FFCP PHASE1:Hg19::chr2:181751144..181751146,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:181751144..181751146,+ | |||
|coexpression_cluster_id=C321 | |||
|description=CAGE_peak_at_chr2:181751144..181751146,+ | |description=CAGE_peak_at_chr2:181751144..181751146,+ | ||
|id=chr2:181751144..181751146,+ | |id=chr2:181751144..181751146,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000214;2.39e-66;3!CL:0000153;2.62e-23;9!CL:0000447;2.62e-23;9!CL:0000327;1.22e-14;15!CL:0000499;1.52e-08;28!CL:0002078;2.32e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,2.39e-66,3;CL:0000153,2.62e-23,9;CL:0000447,2.62e-23,9;CL:0000327,1.22e-14,15;CL:0000499,1.52e-08,28;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.76e-09!8;DOID:0060085!4.54e-09!1;DOID:3165!4.54e-09!1;DOID:0060121!4.54e-09!1;DOID:2438!4.54e-09!1;DOID:4418!4.54e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1115;2.29e-11;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,2.29e-11,20 | |||
|ontology_enrichment_uberon=UBERON:0002771!6.26e-24!3;UBERON:0000200!3.43e-21!6;UBERON:0002619!1.13e-20!22;UBERON:0002020!1.94e-20!34;UBERON:0003528!1.94e-20!34;UBERON:0000956!3.61e-18!25;UBERON:0000203!3.61e-18!25;UBERON:0001869!1.11e-17!32;UBERON:0001950!1.89e-17!20;UBERON:0002791!4.01e-17!33;UBERON:0001893!1.35e-16!34;UBERON:0002780!1.32e-13!41;UBERON:0001890!1.32e-13!41;UBERON:0006240!1.32e-13!41;UBERON:0003080!2.94e-13!42;UBERON:0001049!1.07e-11!57;UBERON:0005068!1.07e-11!57;UBERON:0006241!1.07e-11!57;UBERON:0007135!1.07e-11!57;UBERON:0002616!2.97e-11!59;UBERON:0002346!4.56e-10!90;UBERON:0002702!1.74e-09!1;UBERON:0001871!2.53e-09!7;UBERON:0000955!2.92e-09!69;UBERON:0006238!2.92e-09!69;UBERON:0003112!5.75e-09!1;UBERON:0000032!5.75e-09!1;UBERON:0005253!5.75e-09!1;UBERON:0003128!5.75e-09!1;UBERON:0002241!5.75e-09!1;UBERON:0001703!5.75e-09!1;UBERON:0004761!5.75e-09!1;UBERON:0009617!5.75e-09!1;UBERON:0003056!8.84e-09!61;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0001017!1.40e-07!82;UBERON:0007023!1.65e-07!115;UBERON:0003075!2.90e-07!86;UBERON:0007284!2.90e-07!86;UBERON:0005743!3.66e-07!86;UBERON:0002021!3.80e-07!5;UBERON:0000349!5.15e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.39e-66;3!UBERON:0007616;2.39e-66;3!UBERON:0002217;2.39e-66;3!UBERON:0002018;2.39e-66;3!UBERON:0004905;5.22e-26;8!UBERON:0000982;5.22e-26;8!UBERON:0004770;5.22e-26;8!UBERON:0004457;2.62e-23;9!UBERON:0000042;2.62e-23;9!UBERON:0000486;6.76e-18;12!UBERON:0006914;2.15e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.39e-66,3;UBERON:0007616,2.39e-66,3;UBERON:0002217,2.39e-66,3;UBERON:0002018,2.39e-66,3;UBERON:0004905,5.22e-26,8;UBERON:0000982,5.22e-26,8;UBERON:0004770,5.22e-26,8;UBERON:0004457,6.76e-18,12;UBERON:0000042,6.76e-18,12;UBERON:0006914,2.15e-09,25 | |||
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|short_description=p@chr2:181751144..181751146,+ | |short_description=p@chr2:181751144..181751146,+ | ||
}} | }} |
Latest revision as of 03:55, 29 July 2015
Short description: | p@chr2:181751144..181751146, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:181751144..181751146, + |
Coexpression cluster: | C321_synovial_anaplastic_maxillary_glassy_keratoacanthoma_rhabdomyosarcoma_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 2.39e-66 | 3 |
GAG secreting cell | 2.62e-23 | 9 |
carbohydrate secreting cell | 2.62e-23 | 9 |
extracellular matrix secreting cell | 1.22e-14 | 15 |
stromal cell | 1.52e-08 | 28 |
secretory cell | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.39e-66 | 3 |
layer of synovial tissue | 2.39e-66 | 3 |
synovial joint | 2.39e-66 | 3 |
synovial membrane of synovial joint | 2.39e-66 | 3 |
articulation | 5.22e-26 | 8 |
skeletal joint | 5.22e-26 | 8 |
articular system | 5.22e-26 | 8 |
cavity lining | 6.76e-18 | 12 |
serous membrane | 6.76e-18 | 12 |
squamous epithelium | 2.15e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 2.29e-11 | 20 |