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FFCP PHASE1:Hg19::chr20:60953877..60953897,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C226|description=CAGE_peak_at_chr20:60953877..60953897,-|id=chr20:60953877..60953897,-|ontology_enrichment_celltype=CL:0002076!1.59e-40!43;CL:0000223!9.36e-32!59;CL:0002368!2.56e-27!13;CL:0000066!3.08e-23!254;CL:0002202!1.29e-17!9;CL:0002632!1.29e-17!9;CL:0002251!1.84e-15!21;CL:0002159!4.50e-15!13;CL:0000622!1.35e-13!5;CL:0000244!1.42e-11!4;CL:0000731!1.42e-11!4;CL:0000154!2.97e-11!6;CL:0000150!4.60e-10!9;CL:0000220!2.45e-09!246;CL:0002321!3.55e-09!248;CL:0002621!4.71e-09!3;CL:0002328!7.18e-09!3;CL:0000076!7.35e-09!62;CL:0000068!9.56e-09!3;CL:0000069!9.56e-09!3;CL:0000307!9.56e-09!3;CL:0000377!9.56e-09!3;CL:0002623!1.12e-08!3;CL:0002166!2.94e-08!3|ontology_enrichment_celltype_v019=CL:0002076;6.44e-33;42!CL:0002368;1.23e-26;13!CL:0002251;7.33e-21;20!CL:0000622;2.79e-18;5!CL:0002621;3.24e-17;3!CL:0000154;2.90e-15;6!CL:0002159;8.63e-14;14!CL:0000244;1.13e-13;4!CL:0000731;1.13e-13;4!CL:0000317;2.22e-12;2!CL:1000448;2.22e-12;2!CL:0002308;2.22e-12;2!CL:0002140;2.22e-12;2!CL:0000575;8.09e-12;2!CL:0002202;2.23e-10;9!CL:0002632;2.23e-10;9!CL:0000150;3.20e-10;9!CL:0002328;8.72e-09;3!CL:0000307;2.08e-08;3!CL:0002623;2.08e-08;3!CL:0002252;9.77e-07;1|ontology_enrichment_celltype_v019_2=CL:0002076,1.67e-43,42;CL:0000223,2.26e-30,58;CL:0002368,8.46e-27,13;CL:0002251,7.10e-21,20;CL:0000066,1.76e-19,253;CL:0000622,3.50e-18,5;CL:0002621,1.61e-17,3;CL:0000154,3.50e-15,6;CL:0000244,8.60e-14,4;CL:0000731,8.60e-14,4;CL:0002159,8.85e-14,14;CL:0000317,2.79e-12,2;CL:1000448,2.79e-12,2;CL:0002308,2.79e-12,2;CL:0002140,2.79e-12,2;CL:0000575,6.86e-12,2;CL:0002202,2.12e-10,9;CL:0002632,2.12e-10,9;CL:0000150,3.62e-10,9;CL:0002321,1.73e-09,250;CL:0002328,7.21e-09,3;CL:0002623,2.16e-08,3;CL:0000068,2.33e-08,3;CL:0000069,2.33e-08,3;CL:0000307,2.33e-08,3;CL:0000377,2.33e-08,3|ontology_enrichment_development_v019=CL:0000223;2.04e-15;58!CL:0000377;2.08e-08;3|ontology_enrichment_disease=DOID:1749!2.23e-13!14|ontology_enrichment_disease_v019=DOID:3112;2.58e-07;1!DOID:3151;9.77e-07;1!DOID:3149;9.77e-07;1|ontology_enrichment_disease_v019_2=DOID:3112,2.82e-07,1;DOID:3151,7.15e-07,1;DOID:3149,7.15e-07,1|ontology_enrichment_uberon=UBERON:0001004!1.45e-17!72;UBERON:0004119!1.16e-13!169;UBERON:0000925!1.16e-13!169;UBERON:0006595!1.16e-13!169;UBERON:0007196!1.71e-13!14;UBERON:0001558!1.71e-13!14;UBERON:0000166!4.26e-13!21;UBERON:0000161!3.47e-11!35;UBERON:0000065!3.53e-11!53;UBERON:0000165!6.41e-11!28;UBERON:0000930!6.41e-11!28;UBERON:0005157!8.17e-10!51;UBERON:0000365!3.08e-09!5;UBERON:0001949!4.71e-09!3;UBERON:0004815!7.18e-09!3;UBERON:0002031!7.18e-09!3;UBERON:0003729!1.14e-08!5;UBERON:0001444!1.25e-08!48;UBERON:0005153!1.91e-08!37;UBERON:0005178!3.75e-08!34;UBERON:0002224!3.75e-08!34;UBERON:0005181!7.62e-08!35;UBERON:0005910!1.12e-07!6;UBERON:0003102!1.49e-07!95;UBERON:0001007!1.65e-07!155;UBERON:0001555!1.65e-07!155;UBERON:0007026!1.65e-07!155|ontology_enrichment_uberon_v019=UBERON:0000161;1.77e-17;19!UBERON:0000166;1.77e-17;19!UBERON:0001949;3.24e-17;3!UBERON:0000486;1.74e-16;12!UBERON:0003729;8.33e-15;13!UBERON:0003343;4.74e-13;4!UBERON:0004785;4.