FFCP PHASE1:Hg19::chr2:151326054..151326068,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:151326054..151326068,- | |||
|coexpression_cluster_id=C2662 | |||
|description=CAGE_peak_at_chr2:151326054..151326068,- | |description=CAGE_peak_at_chr2:151326054..151326068,- | ||
|id=chr2:151326054..151326068,- | |id=chr2:151326054..151326068,- | ||
|ontology_enrichment_celltype=CL:0000548!1.95e-09!679;CL:0000004!1.95e-09!679;CL:0000255!1.95e-09!679;CL:0000012!4.64e-09!682;CL:0000220!1.84e-08!246;CL:0002321!2.07e-08!248;CL:0000055!2.22e-08!180;CL:0000057!1.11e-07!75;CL:0000077!2.04e-07!19 | |ontology_enrichment_celltype=CL:0000548!1.95e-09!679;CL:0000004!1.95e-09!679;CL:0000255!1.95e-09!679;CL:0000012!4.64e-09!682;CL:0000220!1.84e-08!246;CL:0002321!2.07e-08!248;CL:0000055!2.22e-08!180;CL:0000057!1.11e-07!75;CL:0000077!2.04e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.26e-14;55!CL:0000048;5.22e-13;58!CL:0000723;1.26e-11;61!CL:0000569;4.45e-10;4!CL:0000034;7.38e-10;69!CL:0002622;2.61e-08;3!CL:0002537;4.29e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,6.43e-10,4;CL:0000011,6.43e-10,4;CL:0002622,2.15e-08,3;CL:0002537,6.35e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000011;4.45e-10;4 | |||
|ontology_enrichment_disease=DOID:2394!2.25e-10!14;DOID:120!4.25e-10!27;DOID:193!6.03e-10!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.43e-14;14!DOID:0060084;1.72e-08;3!DOID:127;1.72e-08;3!DOID:120;7.45e-08;27!DOID:193;3.70e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.69e-14,14;DOID:0060084,1.13e-08,3;DOID:127,1.13e-08,3;DOID:120,8.91e-08,27;DOID:193,4.36e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0003102!3.31e-10!95;UBERON:0002367!4.16e-07!11;UBERON:0010147!4.16e-07!11;UBERON:0009846!4.16e-07!11;UBERON:0003353!4.16e-07!11;UBERON:0004902!4.16e-07!11;UBERON:0003820!4.16e-07!11;UBERON:0009847!4.16e-07!11;UBERON:0004923!7.09e-07!57;UBERON:0005156!7.72e-07!59;UBERON:0000990!7.72e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.45e-08;10!UBERON:0000158;2.45e-08;10!UBERON:0002367;3.26e-07;11!UBERON:0010147;3.26e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,2.06e-07,59;UBERON:0000990,2.06e-07,59;UBERON:0002367,2.27e-07,11;UBERON:0010147,2.27e-07,11;UBERON:0009846,2.27e-07,11;UBERON:0003353,2.27e-07,11;UBERON:0004902,2.27e-07,11;UBERON:0003820,2.27e-07,11;UBERON:0009847,2.27e-07,11 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,1.0007329835313,0.893922188854576,1.74467704820074,0,1.89515962028049,0.261185628199839,0,0,0,0,0.37129905888014,0,0.672325146451775,0,1.46062018077475,0.975865597581014,0,0.204000691244253,0,0,0.136874425072884,0,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.869079113764942,0,0.486634870302636,0.378139268656271,1.55210578223795,0.351339142772504,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.794455084879313,0.573673241497627,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0.936480230490962,0,0.747243402759005,0,0,0.140450806702248,0.408308342509787,0.491337269247072,0.206651562351531,2.37600571456411,4.45080472701402,0,0,0,0.375355559615893,0.277064115484183,0,3.37136575378922,0.751190294532984,0.226864366320042,0.89694817844431,0.85422955527427,1.27159140695737,0.900273288253207,0,1.28820270022815,0.744467425326359,0.337552664482532,0.292311015483596,0.504867548488229,0.552299391853796,0.161646056818812,0.355009592516614,0.201504196455281,0.339121184620975,0.193260853163297,0.545492241181669,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0.36497735907583,0,1.92972281457866,0,0,1.44375896333917,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0.653638332277218,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,1.44331342025273,0.34779121492523,