FFCP PHASE1:Hg19::chr22:46684322..46684357,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:46684322..46684357,- | |||
|description=CAGE_peak_at_chr22:46684322..46684357,- | |description=CAGE_peak_at_chr22:46684322..46684357,- | ||
|id=chr22:46684322..46684357,- | |id=chr22:46684322..46684357,- | ||
|ontology_enrichment_celltype=CL:0000037!2.95e-47!172;CL:0000566!2.95e-47!172;CL:0002032!1.65e-44!165;CL:0000837!1.65e-44!165;CL:0000988!1.85e-44!182;CL:0000738!3.73e-41!140;CL:0002031!2.95e-31!124;CL:0002087!1.05e-28!119;CL:0000763!1.58e-26!112;CL:0000049!1.58e-26!112;CL:0000766!9.34e-20!76;CL:0000839!1.19e-16!70;CL:0000542!4.18e-16!53;CL:0000051!4.18e-16!53;CL:0000838!3.33e-15!52;CL:0000557!4.54e-14!71;CL:0002194!1.07e-10!63;CL:0000576!1.07e-10!63;CL:0000040!1.07e-10!63;CL:0000559!1.07e-10!63;CL:0002009!3.93e-10!65;CL:0000134!5.57e-10!358;CL:0002320!7.71e-10!365;CL:0000945!9.97e-10!24;CL:0000826!9.97e-10!24;CL:0002057!2.33e-09!42;CL:0002274!2.60e-09!5;CL:0000457!2.60e-09!5;CL:0002191!2.60e-09!5;CL:0000097!2.60e-09!5;CL:0000831!2.60e-09!5;CL:0002028!2.60e-09!5;CL:0000860!2.32e-08!45;CL:0000219!3.01e-07!390;CL:0000094!5.98e-07!8;CL:0002393!6.46e-07!9;CL:0002397!6.46e-07!9 | |ontology_enrichment_celltype=CL:0000037!2.95e-47!172;CL:0000566!2.95e-47!172;CL:0002032!1.65e-44!165;CL:0000837!1.65e-44!165;CL:0000988!1.85e-44!182;CL:0000738!3.73e-41!140;CL:0002031!2.95e-31!124;CL:0002087!1.05e-28!119;CL:0000763!1.58e-26!112;CL:0000049!1.58e-26!112;CL:0000766!9.34e-20!76;CL:0000839!1.19e-16!70;CL:0000542!4.18e-16!53;CL:0000051!4.18e-16!53;CL:0000838!3.33e-15!52;CL:0000557!4.54e-14!71;CL:0002194!1.07e-10!63;CL:0000576!1.07e-10!63;CL:0000040!1.07e-10!63;CL:0000559!1.07e-10!63;CL:0002009!3.93e-10!65;CL:0000134!5.57e-10!358;CL:0002320!7.71e-10!365;CL:0000945!9.97e-10!24;CL:0000826!9.97e-10!24;CL:0002057!2.33e-09!42;CL:0002274!2.60e-09!5;CL:0000457!2.60e-09!5;CL:0002191!2.60e-09!5;CL:0000097!2.60e-09!5;CL:0000831!2.60e-09!5;CL:0002028!2.60e-09!5;CL:0000860!2.32e-08!45;CL:0000219!3.01e-07!390;CL:0000094!5.98e-07!8;CL:0002393!6.46e-07!9;CL:0002397!6.46e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.28e-35;5!CL:0000623;9.12e-22;3!CL:0000163;2.27e-19;9!CL:0000775;1.78e-10;3!CL:0000094;1.93e-08;8!CL:0002127;4.10e-08;1!CL:0000911;4.10e-08;1!CL:0000814;4.10e-08;1!CL:0000542;3.35e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.66e-35,5;CL:0002028,1.66e-35,5;CL:0000623,1.02e-21,3;CL:0000825,1.02e-21,3;CL:0002032,1.81e-20,161;CL:0000837,1.81e-20,161;CL:0000163,1.10e-19,9;CL:0000037,1.94e-19,168;CL:0000738,1.72e-18,136;CL:0000988,3.13e-18,177;CL:0002031,3.47e-15,120;CL:0000838,2.81e-14,52;CL:0000542,5.69e-14,53;CL:0000051,5.69e-14,53;CL:0000775,1.62e-10,3;CL:0000094,1.93e-08,8;CL:0000763,2.29e-08,108;CL:0000049,2.29e-08,108;CL:0002127,5.82e-08,1;CL:0000914,5.82e-08,1;CL:0000911,5.82e-08,1;CL:0000814,5.82e-08,1;CL:0002042,5.82e-08,1;CL:0002039,5.82e-08,1;CL:0002040,5.82e-08,1;CL:0002041,5.82e-08,1;CL:0000766,6.48e-08,72;CL:0002087,1.13e-07,115;CL:0000134,6.99e-07,354 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.10e-08;1!CL:0000051;3.35e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!5.44e-12!51;DOID:0060083!5.44e-12!51;DOID:1240!1.36e-09!39;DOID:8692!1.29e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:630;4.10e-08;1!DOID:0050177;4.10e-08;1!DOID:0050427;4.10e-08;1!DOID:1240;5.32e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.96e-10,39;DOID:2531,1.76e-09,51;DOID:0060083,1.76e-09,51;DOID:630,5.07e-08,1;DOID:0050177,5.07e-08,1;DOID:0050427,5.