FFCP PHASE1:Hg19::chr2:159994500..159994523,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:159994500..159994523,+ | |||
|coexpression_cluster_id=C2664 | |coexpression_cluster_id=C2664 | ||
|description=CAGE_peak_at_chr2:159994500..159994523,+ | |description=CAGE_peak_at_chr2:159994500..159994523,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000150!1.89e-07!9;CL:0002076!4.49e-07!43;CL:0000622!9.56e-07!5 | |ontology_enrichment_celltype=CL:0000150!1.89e-07!9;CL:0002076!4.49e-07!43;CL:0000622!9.56e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002589;6.31e-13;2!CL:0000317;8.51e-13;2!CL:1000448;8.51e-13;2!CL:0002308;8.51e-13;2!CL:0002140;8.51e-13;2!CL:0000622;4.24e-11;5!CL:0000150;1.09e-10;9!CL:0000154;2.49e-09;6!CL:0002581;4.74e-07;1 | |ontology_enrichment_celltype_v019=CL:0002589;6.31e-13;2!CL:0000317;8.51e-13;2!CL:1000448;8.51e-13;2!CL:0002308;8.51e-13;2!CL:0002140;8.51e-13;2!CL:0000622;4.24e-11;5!CL:0000150;1.09e-10;9!CL:0000154;2.49e-09;6!CL:0002581;4.74e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002589,5.60e-13,2;CL:0000317,5.95e-13,2;CL:1000448,5.95e-13,2;CL:0002308,5.95e-13,2;CL:0002140,5.95e-13,2;CL:0000622,3.89e-11,5;CL:0000150,1.01e-10,9;CL:0000154,2.32e-09,6;CL:0002581,4.89e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;4.74e-07;1!UBERON:0004874;4.74e-07;1 | |ontology_enrichment_development_v019=UBERON:0010226;4.74e-07;1!UBERON:0004874;4.74e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3350;4.96e-13;2!DOID:6193;1.16e-07;1!DOID:8552;1.49e-07;1!DOID:3571;4.74e-07;1 | |ontology_enrichment_disease_v019=DOID:3350;4.96e-13;2!DOID:6193;1.16e-07;1!DOID:8552;1.49e-07;1!DOID:3571;4.74e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3350,3.46e-13,2;DOID:6193,1.20e-07,1;DOID:8552,1.74e-07,1;DOID:3571,3.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!4.11e-09!27;UBERON:0002342!4.55e-09!14;UBERON:0005062!4.55e-09!14 | |ontology_enrichment_uberon=UBERON:0007100!4.11e-09!27;UBERON:0002342!4.55e-09!14;UBERON:0005062!4.55e-09!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001529;6.31e-13;2!UBERON:0007204;6.31e-13;2!UBERON:0002419;8.51e-13;2!UBERON:0007771;8.51e-13;2!UBERON:0003297;8.51e-13;2!UBERON:0001821;8.51e-13;2!UBERON:0003487;8.51e-13;2!UBERON:0001820;8.51e-13;2!UBERON:0007029;4.74e-07;1!UBERON:0002084;4.74e-07;1!UBERON:0000989;4.74e-07;1!UBERON:0008811;4.74e-07;1!UBERON:0002082;4.74e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001529;6.31e-13;2!UBERON:0007204;6.31e-13;2!UBERON:0002419;8.51e-13;2!UBERON:0007771;8.51e-13;2!UBERON:0003297;8.51e-13;2!UBERON:0001821;8.51e-13;2!UBERON:0003487;8.51e-13;2!UBERON:0001820;8.51e-13;2!UBERON:0007029;4.74e-07;1!UBERON:0002084;4.74e-07;1!UBERON:0000989;4.74e-07;1!UBERON:0008811;4.74e-07;1!UBERON:0002082;4.74e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,5.60e-13,2;UBERON:0007204,5.60e-13,2;UBERON:0002419,5.95e-13,2;UBERON:0007771,5.95e-13,2;UBERON:0003297,5.95e-13,2;UBERON:0001821,5.95e-13,2;UBERON:0003487,5.95e-13,2;UBERON:0001820,5.95e-13,2;UBERON:0005089,5.95e-13,2;UBERON:0005088,5.95e-13,2;UBERON:0002084,3.02e-07,1;UBERON:0002082,3.02e-07,1;UBERON:0010226,3.02e-07,1;UBERON:0000989,4.60e-07,1;UBERON:0008811,4.60e-07,1;UBERON:0006258,4.60e-07,1;UBERON:0005876,4.60e-07,1;UBERON:0004874,4.60e-07,1;UBERON:0007029,5.19e-07,1 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,2.25095607382472,0,0,0,4.2699598291882,1.2333377420858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,1.03056216018252,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,3.90036147621913,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0.2023155617111,0,0,0,0.616067160352178,0,0,4.44778125849408,1.5743737541619,0,0,0,0,0,0,0,0,0,0,0,3.17020642346017,0,0,0.487426979262569,0,0,0,0,0,2.65375590096488,2.63070531152258,0,0,0.811641507850816,0,0,0,0,0.35667105148125,0,0.422215270595328,0,0,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,2.70455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,1.15425387755696,0,0,0,0,0,0,0,0,0,4.15529204750391,0,0,0,0,4.4502242114506,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,5.50355303909173,0,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0.717873024576814,0.599037001496973,1.71690419254628,0.446342914883745,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,1.98627591109629,0,0,0,0,0,8.94808476167795,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,3.85994864474866,0,0.680117776536817,0,0,0,4.94082315457555,0.219284049578707,0,0,4.56144589763296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0,0,0,0,0,0,0,0.207216164163037,0,1.38251932362818,0,0,0,0,3.6657098967048,0,0,0,7.36126752114322,0,0,0,0,1.45713297917742,0,0,0,5.53435801990904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0.0645889098360061,0,0,0,0,1.74173398317569,0.342233301085281,0.202056159043763,0,0,0,0,0,0,0,0.366724332548599,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,2.25095607382472,0,0,0,4.2699598291882,1.2333377420858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,1.03056216018252,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,1.48418066444991,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,3.90036147621913,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0,0.2023155617111,0,0,0,0.616067160352178,0,0,4.44778125849408,1.5743737541619,0,0,0,0,0,0,0,0,0,0,0,3.17020642346017,0,0,0.487426979262569,0,0,0,0,0,2.65375590096488,2.63070531152258,0,0,0.811641507850816,0,0,0,0,0.35667105148125,0,0.422215270595328,0,0,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,2.70455678475983,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,1.15425387755696,0,0,0,0,0,0,0,0,0,4.15529204750391,0,0,0,0,4.4502242114506,0,0,0,0.432777279484182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,5.50355303909173,0,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0.717873024576814,0.599037001496973,1.71690419254628,0.446342914883745,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0.0788057072991982,0,0,0,0,0,1.98627591109629,0,0,0,0,0,8.94808476167795,0,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,3.85994864474866,0,0.680117776536817,0,0,0,4.94082315457555,0.219284049578707,0,0,4.56144589763296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0,0,0,0,0,0,0,0.207216164163037,0,1.38251932362818,0,0,0,0,3.6657098967048,0,0,0,7.36126752114322,0,0,0,0,1.45713297917742,0,0,0,5.53435801990904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0.0645889098360061,0,0,0,0,1.74173398317569,0.342233301085281,0.202056159043763,0,0,0,0,0,0,0,0.366724332548599,0.813792356631477,0,0,0 | ||
|short_description=p@chr2:159994500..159994523,+ | |short_description=p@chr2:159994500..159994523,+ | ||
}} | }} |
Latest revision as of 01:45, 29 July 2015
Short description: | p@chr2:159994500..159994523, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:159994500..159994523, + |
Coexpression cluster: | C2664_leukemia_signet_epithelioid_chronic_acute_small_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 5.60e-13 | 2 |
sebum secreting cell | 5.95e-13 | 2 |
epithelial cell of sweat gland | 5.95e-13 | 2 |
epithelial cell of skin gland | 5.95e-13 | 2 |
acinar cell of sebaceous gland | 5.95e-13 | 2 |
acinar cell | 3.89e-11 | 5 |
glandular epithelial cell | 1.01e-10 | 9 |
protein secreting cell | 2.32e-09 | 6 |
perirenal preadipocyte | 4.89e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 5.60e-13 | 2 |
brachiocephalic vasculature | 5.60e-13 | 2 |
skin gland | 5.95e-13 | 2 |
epidermis gland | 5.95e-13 | 2 |
gland of integumental system | 5.95e-13 | 2 |
sebaceous gland | 5.95e-13 | 2 |
skin sebaceous gland | 5.95e-13 | 2 |
sweat gland | 5.95e-13 | 2 |
sweat gland placode | 5.95e-13 | 2 |
sebaceous gland placode | 5.95e-13 | 2 |
heart left ventricle | 3.02e-07 | 1 |
cardiac ventricle | 3.02e-07 | 1 |
future cardiac ventricle | 3.02e-07 | 1 |
penis | 4.60e-07 | 1 |
intromittent organ | 4.60e-07 | 1 |
lateral plate mesenchyme | 4.60e-07 | 1 |
undifferentiated genital tubercle | 4.60e-07 | 1 |
somatopleure | 4.60e-07 | 1 |
surface | 5.19e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 3.46e-13 | 2 |
epithelioid sarcoma | 1.20e-07 | 1 |
chronic myeloid leukemia | 1.74e-07 | 1 |
liver cancer | 3.21e-07 | 1 |