FFCP PHASE1:Hg19::chr22:45931093..45931118,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:45931093..45931118,+
|short_description=p@chr22:45931093..45931118,+
|description=CAGE_peak_at_chr22:45931093..45931118,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:45931093..45931118,+ | |||
|coexpression_cluster_id=C2649 | |||
|description=CAGE_peak_at_chr22:45931093..45931118,+ | |||
|id=chr22:45931093..45931118,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.25e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0000499;4.31e-09;28!CL:0000135;4.59e-09;3!CL:0000388;4.59e-09;3!CL:0002622;6.15e-09;3!CL:0002552;7.01e-09;5!CL:0002541;4.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,2.78e-09,28;CL:0000135,4.34e-09,3;CL:0002622,4.34e-09,3;CL:0000388,4.34e-09,3;CL:0002552,6.79e-09,5;CL:0002541,5.96e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.29e-11!95;UBERON:0000161!9.56e-08!35;UBERON:0000162!1.27e-07!14;UBERON:0001353!1.27e-07!14;UBERON:0000163!1.27e-07!14;UBERON:0006866!1.27e-07!14;UBERON:0000164!1.27e-07!14;UBERON:0000931!1.27e-07!14;UBERON:0003101!1.34e-07!22;UBERON:0000079!1.34e-07!22;UBERON:0000475!2.45e-07!365;UBERON:0000481!2.87e-07!347;UBERON:0001007!4.64e-07!155;UBERON:0001555!4.64e-07!155;UBERON:0007026!4.64e-07!155;UBERON:0004122!7.68e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.59e-09;3!UBERON:0000043;4.59e-09;3!UBERON:0007845;4.59e-09;3!UBERON:0002367;3.22e-08;11!UBERON:0010147;3.22e-08;11!UBERON:0003124;4.02e-08;3!UBERON:0000920;4.02e-08;3!UBERON:0003937;1.82e-07;12!UBERON:0005399;1.82e-07;12!UBERON:0005406;5.67e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000162,6.47e-11,14;UBERON:0001353,6.47e-11,14;UBERON:0000163,6.47e-11,14;UBERON:0006866,6.47e-11,14;UBERON:0000164,6.47e-11,14;UBERON:0000931,6.47e-11,14;UBERON:0004122,4.36e-10,15;UBERON:0000161,1.67e-09,36;UBERON:0007846,4.34e-09,3;UBERON:0000043,4.34e-09,3;UBERON:0007845,4.34e-09,3;UBERON:0002367,2.90e-08,11;UBERON:0010147,2.90e-08,11;UBERON:0009846,2.90e-08,11;UBERON:0003353,2.90e-08,11;UBERON:0004902,2.90e-08,11;UBERON:0003820,2.90e-08,11;UBERON:0009847,2.90e-08,11;UBERON:0000920,5.96e-08,3;UBERON:0001046,1.19e-07,19;UBERON:0003937,1.65e-07,12;UBERON:0005399,1.65e-07,12;UBERON:0003064,1.95e-07,28;UBERON:0003102,2.83e-07,99;UBERON:0004923,2.86e-07,66;UBERON:0005406,5.63e-07,2 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.422863212287913,2.00146596706261,0.893922188854576,6.10636966870258,2.53299878168311,0.631719873426831,2.35067065379855,0,0.697801167972428,0,0.527533956456907,0.618831764800233,0.662794751455832,0,0,0.730310090387373,0,0.123121058076788,1.22400414746552,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.50401373190767,1.15877215168659,0,0,0.567208902984407,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,6.02356903572509,1.06400514659507,0.560677600142307,0,0,0,0,0,0.454072282934794,0,0,0.624320153660641,0,2.69007624993242,0.469737994575059,0.971237666208789,0.280901613404497,0.204154171254893,1.22834317311768,2.16984140469107,4.75201142912821,2.71993622206413,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0.877955241761676,0.919463387397059,1.65261864797256,0.113432183160021,0,1.2813443329114,0.211931901159562,0,0.515262646192195,0,0,0.675105328965065,0,0.252433774244115,0.460249493211497,4.68773564774555,0,0.10075209822764,0,0,0,0.286804595389004,0.243947412259191,0.397589304964456,0.348581828608555,0.207322110030741,0,0.36497735907583,0,2.57296375277154,0,2.3218396401599,2.16563844500876,1.0647612003586,1.01150814046861,0.482022059766964,1.43382164552112,0.217879444092406,0.237270619111097,0.269662616320329,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0.983907508344908,0.686271241194102,0,0,0,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0.763976851116555,0,1.71072446022705,0.308482478109971,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,0.542530047399471,0.415941723061614,1.07057393278297,0.315404830067869,1.05427273493442,1.20378439