FFCP PHASE1:Hg19::chr22:44713111..44713116,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:44713111..44713116,+
|short_description=p@chr22:44713111..44713116,+
|description=CAGE_peak_at_chr22:44713111..44713116,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:44713111..44713116,+ | |||
|description=CAGE_peak_at_chr22:44713111..44713116,+ | |||
|id=chr22:44713111..44713116,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.57e-12!71;CL:0002159!6.75e-11!13;CL:0002319!8.34e-09!25;CL:0000362!6.13e-08!8;CL:0002620!1.54e-07!23;CL:0000133!2.46e-07!59;CL:0002551!2.82e-07!6;CL:0000312!5.36e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.91e-14;5!CL:0000307;2.64e-11;3!CL:0002159;3.86e-09;14!CL:0000362;2.69e-08;9!CL:0002620;3.61e-08;23!CL:0000312;3.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.38e-11,3;CL:0000069,2.38e-11,3;CL:0000307,2.38e-11,3;CL:0000377,2.38e-11,3;CL:0002159,3.26e-09,14;CL:0000362,2.20e-08,9;CL:0002620,4.23e-08,23;CL:0000312,2.88e-07,5;CL:0000221,3.54e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000377;2.64e-11;3 | |||
|ontology_enrichment_disease=DOID:162!6.89e-11!235;DOID:14566!1.12e-10!239;DOID:0050687!8.29e-09!143;DOID:171!3.64e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.43e-19;10!DOID:169;3.95e-12;6!DOID:1036;2.60e-09;8!DOID:3095;1.23e-08;22!DOID:2994;1.23e-08;22!DOID:17;5.47e-07;5!DOID:450;5.47e-07;5!DOID:66;5.47e-07;5!DOID:423;5.47e-07;5!DOID:0080000;5.47e-07;5!DOID:11722;5.47e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.63e-19,10;DOID:169,2.23e-12,6;DOID:1036,3.36e-09,8;DOID:3095,8.87e-09,22;DOID:2994,8.87e-09,22;DOID:17,7.18e-07,5;DOID:450,7.18e-07,5;DOID:66,7.18e-07,5;DOID:423,7.18e-07,5;DOID:0080000,7.18e-07,5;DOID:11722,7.18e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!9.23e-15!40;UBERON:0002199!1.98e-14!45;UBERON:0002416!1.98e-14!45;UBERON:0003102!6.31e-11!95;UBERON:0001003!5.02e-08!14;UBERON:0007376!5.02e-08!14;UBERON:0007383!5.02e-08!14;UBERON:0000013!2.90e-07!5;UBERON:0002410!2.90e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.91e-14;5!UBERON:0002410;1.91e-14;5!UBERON:0002097;7.31e-09;41!UBERON:0002346;9.74e-09;4!UBERON:0000923;9.74e-09;4!UBERON:0010316;9.74e-09;4!UBERON:0005291;9.74e-09;4!UBERON:0000010;2.98e-08;8!UBERON:0002199;7.40e-08;46!UBERON:0002416;7.40e-08;46!UBERON:0003102;8.64e-08;50!UBERON:0002050;3.74e-07;5!UBERON:0005423;3.74e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.58e-15,5;UBERON:0002410,9.58e-15,5;UBERON:0002097,6.88e-11,41;UBERON:0002199,1.37e-09,46;UBERON:0002416,1.37e-09,46;UBERON:0000010,2.04e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984968464614303,0.612002073732759,0.313454721478088,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,0.614843499851882,0.0654895377488563,0.728590576585084,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,1.1409436430889,0.149448680551801,0.23486899728753,0.647491777472526,1.40450806702248,0,0,0,0,0,0,0,0.673344455816265,0.500474079487857,0.277064115484183,0,0,0,0,1.07633781413317,0.213557388818567,0,1.20036438433761,0.103052529238439,0.772921620136887,0,0,0,2.27190396819703,0,0.161646056818812,0.710019185033229,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.548751427043128,4.49607013030478,1.70899253099772,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0,0.508189248444927,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0.290012154876366,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0.577076851905779,0.355709216742071,0.637705090915289,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,1.05562704063997,0,0,0.251932747854276,0,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.455173793141999,0,0,6.89486746482929,0,1.21537496453305,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0.498635045700469,0,0,0.167821586975843,7.5901493089674,1.27149263184303,0.843992258112108,0.163232808159148,0.848118428603645,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0.284609546029793,0,0.694238953340524,0.195984794828755,0.522355239482415,0,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0.397429223405979,0,0,0.160317640503067,0,0,0.432271251462318,0.114536596165916,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0.496166021811951,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0.499921631848426,0.606596470166591,0,0,0.468334905806882,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0.50313580350515,3.55924488638614,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,1.66262682694747,1.72519698234691,2.51625506969434,0.218419276384028,3.22491806912648,0,0.371807292777007,0.558644917973244,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.471878893390961,0.550285795565037,0.924205329202706,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0.818859587550484,0.295712172434091,0.0675375846183947,0,0,0,0.546974809018