FFCP PHASE1:Hg19::chr21:36208749..36208768,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:36208749..36208768,+
|short_description=p@chr21:36208749..36208768,+
|description=CAGE_peak_at_chr21:36208749..36208768,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:36208749..36208768,+ | |||
|description=CAGE_peak_at_chr21:36208749..36208768,+ | |||
|id=chr21:36208749..36208768,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.19e-19!45;CL:0002194!1.10e-17!63;CL:0000576!1.10e-17!63;CL:0000040!1.10e-17!63;CL:0000559!1.10e-17!63;CL:0002057!1.50e-17!42;CL:0002009!9.10e-17!65;CL:0000839!1.03e-14!70;CL:0000557!2.42e-14!71;CL:0000766!1.50e-13!76;CL:0000136!4.20e-09!15;CL:0002551!9.58e-09!6;CL:0000048!9.48e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002551;4.18e-23;6!CL:0000860;8.25e-19;33!CL:0002057;8.25e-19;33!CL:0000136;4.06e-18;13!CL:0000473;2.92e-16;39!CL:0000234;2.92e-16;39!CL:0002521;1.62e-12;3!CL:0000576;9.17e-10;48!CL:0002561;5.03e-09;2!CL:0002559;1.10e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,1.81e-23,6;CL:0000473,1.84e-18,48;CL:0000234,1.84e-18,48;CL:0002194,5.61e-18,59;CL:0000576,5.61e-18,59;CL:0000040,5.61e-18,59;CL:0000559,5.61e-18,59;CL:0002009,2.96e-17,61;CL:0000860,3.66e-16,42;CL:0002057,3.66e-16,42;CL:0000839,1.22e-15,66;CL:0000136,1.87e-15,15;CL:0000557,2.41e-15,67;CL:0000766,5.38e-14,72;CL:0002521,1.18e-12,3;CL:0002561,6.43e-09,2;CL:0000763,5.39e-08,108;CL:0000049,5.39e-08,108;CL:0000134,7.35e-08,354;CL:0002559,1.08e-07,5;CL:0002320,1.51e-07,361;CL:0002087,2.84e-07,115;CL:0000219,4.80e-07,386;CL:0000048,7.44e-07,427;CL:0002031,8.22e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.22e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.57e-13!101;UBERON:0001434!1.57e-13!101;UBERON:0002371!3.14e-13!80;UBERON:0001474!3.75e-12!86;UBERON:0002204!4.24e-12!167;UBERON:0002405!7.04e-09!115;UBERON:0002390!1.93e-08!102;UBERON:0003061!1.93e-08!102;UBERON:0002067!2.61e-07!9;UBERON:0004016!2.61e-07!9;UBERON:0010083!2.61e-07!9;UBERON:0000062!4.50e-07!511;UBERON:0002193!9.27e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.81e-20;9!UBERON:0002190;1.62e-12;3!UBERON:0005933;5.03e-09;2!UBERON:0005942;5.03e-09;2!UBERON:0005932;5.03e-09;2!UBERON:0002199;4.84e-08;46!UBERON:0002416;4.84e-08;46!UBERON:0003102;1.03e-07;50!UBERON:0002073;1.10e-07;5!UBERON:0002072;1.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,7.71e-21,9;UBERON:0004016,7.71e-21,9;UBERON:0010083,7.71e-21,9;UBERON:0002371,4.80e-13,76;UBERON:0002190,1.18e-12,3;UBERON:0001474,8.58e-12,82;UBERON:0002199,1.07e-11,46;UBERON:0002416,1.07e-11,46;UBERON:0004765,2.19e-10,90;UBERON:0001434,4.41e-10,100;UBERON:0002405,6.38e-10,93;UBERON:0002390,3.27e-09,98;UBERON:0003061,3.27e-09,98;UBERON:0005933,6.43e-09,2;UBERON:0005942,6.43e-09,2;UBERON:0005932,6.43e-09,2;UBERON:0002193,5.39e-08,108;UBERON:0002384,8.89e-08,371;UBERON:0002072,9.16e-08,5;UBERON:0002097,9.34e-08,41;UBERON:0002073,1.08e-07,5;UBERON:0005086,1.08e-07,5 | |||
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| ||
|short_description=p@chr21:36208749..36208768,+ | |||
}} | }} |
Latest revision as of 17:34, 28 July 2015
Short description: | p@chr21:36208749..36208768, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:36208749..36208768, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 1.81e-23 | 6 |
defensive cell | 1.84e-18 | 48 |
phagocyte | 1.84e-18 | 48 |
monopoietic cell | 5.61e-18 | 59 |
monocyte | 5.61e-18 | 59 |
monoblast | 5.61e-18 | 59 |
promonocyte | 5.61e-18 | 59 |
macrophage dendritic cell progenitor | 2.96e-17 | 61 |
classical monocyte | 3.66e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.66e-16 | 42 |
myeloid lineage restricted progenitor cell | 1.22e-15 | 66 |
fat cell | 1.87e-15 | 15 |
granulocyte monocyte progenitor cell | 2.41e-15 | 67 |
myeloid leukocyte | 5.38e-14 | 72 |
subcutaneous fat cell | 1.18e-12 | 3 |
outer root sheath cell | 6.43e-09 | 2 |
myeloid cell | 5.39e-08 | 108 |
common myeloid progenitor | 5.39e-08 | 108 |
mesenchymal cell | 7.35e-08 | 354 |
hair follicle cell | 1.08e-07 | 5 |
connective tissue cell | 1.51e-07 | 361 |
nongranular leukocyte | 2.84e-07 | 115 |
motile cell | 4.80e-07 | 386 |
multi fate stem cell | 7.44e-07 | 427 |
hematopoietic lineage restricted progenitor cell | 8.22e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
dermis | 7.71e-21 | 9 |
dermatome | 7.71e-21 | 9 |
future dermis | 7.71e-21 | 9 |
bone marrow | 4.80e-13 | 76 |
subcutaneous adipose tissue | 1.18e-12 | 3 |
bone element | 8.58e-12 | 82 |
integument | 1.07e-11 | 46 |
integumental system | 1.07e-11 | 46 |
skeletal element | 2.19e-10 | 90 |
skeletal system | 4.41e-10 | 100 |
immune system | 6.38e-10 | 93 |
hematopoietic system | 3.27e-09 | 98 |
blood island | 3.27e-09 | 98 |
hair root sheath | 6.43e-09 | 2 |
hair outer root sheath | 6.43e-09 | 2 |
bulb of hair follicle | 6.43e-09 | 2 |
hemolymphoid system | 5.39e-08 | 108 |
connective tissue | 8.89e-08 | 371 |
hypodermis | 9.16e-08 | 5 |
skin of body | 9.34e-08 | 41 |
hair follicle | 1.08e-07 | 5 |
hair follicle placode | 1.08e-07 | 5 |