FFCP PHASE1:Hg19::chr2:136664715..136664723,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:136664715..136664723,-
|short_description=p@chr2:136664715..136664723,-
|description=CAGE_peak_at_chr2:136664715..136664723,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:136664715..136664723,- | |||
|description=CAGE_peak_at_chr2:136664715..136664723,- | |||
|id=chr2:136664715..136664723,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;9.72e-14;1!CL:0000911;9.72e-14;1!CL:0000814;9.72e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.61e-13,1;CL:0000914,1.61e-13,1;CL:0000911,1.61e-13,1;CL:0000814,1.61e-13,1;CL:0002042,1.61e-13,1;CL:0002039,1.61e-13,1;CL:0002040,1.61e-13,1;CL:0002041,1.61e-13,1;CL:0000893,2.12e-07,2;CL:0002489,2.12e-07,2;CL:0000809,2.12e-07,2;CL:0000808,2.12e-07,2;CL:0000894,2.12e-07,2;CL:0000806,2.12e-07,2;CL:0000807,2.12e-07,2;CL:0000805,2.12e-07,2;CL:0002425,2.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.64e-07;2 | |||
|ontology_enrichment_disease=DOID:14566!1.79e-17!239;DOID:162!5.51e-16!235;DOID:0050687!1.56e-11!143;DOID:305!9.29e-08!106;DOID:2531!2.12e-07!51;DOID:0060083!2.12e-07!51;DOID:0050686!5.59e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:4468;9.24e-08;2!DOID:154;1.64e-07;2!DOID:4236;1.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,9.25e-08,2;DOID:154,1.28e-07,2;DOID:4236,1.28e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;9.72e-14;1!UBERON:0006518;9.72e-14;1!UBERON:0008949;9.72e-14;1!UBERON:0000101;9.72e-14;1!UBERON:0002167;9.72e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.15e-14,1;UBERON:0006518,5.15e-14,1;UBERON:0008949,5.15e-14,1;UBERON:0000101,5.15e-14,1;UBERON:0002167,5.15e-14,1 | |||
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| ||
|short_description=p@chr2:136664715..136664723,- | |||
}} | }} |
Latest revision as of 00:35, 29 July 2015
Short description: | p@chr2:136664715..136664723, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:136664715..136664723, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.61e-13 | 1 |
immature NK T cell | 1.61e-13 | 1 |
effector T cell | 1.61e-13 | 1 |
mature NK T cell | 1.61e-13 | 1 |
immature NK T cell stage IV | 1.61e-13 | 1 |
immature NK T cell stage I | 1.61e-13 | 1 |
immature NK T cell stage II | 1.61e-13 | 1 |
immature NK T cell stage III | 1.61e-13 | 1 |
thymocyte | 2.12e-07 | 2 |
double negative thymocyte | 2.12e-07 | 2 |
double-positive, alpha-beta thymocyte | 2.12e-07 | 2 |
DN4 thymocyte | 2.12e-07 | 2 |
DN1 thymic pro-T cell | 2.12e-07 | 2 |
DN2 thymocyte | 2.12e-07 | 2 |
DN3 thymocyte | 2.12e-07 | 2 |
immature single positive thymocyte | 2.12e-07 | 2 |
early T lineage precursor | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.15e-14 | 1 |
right lung lobe | 5.15e-14 | 1 |
lower lobe of lung | 5.15e-14 | 1 |
lobe of lung | 5.15e-14 | 1 |
right lung | 5.15e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 9.25e-08 | 2 |
mixed cell type cancer | 1.28e-07 | 2 |
carcinosarcoma | 1.28e-07 | 2 |