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,2.81201501960331,0.503946384596579,0.283550194484773,0.447792613514241,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0.845302752556,2.12750493267896,1.04007436911366,0,0,0,0.285955987316295,0,0.823240336780769,0,1.06617584622764,0.791951872933429,1.50719688529793,0.871533458600294,3.29910870900788,0,0,0,1.4377491329495,0,0,1.30303176000821,1.43833425785268,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,3.32753378449291,3.7470087647404,1.10391690523754,0.468565659970853,0,0,0,0,0,0.695068915744663,0,0,0,0,0,0,0,0,0,0,1.12264037773229,0.512556597022804,0,0.321707842287215,2.96836132889982,0.616838775210622,0.887808626565635,0,0,0.348631135379878,0.362578348774867,1.60405176242628,1.19705285616665,1.60740227430449,4.00600569614778,3.14698595902618,0,0.15403067420883,0,0,0.527758144464379,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.275673144969061,0,0.290033387828457,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.255225424989168,0.2023155617111,3.71876439437829,1.5740617341532,0,0,0,0,0,0.143124886741991,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,1.43897966066652,0.274537029736055,0.824686816419805,0.202182481573316,3.17020642346017,0,0,2.19342140668156,0,0.682499557039929,1.83827061539827,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,3.90237170477658,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.36408156524854,0,0,2.62618933211459,0,2.45728561679386,0,0,0.445234820091624,0,0,0.398495976502139,0,0,0.102268682502155,0,1.55519793830904,0,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0.219385397153973,0.32681539055697,1.11538995422883,0.0769502585037971,1.25336261431701,0,0,0,6.06102203490647,1.28236630762607,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0.489698424477443,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0.694238953340524,0.293977192243133,0,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,1.39866726707491,0,0,0,0,0.124252535565433,1.17847017308398,0,0,0.101998217636322,0,0,0,0,0.859530882839914,0.525774708558629,0.279282401272254,0.458320848023367,1.43574604915363,0.199679000498991,0,0,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0,0.321506296930038,0.412618309791701,1.24632101408756,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,6.51599522104455,9.50643640321395,1.63293680054705,0,0,1.02232813071253,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0.886068179966986,0,0,0,0,0,0,0.124980407962107,0,0.5709306670899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| ||
|short_description=p@chr2:151326054..151326068,- | |short_description=p@chr2:151326054..151326068,- | ||
}} | }} |
Latest revision as of 01:14, 29 July 2015
Short description: | p@chr2:151326054..151326068, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:151326054..151326068, - |
Coexpression cluster: | C2662_Fibroblast_mesenchymal_cervical_leiomyoma_Smooth_Mesothelial_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 6.43e-10 | 4 |
migratory trunk neural crest cell | 6.43e-10 | 4 |
prostate stromal cell | 2.15e-08 | 3 |
amnion mesenchymal stem cell | 6.35e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 2.06e-07 | 59 |
reproductive system | 2.06e-07 | 59 |
prostate gland | 2.27e-07 | 11 |
male accessory sex gland | 2.27e-07 | 11 |
embryonic cloacal epithelium | 2.27e-07 | 11 |
epithelium of hindgut | 2.27e-07 | 11 |
urogenital sinus epithelium | 2.27e-07 | 11 |
prostate bud | 2.27e-07 | 11 |
prostate field | 2.27e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.69e-14 | 14 |
cell type benign neoplasm | 1.13e-08 | 3 |
leiomyoma | 1.13e-08 | 3 |
female reproductive organ cancer | 8.91e-08 | 27 |
reproductive organ cancer | 4.36e-07 | 29 |