FFCP PHASE1:Hg19::chr2:119593706..119593736,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:119593706..119593736,- | |||
|description=CAGE_peak_at_chr2:119593706..119593736,- | |description=CAGE_peak_at_chr2:119593706..119593736,- | ||
|id=chr2:119593706..119593736,- | |id=chr2:119593706..119593736,- | ||
|ontology_enrichment_celltype=CL:0000057!3.54e-20!75;CL:0002620!3.31e-19!23;CL:0000136!1.24e-14!15;CL:0000055!1.82e-14!180;CL:0002334!5.06e-13!12;CL:0000188!9.45e-10!9;CL:0000077!3.72e-08!19;CL:0002551!9.73e-07!6 | |ontology_enrichment_celltype=CL:0000057!3.54e-20!75;CL:0002620!3.31e-19!23;CL:0000136!1.24e-14!15;CL:0000055!1.82e-14!180;CL:0002334!5.06e-13!12;CL:0000188!9.45e-10!9;CL:0000077!3.72e-08!19;CL:0002551!9.73e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.15e-13;13!CL:0002521;2.50e-12;3!CL:0002559;4.57e-12;5!CL:0002620;4.41e-11;23!CL:0002561;1.42e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.25e-19,15;CL:0002521,2.78e-12,3;CL:0002559,3.55e-12,5;CL:0002620,4.97e-11,23;CL:0002561,1.23e-08,2;CL:0000057,1.85e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!6.07e-20!45;UBERON:0002416!6.07e-20!45;UBERON:0002097!1.55e-15!40;UBERON:0003102!4.78e-10!95;UBERON:0001013!5.89e-10!14;UBERON:0000475!5.99e-10!365;UBERON:0002067!6.79e-10!9;UBERON:0004016!6.79e-10!9;UBERON:0010083!6.79e-10!9;UBERON:0003688!1.13e-07!6;UBERON:0002358!1.13e-07!6;UBERON:0003684!1.13e-07!6;UBERON:0001178!1.13e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.50e-12;14!UBERON:0002190;2.50e-12;3!UBERON:0002073;4.57e-12;5!UBERON:0002199;3.07e-10;46!UBERON:0002416;3.07e-10;46!UBERON:0003102;4.23e-09;50!UBERON:0005933;1.42e-08;2!UBERON:0005942;1.42e-08;2!UBERON:0005932;1.42e-08;2!UBERON:0001134;1.13e-07;16!UBERON:0002036;1.13e-07;16!UBERON:0002097;1.23e-07;41!UBERON:0002072;1.49e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.51e-16,46;UBERON:0002416,1.51e-16,46;UBERON:0001013,1.07e-12,14;UBERON:0002190,2.78e-12,3;UBERON:0002073,3.55e-12,5;UBERON:0005086,3.55e-12,5;UBERON:0002097,4.97e-12,41;UBERON:0003102,9.30e-09,99;UBERON:0005933,1.23e-08,2;UBERON:0005942,1.23e-08,2;UBERON:0005932,1.23e-08,2;UBERON:0002072,1.58e-07,5 | |||
|phase1_expression=0.54503513781167,1.92690471501885,0.563817616383885,3.00219895059391,1.78784437770915,0,2.53299878168311,1.26343974685366,3.91778442299758,0,0,0,0,0,1.98838425436749,0,0,0,0,0.738726348460727,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.468642863667593,1.24864030732128,0.570471821544449,0.896692083310806,0.117434498643765,0.323745888736263,0.98315564691574,0,0,0.103325781175765,0,0.989067717114227,1.82032272387605,0.718618141816238,0,0.125118519871964,0,0,0.919463387397059,1.50238058906597,0,0.538168907066586,1.06778694409284,0.423863802319124,1.50045548042201,0.824420233907511,1.54584324027377,0.930584281657949,0.506328996723799,0.779496041289589,1.26216887122057,1.10459878370759,1.93975268182574,1.06502877754984,0.302256294682921,0,0,0,0,0.121973706129595,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,2.78620756819187,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,2.1100756394171,0.871533458600294,0.599837947092342,0,0,0,0,0,1.42636905040718,0.723906533337896,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.415941723061614,1.07057393278297,2.52323864054295,1.52283839490527,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,1.73675465473144,1.2276957863045,0.841980283299221,0.512556597022804,1.02341449813341,0.64341568457443,2.96836132889982,0.308419387605311,0.355123450626254,0.821271560138091,0.519254429183621,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,1.00726411300178,0.660075999364704,0,0,0,0.48335359146061,1.23238893691716,0.307007349452259,0.827019434907183,0.859361958946189,0.580066775656914,1.02271952899321,0.267096106940212,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0.658589785919804,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65898574505602,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0,0,2.23581842213102,0,0,0,0,0,0,0,0,0,4.10657903743086,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0.129282956361551,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,1.08803560673895,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.248385611765534,0,0,0,0.285465333544967,1.17632909849086,0,0,0,0.934853239388898,0.554805861502613,0,0,0,0.457680136793847,0.302461847526478,0.310874401165561,0,0,0,0,0,0,0,0.450772826991655,0.380805212168795,0,0,0,0,0,0.800055529326307,1.71697852591396,1.6837474438296,0,0.192619830407303,3.00218227924896,0.521988583930423,0.453411851024545,0.231522474323834,1.71315693154527,0,2.77921302444875,5.70138528904638,0,0.192914038270915,0.506827321