74e-13;4!UBERON:0002419;2.22e-12;2!UBERON:0007771;2.22e-12;2!UBERON:0003297;2.22e-12;2!UBERON:0001821;2.22e-12;2!UBERON:0003487;2.22e-12;2!UBERON:0001820;2.22e-12;2!UBERON:0000165;1.76e-11;28!UBERON:0000365;4.91e-11;5!UBERON:0000344;1.97e-09;20!UBERON:0005910;2.85e-09;6!UBERON:0000974;7.29e-09;6!UBERON:0004815;8.72e-09;3!UBERON:0002031;8.72e-09;3!UBERON:0005911;6.03e-08;36!UBERON:0001004;7.40e-08;65!UBERON:0003929;1.16e-07;7!UBERON:0003350;9.35e-07;8!UBERON:0001828;9.35e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.61e-17,3;UBERON:0001004,6.14e-16,74;UBERON:0000166,5.63e-15,22;UBERON:0003729,7.19e-15,13;UBERON:0003343,6.22e-13,4;UBERON:0004785,6.22e-13,4;UBERON:0002419,2.79e-12,2;UBERON:0007771,2.79e-12,2;UBERON:0003297,2.79e-12,2;UBERON:0001821,2.79e-12,2;UBERON:0003487,2.79e-12,2;UBERON:0001820,2.79e-12,2;UBERON:0005089,2.79e-12,2;UBERON:0005088,2.79e-12,2;UBERON:0004119,3.79e-12,160;UBERON:0000925,3.79e-12,160;UBERON:0006595,3.79e-12,160;UBERON:0000365,3.95e-11,5;UBERON:0000165,4.48e-11,29;UBERON:0000930,4.48e-11,29;UBERON:0000161,6.34e-11,36;UBERON:0003102,7.32e-11,99;UBERON:0000033,8.27e-10,56;UBERON:0001444,1.73e-09,49;UBERON:0000344,1.79e-09,20;UBERON:0005910,2.38e-09,6;UBERON:0004815,7.21e-09,3;UBERON:0002031,7.21e-09,3;UBERON:0000153,1.15e-08,62;UBERON:0007811,1.15e-08,62;UBERON:0000065,6.00e-07,54;UBERON:0003350,7.27e-07,8;UBERON:0001828,7.27e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,2.71085326900425,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr20:60953877..60953897,-
|coexpression_cluster_id=C226
|description=CAGE_peak_at_chr20:60953877..60953897,-
|id=chr20:60953877..60953897,-
|ontology_enrichment_celltype=CL:0002076!1.59e-40!43;CL:0000223!9.36e-32!59;CL:0002368!2.56e-27!13;CL:0000066!3.08e-23!254;CL:0002202!1.29e-17!9;CL:0002632!1.29e-17!9;CL:0002251!1.84e-15!21;CL:0002159!4.50e-15!13;CL:0000622!1.35e-13!5;CL:0000244!1.42e-11!4;CL:0000731!1.42e-11!4;CL:0000154!2.97e-11!6;CL:0000150!4.60e-10!9;CL:0000220!2.45e-09!246;CL:0002321!3.55e-09!248;CL:0002621!4.71e-09!3;CL:0002328!7.18e-09!3;CL:0000076!7.35e-09!62;CL:0000068!9.56e-09!3;CL:0000069!9.56e-09!3;CL:0000307!9.56e-09!3;CL:0000377!9.56e-09!3;CL:0002623!1.12e-08!3;CL:0002166!2.94e-08!3
|ontology_enrichment_celltype_v019=CL:0002076;6.44e-33;42!CL:0002368;1.23e-26;13!CL:0002251;7.33e-21;20!CL:0000622;2.79e-18;5!CL:0002621;3.24e-17;3!CL:0000154;2.90e-15;6!CL:0002159;8.63e-14;14!CL:0000244;1.13e-13;4!CL:0000731;1.13e-13;4!CL:0000317;2.22e-12;2!CL:1000448;2.22e-12;2!CL:0002308;2.22e-12;2!CL:0002140;2.22e-12;2!CL:0000575;8.09e-12;2!CL:0002202;2.23e-10;9!CL:0002632;2.23e-10;9!CL:0000150;3.20e-10;9!CL:0002328;8.72e-09;3!CL:0000307;2.08e-08;3!CL:0002623;2.08e-08;3!CL:0002252;9.77e-07;1
|ontology_enrichment_celltype_v019_2=CL:0002076,1.67e-43,42;CL:0000223,2.26e-30,58;CL:0002368,8.46e-27,13;CL:0002251,7.10e-21,20;CL:0000066,1.76e-19,253;CL:0000622,3.50e-18,5;CL:0002621,1.61e-17,3;CL:0000154,3.50e-15,6;CL:0000244,8.60e-14,4;CL:0000731,8.60e-14,4;CL:0002159,8.85e-14,14;CL:0000317,2.79e-12,2;CL:1000448,2.79e-12,2;CL:0002308,2.79e-12,2;CL:0002140,2.79e-12,2;CL:0000575,6.86e-12,2;CL:0002202,2.12e-10,9;CL:0002632,2.12e-10,9;CL:0000150,3.62e-10,9;CL:0002321,1.73e-09,250;CL:0002328,7.21e-09,3;CL:0002623,2.16e-08,3;CL:0000068,2.33e-08,3;CL:0000069,2.33e-08,3;CL:0000307,2.33e-08,3;CL:0000377,2.33e-08,3