891088,13.6444502433591,4.1389228517002,0,0,1.73767228936166,2.74121620447837,1.37257369524342,0,0,0,0,0,0,0,0,0.561320188866147,0.256278298511402,0,0.160853921143607,5.93672265779964,0,0.532685175939381,0,0,0.116210378459959,2.1754700926492,0.40101294060657,0.276242966807689,1.60740227430449,3.09554985611419,10.3588287817945,0.451199612907412,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,1.31205858279882,0,1.54561517471583,0.0915694648183434,0,0,0.650060246036521,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0,0.255679882248303,0,0,0,0,0,0.464845549297286,0.62962469366128,0,0.308033580176089,0,0,0,0,1.116475108079,0,0,0.511795582622668,2.56763392820352,0,0,0,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0,0,0,0.818999468447914,2.82810863907426,0,0.551365343546124,0,0.438450885253763,1.15755106853338,1.31178950409327,0,0.30982349809975,0,0.143411352204052,0.294747123039363,0,0,2.9555068941673,2.30506425071931,0.379473173765715,0.699869440489966,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0.71623345421307,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0.311039587661807,0,0,0,1.1837208676432,0,0,0,0,1.99613798001194,0.260427761085233,0,0,0,0,0.709163045303809,0,0,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,2.6163087891291,0,0.23056390438806,1.25660702173681,0.217294743844016,1.27600463892768,2.28993983504656,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0,0.141353071433941,0,0,0.176915129006678,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.789168805698781,0,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,2.44617335538842,0,0,0,0,0.678923115418936,0,0,0,0,0,0.195551382734803,0,1.06726497369676,0,0,0,0,0,0,0.471388069233591,0.271808412147228,0,0,0,0.600420288709789,0,0,0,0,2.23425921017803,0,0.717873024576814,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0,0.964518890790115,0.412618309791701,2.07720169014593,0,0,0,0,0,0,0,0,0.191915197319445,3.57347663186684,0,0,1.08599920350743,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,1.06787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.332787154610557,0,0.138348634936231,0.249960815924213,0,0,0.235265819698172,0,0.144921028610825,0,0.467426619694449,0,0,1.0062716070103,0,0,1.05861646634267,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,2.00013882331577,0.686791410365586,0,0,0,0,0,0.22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| ||
|short_description=p@chr22:45931093..45931118,+ | |||
}} | }} |
Latest revision as of 22:04, 28 July 2015
Short description: | p@chr22:45931093..45931118, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:45931093..45931118, + |
Coexpression cluster: | C2649_Osteoblast_Prostate_Fibroblast_Synoviocyte_Adipocyte_left_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 2.78e-09 | 28 |
fibrocyte | 4.34e-09 | 3 |
prostate stromal cell | 4.34e-09 | 3 |
tendon cell | 4.34e-09 | 3 |
fibroblast of gingiva | 6.79e-09 | 5 |
chorionic membrane mesenchymal stem cell | 5.96e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cloaca | 6.47e-11 | 14 |
anal region | 6.47e-11 | 14 |
embryonic cloaca | 6.47e-11 | 14 |
terminal part of digestive tract | 6.47e-11 | 14 |
primitive urogenital sinus | 6.47e-11 | 14 |
proctodeum | 6.47e-11 | 14 |
genitourinary system | 4.36e-10 | 15 |
orifice | 1.67e-09 | 36 |
dense regular connective tissue | 4.34e-09 | 3 |
tendon | 4.34e-09 | 3 |
regular connective tissue | 4.34e-09 | 3 |
prostate gland | 2.90e-08 | 11 |
male accessory sex gland | 2.90e-08 | 11 |
embryonic cloacal epithelium | 2.90e-08 | 11 |
epithelium of hindgut | 2.90e-08 | 11 |
urogenital sinus epithelium | 2.90e-08 | 11 |
prostate bud | 2.90e-08 | 11 |
prostate field | 2.90e-08 | 11 |
egg chorion | 5.96e-08 | 3 |
hindgut | 1.19e-07 | 19 |
sex gland | 1.65e-07 | 12 |
male reproductive gland | 1.65e-07 | 12 |
intermediate mesoderm | 1.95e-07 | 28 |
surface structure | 2.83e-07 | 99 |
organ component layer | 2.86e-07 | 66 |
perirenal fat | 5.63e-07 | 2 |