959218,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0.472775363535873,0.667388411352415,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,1.23195368227496,0,0,0,0,4.40004335877004,0,0.109940516745429,0,0,0,0,0,0,0,0.891139200981258,0.4226557275834,0.849635573439084,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,1.73050624849516,0,0,0,0,0.26721740526556,0,0.250707539292375,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0.143444410785353,0,1.22104902916462,0,1.9307228228694,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,1.92690471501885,0.563817616383885,3.00219895059391,1.78784437770915,0,2.53299878168311,1.26343974685366,3.91778442299758,0,0,0,0,0,1.98838425436749,0,0,0,0,0.738726348460727,0.408001382488506,0.626909442956176,0,0.136874425072884,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.468642863667593,1.24864030732128,0.570471821544449,0.896692083310806,0.117434498643765,0.323745888736263,0.98315564691574,0,0,0.103325781175765,0,0.989067717114227,1.82032272387605,0.718618141816238,0,0.125118519871964,0,0,0.919463387397059,1.50238058906597,0,0.538168907066586,1.06778694409284,0.423863802319124,1.50045548042201,0.824420233907511,1.54584324027377,0.930584281657949,0.506328996723799,0.779496041289589,1.26216887122057,1.10459878370759,1.93975268182574,1.06502877754984,0.302256294682921,0,0,0,0,0.121973706129595,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,2.78620756819187,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,2.1100756394171,0.871533458600294,0.599837947092342,0,0,0,0,0,1.42636905040718,0.723906533337896,0.410952645100767,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.415941723061614,1.07057393278297,2.52323864054295,1.52283839490527,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,1.73675465473144,1.2276957863045,0.841980283299221,0.512556597022804,1.02341449813341,0.64341568457443,2.96836132889982,0.308419387605311,0.355123450626254,0.821271560138091,0.519254429183621,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,1.00726411300178,0.660075999364704,0,0,0,0.48335359146061,1.23238893691716,0.307007349452259,0.827019434907183,0.859361958946189,0.580066775656914,1.02271952899321,0.267096106940212,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0.658589785919804,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65898574505602,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0,0,2.23581842213102,0,0,0,0,0,0,0,0,0,4.10657903743086,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0.129282956361551,0.39669780522807,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,1.08803560673895,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0.248385611765534,0,0,0,0.285465333544967,1.17632909849086,0,0,0,0.934853239388898,0.554805861502613,0,0,0,0.457680136793847,0.302461847526478,0.310874401165561,0,0,0,0,0,0,0,0.450772826991655,0.380805212168795,0,0,0,0,0,0.800055529326307,1.71697852591396,1.6837474438296,0,0.192619830407303,3.00218227924896,0.521988583930423,0.453411851024545,0.231522474323834,1.71315693154527,0,2.77921302444875,5.70138528904638,0,0.192914038270915,0.506827321959218,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0.472775363535873,0.667388411352415,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,1.23195368227496,0,0,0,0,4.40004335877004,0,0.109940516745429,0,0,0,0,0,0,0,0.891139200981258,0.4226557275834,0.849635573439084,0,0,0,0.178553938605658,0,0,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,1.73050624849516,0,0,0,0,0.26721740526556,0,0.250707539292375,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,0.143444410785353,0,1.22104902916462,0,1.9307228228694,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr2:119593706..119593736,- | |short_description=p@chr2:119593706..119593736,- | ||
}} | }} |
Latest revision as of 23:50, 28 July 2015
Short description: | p@chr2:119593706..119593736, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:119593706..119593736, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.25e-19 | 15 |
subcutaneous fat cell | 2.78e-12 | 3 |
hair follicle cell | 3.55e-12 | 5 |
skin fibroblast | 4.97e-11 | 23 |
outer root sheath cell | 1.23e-08 | 2 |
fibroblast | 1.85e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
integument | 1.51e-16 | 46 |
integumental system | 1.51e-16 | 46 |
adipose tissue | 1.07e-12 | 14 |
subcutaneous adipose tissue | 2.78e-12 | 3 |
hair follicle | 3.55e-12 | 5 |
hair follicle placode | 3.55e-12 | 5 |
skin of body | 4.97e-12 | 41 |
surface structure | 9.30e-09 | 99 |
hair root sheath | 1.23e-08 | 2 |
hair outer root sheath | 1.23e-08 | 2 |
bulb of hair follicle | 1.23e-08 | 2 |
hypodermis | 1.58e-07 | 5 |