|ontology_enrichment_development_v019=CL:0000223;2.04e-15;58!CL:0000377;2.08e-08;3
|ontology_enrichment_disease=DOID:1749!2.23e-13!14
|ontology_enrichment_disease_v019=DOID:3112;2.58e-07;1!DOID:3151;9.77e-07;1!DOID:3149;9.77e-07;1
|ontology_enrichment_disease_v019_2=DOID:3112,2.82e-07,1;DOID:3151,7.15e-07,1;DOID:3149,7.15e-07,1
|ontology_enrichment_uberon=UBERON:0001004!1.45e-17!72;UBERON:0004119!1.16e-13!169;UBERON:0000925!1.16e-13!169;UBERON:0006595!1.16e-13!169;UBERON:0007196!1.71e-13!14;UBERON:0001558!1.71e-13!14;UBERON:0000166!4.26e-13!21;UBERON:0000161!3.47e-11!35;UBERON:0000065!3.53e-11!53;UBERON:0000165!6.41e-11!28;UBERON:0000930!6.41e-11!28;UBERON:0005157!8.17e-10!51;UBERON:0000365!3.08e-09!5;UBERON:0001949!4.71e-09!3;UBERON:0004815!7.18e-09!3;UBERON:0002031!7.18e-09!3;UBERON:0003729!1.14e-08!5;UBERON:0001444!1.25e-08!48;UBERON:0005153!1.91e-08!37;UBERON:0005178!3.75e-08!34;UBERON:0002224!3.75e-08!34;UBERON:0005181!7.62e-08!35;UBERON:0005910!1.12e-07!6;UBERON:0003102!1.49e-07!95;UBERON:0001007!1.65e-07!155;UBERON:0001555!1.65e-07!155;UBERON:0007026!1.65e-07!155
|ontology_enrichment_uberon_v019=UBERON:0000161;1.77e-17;19!UBERON:0000166;1.77e-17;19!UBERON:0001949;3.24e-17;3!UBERON:0000486;1.74e-16;12!UBERON:0003729;8.33e-15;13!UBERON:0003343;4.74e-13;4!UBERON:0004785;4.74e-13;4!UBERON:0002419;2.22e-12;2!UBERON:0007771;2.22e-12;2!UBERON:0003297;2.22e-12;2!UBERON:0001821;2.22e-12;2!UBERON:0003487;2.22e-12;2!UBERON:0001820;2.22e-12;2!UBERON:0000165;1.76e-11;28!UBERON:0000365;4.91e-11;5!UBERON:0000344;1.97e-09;20!UBERON:0005910;2.85e-09;6!UBERON:0000974;7.29e-09;6!UBERON:0004815;8.72e-09;3!UBERON:0002031;8.72e-09;3!UBERON:0005911;6.03e-08;36!UBERON:0001004;7.40e-08;65!UBERON:0003929;1.16e-07;7!UBERON:0003350;9.35e-07;8!UBERON:0001828;9.35e-07;8
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.61e-17,3;UBERON:0001004,6.14e-16,74;UBERON:0000166,5.63e-15,22;UBERON:0003729,7.19e-15,13;UBERON:0003343,6.22e-13,4;UBERON:0004785,6.22e-13,4;UBERON:0002419,2.79e-12,2;UBERON:0007771,2.79e-12,2;UBERON:0003297,2.79e-12,2;UBERON:0001821,2.79e-12,2;UBERON:0003487,2.79e-12,2;UBERON:0001820,2.79e-12,2;UBERON:0005089,2.79e-12,2;UBERON:0005088,2.79e-12,2;UBERON:0004119,3.79e-12,160;UBERON:0000925,3.79e-12,160;UBERON:0006595,3.79e-12,160;UBERON:0000365,3.95e-11,5;UBERON:0000165,4.48e-11,29;UBERON:0000930,4.48e-11,29;UBERON:0000161,6.34e-11,36;UBERON:0003102,7.32e-11,99;UBERON:0000033,8.27e-10,56;UBERON:0001444,1.73e-09,49;UBERON:0000344,1.79e-09,20;UBERON:0005910,2.38e-09,6;UBERON:0004815,7.21e-09,3;UBERON:0002031,7.21e-09,3;UBERON:0000153,1.15e-08,62;UBERON:0007811,1.15e-08,62;UBERON:0000065,6.00e-07,54;UBERON:0003350,7.27e-07,8;UBERON:0001828,7.27e-07,8
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|short_description=p@chr20:60953877..60953897,-
}}

Latest revision as of 16:08, 28 July 2015

Short description:p@chr20:60953877..60953897, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr20:60953877..60953897, -
Coexpression cluster:C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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