219,0,0,1.40696995487696,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0.280272163313789,0.913158720509496,0.215927591218621,0,0.357382720883282,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0.485710993059139,0,0.994753875806841,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0.946629373159108,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.327796715891087,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0.435433495793923,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984968464614303,0.612002073732759,0.313454721478088,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,0.614843499851882,0.0654895377488563,0.728590576585084,5.19098219898201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,1.1409436430889,0.149448680551801,0.23486899728753,0.647491777472526,1.40450806702248,0,0,0,0,0,0,0,0.673344455816265,0.500474079487857,0.277064115484183,0,0,0,0,1.07633781413317,0.213557388818567,0,1.20036438433761,0.103052529238439,0.772921620136887,0,0,0,2.27190396819703,0,0.161646056818812,0.710019185033229,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.548751427043128,4.49607013030478,1.70899253099772,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0,0.508189248444927,1.30139853857622,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0.290012154876366,0,0,0,0,0,0.0852266274161009,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,1.34060455107157,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.245040215981032,0,0.577076851905779,0.355709216742071,0.637705090915289,0,0.383010740264733,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0.852408440419239,0,0,0,0,0,0,0,1.05562704063997,0,0,0.251932747854276,0,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.455173793141999,0,0,6.89486746482929,0,1.21537496453305,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0.498635045700469,0,0,0.167821586975843,7.5901493089674,1.27149263184303,0.843992258112108,0.163232808159148,0.848118428603645,0.216388639742091,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0,0,0,0,0,0.284609546029793,0,0.694238953340524,0.195984794828755,0.522355239482415,0,0.343972064943233,0,0,0,0,0,0.225980740780532,0,0.397429223405979,0,0,0.160317640503067,0,0,0.432271251462318,0.114536596165916,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.931406652723629,0,0,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0.496166021811951,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0.499921631848426,0.606596470166591,0,0,0.468334905806882,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0.50313580350515,3.55924488638614,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,1.66262682694747,1.72519698234691,2.51625506969434,0.218419276384028,3.22491806912648,0,0.371807292777007,0.558644917973244,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0.471878893390961,0.550285795565037,0.924205329202706,0,0,0.198916222116275,0.0752103283492573,0,0,0.261906694481422,0.818859587550484,0.295712172434091,0.0675375846183947,0,0,0,0.546974809018219,0,0,1.40696995487696,0.127762427639595,0.535701835878287,0,0,0,0,0,0,0,0,0.118193840883968,0.444925607568277,0,0,0.280272163313789,0.913158720509496,0.215927591218621,0,0.357382720883282,0,0.116241425368125,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0.485710993059139,0,0.994753875806841,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0.946629373159108,0.0679914901909147,0,0,0,0,0,0.252332849670158,0.327796715891087,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0.435433495793923,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr22:44713111..44713116,+ | |||
}} | }} |
Latest revision as of 21:59, 28 July 2015
Short description: | p@chr22:44713111..44713116, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:44713111..44713116, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.38e-11 | 3 |
branched duct epithelial cell | 2.38e-11 | 3 |
tracheal epithelial cell | 2.38e-11 | 3 |
tracheoblast | 2.38e-11 | 3 |
general ecto-epithelial cell | 3.26e-09 | 14 |
epidermal cell | 2.20e-08 | 9 |
skin fibroblast | 4.23e-08 | 23 |
keratinocyte | 2.88e-07 | 5 |
ectodermal cell | 3.54e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.58e-15 | 5 |
autonomic nervous system | 9.58e-15 | 5 |
skin of body | 6.88e-11 | 41 |
integument | 1.37e-09 | 46 |
integumental system | 1.37e-09 | 46 |
peripheral nervous system | 2.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.63e-19 | 10 |
neuroendocrine tumor | 2.23e-12 | 6 |
chronic leukemia | 3.36e-09 | 8 |
germ cell and embryonal cancer | 8.87e-09 | 22 |
germ cell cancer | 8.87e-09 | 22 |
musculoskeletal system disease | 7.18e-07 | 5 |
myotonic disease | 7.18e-07 | 5 |
muscle tissue disease | 7.18e-07 | 5 |
myopathy | 7.18e-07 | 5 |
muscular disease | 7.18e-07 | 5 |
myotonic dystrophy | 7.18e-07 | 5 |