FFCP PHASE1:Hg19::chr20:44640866..44640875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:44640866..44640875,- | |||
|coexpression_cluster_id=C433 | |coexpression_cluster_id=C433 | ||
|description=CAGE_peak_at_chr20:44640866..44640875,- | |description=CAGE_peak_at_chr20:44640866..44640875,- | ||
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|ontology_enrichment_celltype=CL:0000235!5.54e-65!10;CL:0000766!1.22e-14!76;CL:0002194!1.25e-13!63;CL:0000576!1.25e-13!63;CL:0000040!1.25e-13!63;CL:0000559!1.25e-13!63;CL:0002009!3.32e-13!65;CL:0000839!2.97e-12!70;CL:0000557!4.44e-12!71;CL:0002583!2.99e-10!2;CL:0000763!8.04e-10!112;CL:0000049!8.04e-10!112;CL:0000738!9.26e-08!140;CL:0000775!2.79e-07!3;CL:0002087!4.31e-07!119;CL:0002031!8.62e-07!124 | |ontology_enrichment_celltype=CL:0000235!5.54e-65!10;CL:0000766!1.22e-14!76;CL:0002194!1.25e-13!63;CL:0000576!1.25e-13!63;CL:0000040!1.25e-13!63;CL:0000559!1.25e-13!63;CL:0002009!3.32e-13!65;CL:0000839!2.97e-12!70;CL:0000557!4.44e-12!71;CL:0002583!2.99e-10!2;CL:0000763!8.04e-10!112;CL:0000049!8.04e-10!112;CL:0000738!9.26e-08!140;CL:0000775!2.79e-07!3;CL:0002087!4.31e-07!119;CL:0002031!8.62e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.41e-163;6!CL:0000473;2.84e-22;39!CL:0000234;2.84e-22;39!CL:0000766;3.45e-08;69 | |ontology_enrichment_celltype_v019=CL:0000235;5.41e-163;6!CL:0000473;2.84e-22;39!CL:0000234;2.84e-22;39!CL:0000766;3.45e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.41e-163,6;CL:0000473,3.34e-21,48;CL:0000234,3.34e-21,48;CL:0002194,4.10e-17,59;CL:0000576,4.10e-17,59;CL:0000040,4.10e-17,59;CL:0000559,4.10e-17,59;CL:0002009,1.38e-16,61;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002087,3.65e-09,115;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.31e-11!102;UBERON:0003061!8.31e-11!102;UBERON:0002371!1.07e-10!80;UBERON:0001474!6.17e-10!86;UBERON:0002193!8.35e-10!112;UBERON:0002405!1.55e-09!115;UBERON:0004765!2.03e-08!101;UBERON:0001434!2.03e-08!101;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3 | |ontology_enrichment_uberon=UBERON:0002390!8.31e-11!102;UBERON:0003061!8.31e-11!102;UBERON:0002371!1.07e-10!80;UBERON:0001474!6.17e-10!86;UBERON:0002193!8.35e-10!112;UBERON:0002405!1.55e-09!115;UBERON:0004765!2.03e-08!101;UBERON:0001434!2.03e-08!101;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
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|short_description=p@chr20:44640866..44640875,- | |short_description=p@chr20:44640866..44640875,- | ||
}} | }} |
Latest revision as of 14:38, 28 July 2015
Short description: | p@chr20:44640866..44640875, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:44640866..44640875, - |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.41e-163 | 6 |
defensive cell | 3.34e-21 | 48 |
phagocyte | 3.34e-21 | 48 |
monopoietic cell | 4.10e-17 | 59 |
monocyte | 4.10e-17 | 59 |
monoblast | 4.10e-17 | 59 |
promonocyte | 4.10e-17 | 59 |
macrophage dendritic cell progenitor | 1.38e-16 | 61 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
nongranular leukocyte | 3.65e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |