FFCP PHASE1:Hg19::chr2:180114615..180114617,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:180114615..180114617,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr2:180114615..180114617,- | |description=CAGE_peak_at_chr2:180114615..180114617,- | ||
|id=chr2:180114615..180114617,- | |id=chr2:180114615..180114617,- | ||
|ontology_enrichment_celltype=CL:0002057!1.05e-14!42;CL:0000860!3.59e-13!45;CL:0002194!2.11e-12!63;CL:0000576!2.11e-12!63;CL:0000040!2.11e-12!63;CL:0000559!2.11e-12!63;CL:0002009!9.84e-12!65;CL:0000766!2.38e-10!76;CL:0000839!3.04e-10!70;CL:0000557!5.67e-10!71;CL:0002087!9.97e-09!119;CL:0000738!2.35e-07!140 | |ontology_enrichment_celltype=CL:0002057!1.05e-14!42;CL:0000860!3.59e-13!45;CL:0002194!2.11e-12!63;CL:0000576!2.11e-12!63;CL:0000040!2.11e-12!63;CL:0000559!2.11e-12!63;CL:0002009!9.84e-12!65;CL:0000766!2.38e-10!76;CL:0000839!3.04e-10!70;CL:0000557!5.67e-10!71;CL:0002087!9.97e-09!119;CL:0000738!2.35e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0002393;6.61e-26;6!CL:0002397;6.61e-26;6!CL:0002591;8.72e-18;1!CL:0000576;5.83e-12;48!CL:0000860;6.65e-12;33!CL:0002057;6.65e-12;33!CL:0000766;6.64e-11;69!CL:0000473;2.56e-09;39!CL:0000234;2.56e-09;39!CL:0002087;3.94e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.21e-25,42;CL:0002057,8.21e-25,42;CL:0000473,1.17e-21,48;CL:0000234,1.17e-21,48;CL:0002591,1.44e-17,1;CL:0002393,1.62e-17,9;CL:0002397,1.62e-17,9;CL:0002194,3.13e-17,59;CL:0000576,3.13e-17,59;CL:0000040,3.13e-17,59;CL:0000559,3.13e-17,59;CL:0002009,1.17e-16,61;CL:0000839,2.23e-15,66;CL:0000557,3.83e-15,67;CL:0000766,4.53e-14,72;CL:0002087,6.29e-11,115;CL:0002031,1.91e-10,120;CL:0000763,3.15e-09,108;CL:0000049,3.15e-09,108;CL:0000738,3.90e-09,136;CL:0002032,1.34e-07,161;CL:0000837,1.34e-07,161;CL:0000037,2.99e-07,168;CL:0000988,7.67e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.80e-18;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-09!102;UBERON:0003061!2.21e-09!102;UBERON:0002193!2.84e-08!112;UBERON:0002371!7.00e-08!80;UBERON:0001893!1.23e-07!34;UBERON:0002619!1.84e-07!22;UBERON:0001950!2.48e-07!20;UBERON:0002791!3.58e-07!33;UBERON:0000956!3.64e-07!25;UBERON:0000203!3.64e-07!25;UBERON:0002020!6.82e-07!34;UBERON:0003528!6.82e-07!34;UBERON:0001474!9.14e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!2.21e-09!102;UBERON:0003061!2.21e-09!102;UBERON:0002193!2.84e-08!112;UBERON:0002371!7.00e-08!80;UBERON:0001893!1.23e-07!34;UBERON:0002619!1.84e-07!22;UBERON:0001950!2.48e-07!20;UBERON:0002791!3.58e-07!33;UBERON:0000956!3.64e-07!25;UBERON:0000203!3.64e-07!25;UBERON:0002020!6.82e-07!34;UBERON:0003528!6.82e-07!34;UBERON:0001474!9.14e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.44e-09;2!UBERON:0002012;1.44e-09;2!UBERON:0008886;1.44e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.60e-13,76;UBERON:0001474,2.62e-12,82;UBERON:0004765,3.56e-11,90;UBERON:0002405,8.45e-11,93;UBERON:0002390,3.18e-10,98;UBERON:0003061,3.18e-10,98;UBERON:0001434,5.22e-10,100;UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2;UBERON:0002193,3.15e-09,108;UBERON:0002204,2.72e-07,167 | |||
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| ||
|short_description=p@chr2:180114615..180114617,- | |short_description=p@chr2:180114615..180114617,- | ||
}} | }} |
Latest revision as of 03:53, 29 July 2015
Short description: | p@chr2:180114615..180114617, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:180114615..180114617, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.21e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.21e-25 | 42 |
defensive cell | 1.17e-21 | 48 |
phagocyte | 1.17e-21 | 48 |
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
intermediate monocyte | 1.62e-17 | 9 |
CD14-positive, CD16-positive monocyte | 1.62e-17 | 9 |
monopoietic cell | 3.13e-17 | 59 |
monocyte | 3.13e-17 | 59 |
monoblast | 3.13e-17 | 59 |
promonocyte | 3.13e-17 | 59 |
macrophage dendritic cell progenitor | 1.17e-16 | 61 |
myeloid lineage restricted progenitor cell | 2.23e-15 | 66 |
granulocyte monocyte progenitor cell | 3.83e-15 | 67 |
myeloid leukocyte | 4.53e-14 | 72 |
nongranular leukocyte | 6.29e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.91e-10 | 120 |
myeloid cell | 3.15e-09 | 108 |
common myeloid progenitor | 3.15e-09 | 108 |
leukocyte | 3.90e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.34e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-07 | 161 |
hematopoietic stem cell | 2.99e-07 | 168 |
hematopoietic cell | 7.67e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.60e-13 | 76 |
bone element | 2.62e-12 | 82 |
skeletal element | 3.56e-11 | 90 |
immune system | 8.45e-11 | 93 |
hematopoietic system | 3.18e-10 | 98 |
blood island | 3.18e-10 | 98 |
skeletal system | 5.22e-10 | 100 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.86e-09 | 2 |
developing epithelial placode | 1.86e-09 | 2 |
respiratory system arterial blood vessel | 1.86e-09 | 2 |
respiratory system blood vessel | 1.86e-09 | 2 |
respiratory system artery | 1.86e-09 | 2 |
head blood vessel | 1.86e-09 | 2 |
pulmonary artery | 1.86e-09 | 2 |
pulmonary vascular system | 1.86e-09 | 2 |
pharyngeal vasculature | 1.86e-09 | 2 |
truncus arteriosus | 1.86e-09 | 2 |
aortic sac | 1.86e-09 | 2 |
pharyngeal arch artery | 1.86e-09 | 2 |
hemolymphoid system | 3.15e-09 | 108 |
musculoskeletal system | 2.72e-07 | 167 |