 1.47e-10 | 21 |
external genitalia | 5.37e-10 | 22 |
neocortex | 1.68e-09 | 20 |
regional part of cerebral cortex | 1.57e-08 | 22 |
cerebral cortex | 2.32e-07 | 25 |
pallium | 2.32e-07 | 25 |
adipose tissue | 2.79e-07 | 14 |
cerebral hemisphere | 7.78e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.47e-25 | 14 |
female reproductive organ cancer | 5.31e-12 | 27 |
reproductive organ cancer | 5.33e-11 | 29 |