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.51e-20!112;UBERON:0002390!6.17e-20!102;UBERON:0003061!6.17e-20!102;UBERON:0002371!2.75e-12!80;UBERON:0002405!1.51e-11!115;UBERON:0001474!9.36e-11!86;UBERON:0002384!6.95e-10!375;UBERON:0004765!8.32e-08!101;UBERON:0001434!8.32e-08!101 | |ontology_enrichment_uberon=UBERON:0002193!5.51e-20!112;UBERON:0002390!6.17e-20!102;UBERON:0003061!6.17e-20!102;UBERON:0002371!2.75e-12!80;UBERON:0002405!1.51e-11!115;UBERON:0001474!9.36e-11!86;UBERON:0002384!6.95e-10!375;UBERON:0004765!8.32e-08!101;UBERON:0001434!8.32e-08!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.10e-08;1!UBERON:0001154;4.10e-08;1!UBERON:0001153;4.10e-08;1!UBERON:0009854;4.10e-08;1!UBERON:0001961;4.10e-08;1!UBERON:0001744;4.10e-08;1!UBERON:0001042;4.10e-08;1!UBERON:0001735;4.10e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.41e-08,1;UBERON:0001961,4.41e-08,1;UBERON:0001744,4.41e-08,1;UBERON:0001735,4.41e-08,1;UBERON:0001154,6.68e-08,1;UBERON:0001153,6.68e-08,1;UBERON:0001045,6.68e-08,1 | |||
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|short_description=p@chr22:46684322..46684357,- | |short_description=p@chr22:46684322..46684357,- | ||
}} | }} |
Latest revision as of 22:09, 28 July 2015
Short description: | p@chr22:46684322..46684357, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:46684322..46684357, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.66e-35 | 5 |
basophil mast progenitor cell | 1.66e-35 | 5 |
natural killer cell | 1.02e-21 | 3 |
pro-NK cell | 1.02e-21 | 3 |
hematopoietic oligopotent progenitor cell | 1.81e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-20 | 161 |
endocrine cell | 1.10e-19 | 9 |
hematopoietic stem cell | 1.94e-19 | 168 |
leukocyte | 1.72e-18 | 136 |
hematopoietic cell | 3.13e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 3.47e-15 | 120 |
lymphoid lineage restricted progenitor cell | 2.81e-14 | 52 |
lymphocyte | 5.69e-14 | 53 |
common lymphoid progenitor | 5.69e-14 | 53 |
neutrophil | 1.62e-10 | 3 |
granulocyte | 1.93e-08 | 8 |
myeloid cell | 2.29e-08 | 108 |
common myeloid progenitor | 2.29e-08 | 108 |
innate effector T cell | 5.82e-08 | 1 |
immature NK T cell | 5.82e-08 | 1 |
effector T cell | 5.82e-08 | 1 |
mature NK T cell | 5.82e-08 | 1 |
immature NK T cell stage IV | 5.82e-08 | 1 |
immature NK T cell stage I | 5.82e-08 | 1 |
immature NK T cell stage II | 5.82e-08 | 1 |
immature NK T cell stage III | 5.82e-08 | 1 |
myeloid leukocyte | 6.48e-08 | 72 |
nongranular leukocyte | 1.13e-07 | 115 |
mesenchymal cell | 6.99e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
tonsil | 4.41e-08 | 1 |
mucosa-associated lymphoid tissue | 4.41e-08 | 1 |
lymphoid tissue | 4.41e-08 | 1 |
tonsillar ring | 4.41e-08 | 1 |
vermiform appendix | 6.68e-08 | 1 |
caecum | 6.68e-08 | 1 |
midgut | 6.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.96e-10 | 39 |
hematologic cancer | 1.76e-09 | 51 |
immune system cancer | 1.76e-09 | 51 |
genetic disease | 5.07e-08 | 1 |
monogenic disease | 5.07e-08 | 1 |
xeroderma pigmentosum | 5.07e-08 | 1 |