FFCP PHASE1:Hg19::chr20:23168592..23168636,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002wsw.1_5end | |association_with_transcript=0bp_to_uc002wsw.1_5end | ||
|cluster_id=chr20:23168592..23168636,+ | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_1_at_uc002wsw.1_5end | |description=CAGE_peak_1_at_uc002wsw.1_5end | ||
|id=chr20:23168592..23168636,+ | |id=chr20:23168592..23168636,+ | ||
|ontology_enrichment_celltype=CL:0000453!2.12e-07!5 | |ontology_enrichment_celltype=CL:0000453!2.12e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;9.07e-12;2!CL:0001016;9.07e-12;2!CL:0000575;4.29e-11;2!CL:0000453;4.68e-10;5!CL:0000319;8.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,8.61e-12,2;CL:0001016,8.61e-12,2;CL:0000575,4.30e-11,2;CL:0000453,4.68e-10,5;CL:0000319,8.34e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;8.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-24!115;UBERON:0002619!4.39e-18!22;UBERON:0001950!4.99e-18!20;UBERON:0000956!2.78e-15!25;UBERON:0000203!2.78e-15!25;UBERON:0001869!1.09e-14!32;UBERON:0002020!1.77e-14!34;UBERON:0003528!1.77e-14!34;UBERON:0002780!2.34e-14!41;UBERON:0001890!2.34e-14!41;UBERON:0006240!2.34e-14!41;UBERON:0003080!7.70e-14!42;UBERON:0001893!1.85e-13!34;UBERON:0001049!6.68e-13!57;UBERON:0005068!6.68e-13!57;UBERON:0006241!6.68e-13!57;UBERON:0007135!6.68e-13!57;UBERON:0002791!1.19e-12!33;UBERON:0001737!3.46e-11!9;UBERON:0001017!9.96e-11!82;UBERON:0000955!1.41e-10!69;UBERON:0006238!1.41e-10!69;UBERON:0005743!1.52e-10!86;UBERON:0003075!2.09e-10!86;UBERON:0007284!2.09e-10!86;UBERON:0003056!4.05e-10!61;UBERON:0002346!1.64e-09!90;UBERON:0000073!1.96e-09!94;UBERON:0001016!1.96e-09!94;UBERON:0001557!2.62e-09!19;UBERON:0002616!2.77e-09!59;UBERON:0000200!1.44e-08!6;UBERON:0001871!1.54e-08!7;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0000033!4.02e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-24!115;UBERON:0002619!4.39e-18!22;UBERON:0001950!4.99e-18!20;UBERON:0000956!2.78e-15!25;UBERON:0000203!2.78e-15!25;UBERON:0001869!1.09e-14!32;UBERON:0002020!1.77e-14!34;UBERON:0003528!1.77e-14!34;UBERON:0002780!2.34e-14!41;UBERON:0001890!2.34e-14!41;UBERON:0006240!2.34e-14!41;UBERON:0003080!7.70e-14!42;UBERON:0001893!1.85e-13!34;UBERON:0001049!6.68e-13!57;UBERON:0005068!6.68e-13!57;UBERON:0006241!6.68e-13!57;UBERON:0007135!6.68e-13!57;UBERON:0002791!1.19e-12!33;UBERON:0001737!3.46e-11!9;UBERON:0001017!9.96e-11!82;UBERON:0000955!1.41e-10!69;UBERON:0006238!1.41e-10!69;UBERON:0005743!1.52e-10!86;UBERON:0003075!2.09e-10!86;UBERON:0007284!2.09e-10!86;UBERON:0003056!4.05e-10!61;UBERON:0002346!1.64e-09!90;UBERON:0000073!1.96e-09!94;UBERON:0001016!1.96e-09!94;UBERON:0001557!2.62e-09!19;UBERON:0002616!2.77e-09!59;UBERON:0000200!1.44e-08!6;UBERON:0001871!1.54e-08!7;UBERON:0000153!2.32e-07!129;UBERON:0007811!2.32e-07!129;UBERON:0000033!4.02e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.07e-12;4!UBERON:0010133;3.07e-12;4!UBERON:0001905;9.81e-12;2!UBERON:0002757;9.81e-12;2!UBERON:0010134;9.81e-12;2!UBERON:0005408;9.81e-12;2!UBERON:0001899;9.81e-12;2!UBERON:0001870;1.66e-07;3!UBERON:0001894;3.52e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.57e-12,4;UBERON:0010133,3.57e-12,4;UBERON:0001905,9.57e-12,2;UBERON:0002757,9.57e-12,2;UBERON:0010134,9.57e-12,2;UBERON:0005408,9.57e-12,2;UBERON:0001899,9.57e-12,2;UBERON:0003056,1.62e-07,61;UBERON:0001870,1.99e-07,3;UBERON:0001894,3.84e-07,7;UBERON:0006222,3.84e-07,7 | |||
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|short_description=p1@uc002wsw.1 | |short_description=p1@uc002wsw.1 | ||
}} | }} |
Latest revision as of 12:31, 28 July 2015
Short description: | p1@uc002wsw.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002wsw.1_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 0bp_to_uc002wsw.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.61e-12 | 2 |
immature CD1a-positive Langerhans cell | 8.61e-12 | 2 |
corneal epithelial cell | 4.30e-11 | 2 |
Langerhans cell | 4.68e-10 | 5 |
mucus secreting cell | 8.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 3.57e-12 | 4 |
neuroendocrine gland | 3.57e-12 | 4 |
pineal body | 9.57e-12 | 2 |
regional part of epithalamus | 9.57e-12 | 2 |
secretory circumventricular organ | 9.57e-12 | 2 |
circumventricular organ | 9.57e-12 | 2 |
epithalamus | 9.57e-12 | 2 |
pre-chordal neural plate | 1.62e-07 | 61 |
frontal cortex | 1.99e-07 | 3 |
diencephalon | 3.84e-07 | 7 |
future diencephalon | 3.84e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.34e-07 | 1 |