FFCP PHASE1:Hg19::chr21:47403828..47403848,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47403828..47403848,+ | |||
|description=CAGE_peak_at_chr21:47403828..47403848,+ | |description=CAGE_peak_at_chr21:47403828..47403848,+ | ||
|id=chr21:47403828..47403848,+ | |id=chr21:47403828..47403848,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.96e-31!180;CL:0000057!6.82e-31!75;CL:0002620!9.30e-22!23;CL:0000048!1.45e-20!430;CL:0000723!7.21e-20!436;CL:0000034!5.73e-19!444;CL:0002570!1.40e-14!8;CL:0002371!3.45e-14!591;CL:0000183!3.78e-13!59;CL:0000680!6.79e-13!57;CL:0000056!6.79e-13!57;CL:0000355!6.79e-13!57;CL:0000187!8.72e-13!54;CL:0002320!2.07e-12!365;CL:0000144!2.65e-12!625;CL:0000393!9.14e-11!60;CL:0000211!9.14e-11!60;CL:0000134!1.58e-10!358;CL:0000188!5.68e-10!9;CL:0000548!8.23e-10!679;CL:0000004!8.23e-10!679;CL:0000255!8.23e-10!679;CL:0000012!1.27e-09!682;CL:0002551!9.11e-09!6;CL:0000219!1.21e-08!390;CL:0000192!6.86e-08!42;CL:0000514!6.86e-08!42;CL:0000003!3.00e-07!722 | |ontology_enrichment_celltype=CL:0000055!3.96e-31!180;CL:0000057!6.82e-31!75;CL:0002620!9.30e-22!23;CL:0000048!1.45e-20!430;CL:0000723!7.21e-20!436;CL:0000034!5.73e-19!444;CL:0002570!1.40e-14!8;CL:0002371!3.45e-14!591;CL:0000183!3.78e-13!59;CL:0000680!6.79e-13!57;CL:0000056!6.79e-13!57;CL:0000355!6.79e-13!57;CL:0000187!8.72e-13!54;CL:0002320!2.07e-12!365;CL:0000144!2.65e-12!625;CL:0000393!9.14e-11!60;CL:0000211!9.14e-11!60;CL:0000134!1.58e-10!358;CL:0000188!5.68e-10!9;CL:0000548!8.23e-10!679;CL:0000004!8.23e-10!679;CL:0000255!8.23e-10!679;CL:0000012!1.27e-09!682;CL:0002551!9.11e-09!6;CL:0000219!1.21e-08!390;CL:0000192!6.86e-08!42;CL:0000514!6.86e-08!42;CL:0000003!3.00e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002570;3.68e-31;8!CL:0000346;7.16e-13;3!CL:1000428;7.16e-13;3!CL:0002582;1.75e-12;3!CL:0002583;2.40e-09;2!CL:0002620;5.23e-09;23!CL:0000048;5.81e-09;58!CL:0000057;1.39e-08;73!CL:0000723;1.50e-08;61!CL:0002554;1.72e-08;2!CL:0000134;3.02e-08;55!CL:0002334;3.65e-08;12!CL:0002559;7.08e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,3.92e-31,8;CL:0000057,6.18e-23,76;CL:0000346,6.89e-13,3;CL:1000428,6.89e-13,3;CL:0002582,1.62e-12,3;CL:0000048,3.95e-11,427;CL:0000723,7.90e-11,433;CL:0000034,1.93e-10,441;CL:0000134,1.32e-09,354;CL:0002583,2.36e-09,2;CL:0002320,3.07e-09,361;CL:0002620,5.43e-09,23;CL:0002554,1.37e-08,2;CL:0002334,3.52e-08,12;CL:0000219,6.01e-08,386;CL:0002559,6.92e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.50e-08!5;DOID:450!1.50e-08!5;DOID:66!1.50e-08!5;DOID:423!1.50e-08!5;DOID:0080000!1.50e-08!5;DOID:11722!1.50e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.42e-12;5!DOID:450;5.42e-12;5!DOID:66;5.42e-12;5!DOID:423;5.42e-12;5!DOID:0080000;5.42e-12;5!DOID:11722;5.42e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.47e-12,5;DOID:450,6.47e-12,5;DOID:66,6.47e-12,5;DOID:423,6.47e-12,5;DOID:0080000,6.47e-12,5;DOID:11722,6.47e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.99e-24!45;UBERON:0002416!3.99e-24!45;UBERON:0003102!3.57e-21!95;UBERON