FFCP PHASE1:Hg19::chr21:47423769..47423786,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:47423769..47423786,+
|short_description=p@chr21:47423769..47423786,+
|description=CAGE_peak_at_chr21:47423769..47423786,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:47423769..47423786,+ | |||
|coexpression_cluster_id=C198 | |||
|description=CAGE_peak_at_chr21:47423769..47423786,+ | |||
|id=chr21:47423769..47423786,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.80e-35!180;CL:0000057!3.07e-28!75;CL:0002620!9.02e-11!23;CL:0000680!4.41e-10!57;CL:0000056!4.41e-10!57;CL:0000355!4.41e-10!57;CL:0000187!4.17e-09!54;CL:0000499!5.00e-09!27;CL:0000183!5.89e-09!59;CL:0000048!2.64e-08!430;CL:0000393!6.54e-08!60;CL:0000211!6.54e-08!60;CL:0000723!1.48e-07!436;CL:0000034!1.56e-07!444;CL:0002570!1.62e-07!8;CL:0002334!1.98e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.15e-09;73!CL:0002570;1.29e-09;8!CL:0002620;1.71e-09;23!CL:0000499;3.26e-08;28!CL:0002334;2.03e-07;12!CL:0000136;6.38e-07;13!CL:0002320;6.60e-07;188!CL:0000134;7.68e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.49e-23,76;CL:0000048,6.39e-13,427;CL:0000723,2.47e-12,433;CL:0000034,1.40e-11,441;CL:0002570,8.92e-10,8;CL:0002320,1.13e-09,361;CL:0002620,2.62e-09,23;CL:0000136,3.45e-09,15;CL:0000499,3.01e-08,28;CL:0000134,1.08e-07,354;CL:0002334,2.20e-07,12;CL:0000680,2.60e-07,58;CL:0000056,2.60e-07,58;CL:0000355,2.60e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.09e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.75e-07,5;DOID:450,5.75e-07,5;DOID:66,5.75e-07,5;DOID:423,5.75e-07,5;DOID:0080000,5.75e-07,5;DOID:11722,5.75e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.80e-12!83;UBERON:0002329!9.80e-12!83;UBERON:0003077!9.80e-12!83;UBERON:0003059!9.80e-12!83;UBERON:0007282!9.80e-12!83;UBERON:0009618!9.80e-12!83;UBERON:0007285!9.80e-12!83;UBERON:0004290!3.23e-11!70;UBERON:0001013!3.76e-11!14;UBERON:0002385!1.15e-10!63;UBERON:0001015!1.15e-10!63;UBERON:0000383!1.15e-10!63;UBERON:0001134!3.42e-10!61;UBERON:0002036!3.42e-10!61;UBERON:0003082!3.42e-10!61;UBERON:0003102!1.62e-09!95;UBERON:0005256!7.91e-09!143;UBERON:0000486!8.06e-09!82;UBERON:0002199!2.16e-08!45;UBERON:0002416!2.16e-08!45;UBERON:0000475!4.01e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.18e-15;14!UBERON:0002384;3.23e-09;198!UBERON:0002199;1.72e-08;46!UBERON:0002416;1.72e-08;46!UBERON:0002385;4.59e-08;31!UBERON:0001015;4.59e-08;31!UBERON:0000383;4.59e-08;31!UBERON:0002072;7.95e-08;5!UBERON:0001134;1.43e-07;16!UBERON:0002036;1.43e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,4.09e-16,14;UBERON:0002199,9.51e-12,46;UBERON:0002416,9.51e-12,46;UBERON:0002384,1.52e-10,371;UBERON:0002329,1.88e-08,71;UBERON:0003059,1.88e-08,71;UBERON:0007282,1.88e-08,71;UBERON:0004290,1.88e-08,71;UBERON:0009618,1.88e-08,71;UBERON:0003102,2.04e-08,99;UBERON:0003077,3.16e-08,72;UBERON:0007285,3.16e-08,72;UBERON:0007524,5.22e-08,73;UBERON:0001134,5.23e-08,62;UBERON:0002036,5.23e-08,62;UBERON:0003082,5.23e-08,62;UBERON:0002072,8.48e-08,5;UBERON:0002097,8.72e-08,41;UBERON:0002385,1.52e-07,64;UBERON:0001015,1.52e-07,64;UBERON:0000383,1.52e-07,64;UBERON:0007503,5.12e-07,78;UBERON:0005256,5.15e-07,122;UBERON:0000486,9.23e-07,83 | |||
|phase1_expression=1.09007027562334,2.35510576280081,1.69145284915165,1.0007329835313,4.02264984984559,1.74467704820074,2.53299878168311,8.84407822797563,2.87304191019822,0,0.697801167972428,0,0,1.23766352960047,1.32558950291166,2.6893005858071,2.41077811209591,3.65155045193687,0.487932798790507,0.246242116153576,0.816002764977012,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,3.2529523714611,1.50401373190767,4.34539556882471,2.3858578411533,0.486634870302636,0.189069634328136,0.665188192387692,0.263504357079378,0.130979075497713,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,2.98183171017191,1.01304409331664,0.662045904066094,6.02356903572509,2.4826786753885,2.80338800071154,1.06748995729705,0.98667019366864,0.622422070799533,0.134710672069688,0.326923806226917,1.66493170409425,4.60940739583999,0.234321431833797,1.24864030732128,0,4.33401173600223,0.587172493218824,0.809364721840658,0.561803226808994,1.22492502752936,0.982674538494144,1.54988671763648,3.56400857184616,4.20353779773547,0.910161361938026,5.03032699271367,0.168336113954066,0.875829639103749,0,0.877955241761676,1.5324389789951,1.50238058906597,0.226864366320042,1.79389635688862,3.63047560991565,2.11931901159562,2.70081986475962,1.75189299705346,0.515281080091258,1.30281799432113,2.02531598689519,0.779496041289589,2.27190396819703,1.47279837827679,4.36444353410792,3.55009592516614,1.10827308050404,1.01736355386293,0,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0.504641701751257,0,0,10.2918550110862,0,2.78620756819187,