FFCP PHASE1:Hg19::chr1:9302789..9302798,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:9302789..9302798,+ | |||
|description=CAGE_peak_at_chr1:9302789..9302798,+ | |description=CAGE_peak_at_chr1:9302789..9302798,+ | ||
|id=chr1:9302789..9302798,+ | |id=chr1:9302789..9302798,+ | ||
|ontology_enrichment_celltype=CL:0000515!4.05e-11!4 | |ontology_enrichment_celltype=CL:0000515!4.05e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0002600;9.07e-18;2!CL:0002563;1.12e-09;4!CL:0002569;8.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,1.07e-17,2;CL:0002563,1.12e-09,4;CL:0002569,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.05e-34;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-15!115;UBERON:0001829!6.72e-11!2;UBERON:0001044!7.49e-08!6;UBERON:0003293!7.49e-08!6;UBERON:0003294!7.49e-08!6;UBERON:0010047!7.49e-08!6;UBERON:0000167!7.49e-08!6;UBERON:0004921!1.74e-07!129;UBERON:0004185!1.74e-07!129;UBERON:0000077!2.14e-07!130;UBERON:0003104!2.97e-07!238;UBERON:0009142!2.97e-07!238;UBERON:0004119!3.34e-07!169;UBERON:0000925!3.34e-07!169;UBERON:0006595!3.34e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!1.47e-15!115;UBERON:0001829!6.72e-11!2;UBERON:0001044!7.49e-08!6;UBERON:0003293!7.49e-08!6;UBERON:0003294!7.49e-08!6;UBERON:0010047!7.49e-08!6;UBERON:0000167!7.49e-08!6;UBERON:0004921!1.74e-07!129;UBERON:0004185!1.74e-07!129;UBERON:0000077!2.14e-07!130;UBERON:0003104!2.97e-07!238;UBERON:0009142!2.97e-07!238;UBERON:0004119!3.34e-07!169;UBERON:0000925!3.34e-07!169;UBERON:0006595!3.34e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001736;5.05e-34;1!UBERON:0000996;5.05e-34;1!UBERON:0001829;9.07e-18;2!UBERON:0001242;1.12e-09;4!UBERON:0001262;1.12e-09;4!UBERON:0004786;1.12e-09;4!UBERON:0004808;1.12e-09;4!UBERON:0001277;1.12e-09;4!UBERON:0001044;8.48e-07;6!UBERON:0003293;8.48e-07;6!UBERON:0003294;8.48e-07;6!UBERON:0010047;8.48e-07;6!UBERON:0003408;8.48e-07;6!UBERON:0003422;8.48e-07;6!UBERON:0000167;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,2.58e-34,1;UBERON:0006298,2.58e-34,1;UBERON:0000996,3.61e-34,1;UBERON:0001829,6.48e-18,2;UBERON:0001242,1.12e-09,4;UBERON:0001262,1.12e-09,4;UBERON:0004786,1.12e-09,4;UBERON:0004808,1.12e-09,4;UBERON:0001277,1.12e-09,4;UBERON:0004921,2.19e-07,118;UBERON:0001044,7.58e-07,6;UBERON:0003293,7.58e-07,6;UBERON:0003294,7.58e-07,6;UBERON:0010047,7.58e-07,6;UBERON:0000167,7.58e-07,6;UBERON:0003422,9.49e-07,6 | |||
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| ||
|short_description=p@chr1:9302789..9302798,+ | |short_description=p@chr1:9302789..9302798,+ | ||
}} | }} |
Latest revision as of 11:21, 28 July 2015
Short description: | p@chr1:9302789..9302798, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:9302789..9302798, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 1.07e-17 | 2 |
intestinal epithelial cell | 1.12e-09 | 4 |
mesenchymal stem cell of umbilical cord | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 2.58e-34 | 1 |
submandibular gland primordium | 2.58e-34 | 1 |
vagina | 3.61e-34 | 1 |
major salivary gland | 6.48e-18 | 2 |
intestinal mucosa | 1.12e-09 | 4 |
wall of intestine | 1.12e-09 | 4 |
gastrointestinal system mucosa | 1.12e-09 | 4 |
gastrointestinal system epithelium | 1.12e-09 | 4 |
intestinal epithelium | 1.12e-09 | 4 |
subdivision of digestive tract | 2.19e-07 | 118 |
saliva-secreting gland | 7.58e-07 | 6 |
gland of oral region | 7.58e-07 | 6 |
gland of foregut | 7.58e-07 | 6 |
oral gland | 7.58e-07 | 6 |
oral cavity | 7.58e-07 | 6 |
mesenchyme of umbilical cord | 9.49e-07 | 6 |