:0000914!2.26e-20!83;UBERON:0002329!2.26e-20!83;UBERON:0003077!2.26e-20!83;UBERON:0003059!2.26e-20!83;UBERON:0007282!2.26e-20!83;UBERON:0009618!2.26e-20!83;UBERON:0007285!2.26e-20!83;UBERON:0002097!8.85e-20!40;UBERON:0004290!1.74e-19!70;UBERON:0000486!4.89e-15!82;UBERON:0005256!4.53e-14!143;UBERON:0002067!1.34e-13!9;UBERON:0004016!1.34e-13!9;UBERON:0010083!1.34e-13!9;UBERON:0002384!1.85e-12!375;UBERON:0001013!1.48e-11!14;UBERON:0001134!1.54e-11!61;UBERON:0002036!1.54e-11!61;UBERON:0003082!1.54e-11!61;UBERON:0002385!6.23e-11!63;UBERON:0001015!6.23e-11!63;UBERON:0000383!6.23e-11!63;UBERON:0000475!5.30e-09!365;UBERON:0002100!9.80e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;7.65e-22;14!UBERON:0000412;7.16e-13;3!UBERON:0001992;7.16e-13;3!UBERON:0002097;1.39e-11;41!UBERON:0002199;4.12e-11;46!UBERON:0002416;4.12e-11;46!UBERON:0002067;6.32e-11;9!UBERON:0003102;1.19e-10;50!UBERON:0002072;4.78e-08;5!UBERON:0002073;7.08e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,8.06e-22,14;UBERON:0002199,2.05e-17,46;UBERON:0002416,2.05e-17,46;UBERON:0000412,6.89e-13,3;UBERON:0001992,6.89e-13,3;UBERON:0002097,1.49e-12,41;UBERON:0003102,6.79e-12,99;UBERON:0002067,6.08e-11,9;UBERON:0004016,6.08e-11,9;UBERON:0010083,6.08e-11,9;UBERON:0002384,9.74e-09,371;UBERON:0002072,4.78e-08,5;UBERON:0002073,6.92e-08,5;UBERON:0005086,6.92e-08,5 | |||
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|short_description=p@chr21:47403828..47403848,+ | |short_description=p@chr21:47403828..47403848,+ | ||
}} | }} |
Latest revision as of 18:41, 28 July 2015
Short description: | p@chr21:47403828..47403848, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47403828..47403848, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 3.92e-31 | 8 |
fibroblast | 6.18e-23 | 76 |
hair follicle dermal papilla cell | 6.89e-13 | 3 |
stem cell of epidermis | 6.89e-13 | 3 |
visceral preadipocyte | 1.62e-12 | 3 |
multi fate stem cell | 3.95e-11 | 427 |
somatic stem cell | 7.90e-11 | 433 |
stem cell | 1.93e-10 | 441 |
mesenchymal cell | 1.32e-09 | 354 |
subcutaneous preadipocyte | 2.36e-09 | 2 |
connective tissue cell | 3.07e-09 | 361 |
skin fibroblast | 5.43e-09 | 23 |
fibroblast of lymphatic vessel | 1.37e-08 | 2 |
preadipocyte | 3.52e-08 | 12 |
motile cell | 6.01e-08 | 386 |
hair follicle cell | 6.92e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 8.06e-22 | 14 |
integument | 2.05e-17 | 46 |
integumental system | 2.05e-17 | 46 |
dermal papilla | 6.89e-13 | 3 |
papillary layer of dermis | 6.89e-13 | 3 |
skin of body | 1.49e-12 | 41 |
surface structure | 6.79e-12 | 99 |
dermis | 6.08e-11 | 9 |
dermatome | 6.08e-11 | 9 |
future dermis | 6.08e-11 | 9 |
connective tissue | 9.74e-09 | 371 |
hypodermis | 4.78e-08 | 5 |
hair follicle | 6.92e-08 | 5 |
hair follicle placode | 6.92e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.47e-12 | 5 |
myotonic disease | 6.47e-12 | 5 |
muscle tissue disease | 6.47e-12 | 5 |
myopathy | 6.47e-12 | 5 |
muscular disease | 6.47e-12 | 5 |
myotonic dystrophy | 6.47e-12 | 5 |