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0.977424915930974,2.07986957055916,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0.897048674762886,0.43596006883328,0.5867062865676,0.775630294546667,7.15312891703765,4.22651376278,0.531876233169741,0,0.257207374262142,0,1.5985330740966,2.28764789853036,3.25572963234866,0,0.977208552881205,0.710783897485092,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,1.42636905040718,1.44781306667579,1.2328579353023,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.59498939234882,1.50051156317903,0.813795071099207,1.45579603071565,0.713715955188647,0.630809660135739,0.468565659970853,0.300946099727719,0,4.1389228517002,0.664225598535437,0.737476674166813,3.47534457872331,2.93701736194111,4.46086450954113,0,0,0,0,0,0,0.744323423456331,0.61384789315225,1.12264037773229,1.40953064181271,1.53512174720011,0.804269605718038,1.48418066444991,2.15893571323718,4.08391968220192,1.97105174433142,3.11552657510173,3.1376802184189,0,0,0,2.18147451512753,4.37018803216121,6.29397191805236,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,0.618246069886334,0.366277859273374,0.082509499920588,0,0,3.21367859688319,7.0569624353249,1.07834031980251,1.38153307253517,0.689182862422653,0.859361958946189,2.32026710262766,1.19317278382541,2.49289699810865,0.165284915360978,0,0,0,0,6.2962469366128,0,0.616067160352178,0,0,0.9266210955196,0.143124886741991,1.86079184679834,1.58189712359363,1.71567174531442,0.255897791311334,3.85145089230528,0.95460974377781,2.35484592059769,1.07923474549989,1.37268514868027,0.942499218765491,0.202182481573316,0,0,0.48763373908959,0.974853958525138,0,1.9109987597118,3.25232493493539,0,0.551365343546124,0,0.876901770507525,0,1.9676842561399,0.202910376962704,0.30982349809975,1.40847801266121,0,0.589494246078727,0,0,1.68886108238131,0.987884678879706,1.13841952129715,2.79947776195986,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0.95497793895076,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0,0,4.0435146396035,0,0,0,0.690503839458535,0,1.11136990144637,0,0.0927680981618513,0,0,0,2.89999830173917,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,1.38510465306835,0,0,0,0,0.638002319463839,0.824378340616761,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.353830258013357,0,0,0.123563938946503,0,0,2.40773294189637,0.234264445725339,0,0,0.485560759068186,1.97292201424695,0,0,0.189559738885464,0,0.207376382794494,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0,0,1.57254001417827,1.0319161948297,0,0,0,1.06687918137261,0,0.451961481561065,0,0,0,0,0,0.640358984218058,0.599428828746391,0,0,0,0,0,0,0.271808412147228,0.313808538937,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,2.79282401272254,0,0.717873024576814,0,0,0,0.268733889946905,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0,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| ||
|short_description=p@chr21:47423769..47423786,+ | |||
}} | }} |
Latest revision as of 18:44, 28 July 2015
Short description: | p@chr21:47423769..47423786, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47423769..47423786, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.49e-23 | 76 |
multi fate stem cell | 6.39e-13 | 427 |
somatic stem cell | 2.47e-12 | 433 |
stem cell | 1.40e-11 | 441 |
mesenchymal stem cell of adipose | 8.92e-10 | 8 |
connective tissue cell | 1.13e-09 | 361 |
skin fibroblast | 2.62e-09 | 23 |
fat cell | 3.45e-09 | 15 |
stromal cell | 3.01e-08 | 28 |
mesenchymal cell | 1.08e-07 | 354 |
preadipocyte | 2.20e-07 | 12 |
muscle precursor cell | 2.60e-07 | 58 |
myoblast | 2.60e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.60e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 4.09e-16 | 14 |
integument | 9.51e-12 | 46 |
integumental system | 9.51e-12 | 46 |
connective tissue | 1.52e-10 | 371 |
somite | 1.88e-08 | 71 |
presomitic mesoderm | 1.88e-08 | 71 |
presumptive segmental plate | 1.88e-08 | 71 |
dermomyotome | 1.88e-08 | 71 |
trunk paraxial mesoderm | 1.88e-08 | 71 |
surface structure | 2.04e-08 | 99 |
paraxial mesoderm | 3.16e-08 | 72 |
presumptive paraxial mesoderm | 3.16e-08 | 72 |
dense mesenchyme tissue | 5.22e-08 | 73 |
skeletal muscle tissue | 5.23e-08 | 62 |
striated muscle tissue | 5.23e-08 | 62 |
myotome | 5.23e-08 | 62 |
hypodermis | 8.48e-08 | 5 |
skin of body | 8.72e-08 | 41 |
muscle tissue | 1.52e-07 | 64 |
musculature | 1.52e-07 | 64 |
musculature of body | 1.52e-07 | 64 |
epithelial vesicle | 5.12e-07 | 78 |
trunk mesenchyme | 5.15e-07 | 122 |
multilaminar epithelium | 9.23e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.75e-07 | 5 |
myotonic disease | 5.75e-07 | 5 |
muscle tissue disease | 5.75e-07 | 5 |
myopathy | 5.75e-07 | 5 |
muscular disease | 5.75e-07 | 5 |
myotonic dystrophy | 5.75e-07 | 5 |