FFCP PHASE1:Hg19::chr2:202123066..202123088,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:202123066..202123088,- | |||
|coexpression_cluster_id=C871 | |||
|description=CAGE_peak_at_chr2:202123066..202123088,- | |description=CAGE_peak_at_chr2:202123066..202123088,- | ||
|id=chr2:202123066..202123088,- | |id=chr2:202123066..202123088,- | ||
|ontology_enrichment_celltype=CL:0000542!2.37e-39!53;CL:0000051!2.37e-39!53;CL:0000838!1.95e-38!52;CL:0000037!1.64e-34!172;CL:0000566!1.64e-34!172;CL:0000738!4.85e-34!140;CL:0000988!7.22e-33!182;CL:0002032!1.53e-30!165;CL:0000837!1.53e-30!165;CL:0002087!5.11e-27!119;CL:0002031!2.00e-26!124;CL:0000084!9.70e-19!25;CL:0000827!9.70e-19!25;CL:0000791!3.63e-17!18;CL:0000789!3.63e-17!18;CL:0002420!3.63e-17!18;CL:0002419!3.63e-17!18;CL:0000790!3.63e-17!18;CL:0000945!5.19e-17!24;CL:0000826!5.19e-17!24;CL:0000236!3.40e-14!14;CL:0002320!8.74e-11!365;CL:0000134!1.11e-10!358;CL:0002393!2.62e-10!9;CL:0002397!2.62e-10!9;CL:0000625!4.25e-10!11;CL:0000219!2.24e-08!390;CL:0000624!2.29e-08!6 | |ontology_enrichment_celltype=CL:0000542!2.37e-39!53;CL:0000051!2.37e-39!53;CL:0000838!1.95e-38!52;CL:0000037!1.64e-34!172;CL:0000566!1.64e-34!172;CL:0000738!4.85e-34!140;CL:0000988!7.22e-33!182;CL:0002032!1.53e-30!165;CL:0000837!1.53e-30!165;CL:0002087!5.11e-27!119;CL:0002031!2.00e-26!124;CL:0000084!9.70e-19!25;CL:0000827!9.70e-19!25;CL:0000791!3.63e-17!18;CL:0000789!3.63e-17!18;CL:0002420!3.63e-17!18;CL:0002419!3.63e-17!18;CL:0000790!3.63e-17!18;CL:0000945!5.19e-17!24;CL:0000826!5.19e-17!24;CL:0000236!3.40e-14!14;CL:0002320!8.74e-11!365;CL:0000134!1.11e-10!358;CL:0002393!2.62e-10!9;CL:0002397!2.62e-10!9;CL:0000625!4.25e-10!11;CL:0000219!2.24e-08!390;CL:0000624!2.29e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.94e-22;13!CL:0000791;6.58e-21;18!CL:0000789;6.58e-21;18!CL:0002419;6.58e-21;18!CL:0000542;2.93e-20;53!CL:0000624;2.02e-17;6!CL:0000084;8.50e-17;25!CL:0000945;8.80e-11;24!CL:0000623;1.16e-10;3!CL:0000898;2.09e-09;3!CL:0000625;5.51e-09;11!CL:0000784;6.52e-09;3!CL:0000815;5.49e-07;2!CL:0000792;5.49e-07;2!CL:0002677;5.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.08e-32,52;CL:0000542,6.11e-32,53;CL:0000051,6.11e-32,53;CL:0000738,5.36e-28,136;CL:0000037,1.38e-24,168;CL:0000988,9.07e-23,177;CL:0000791,3.12e-21,18;CL:0000789,3.12e-21,18;CL:0002420,3.12e-21,18;CL:0002419,3.12e-21,18;CL:0000790,3.12e-21,18;CL:0002031,3.68e-21,120;CL:0002032,1.09e-20,161;CL:0000837,1.09e-20,161;CL:0000236,2.50e-20,14;CL:0002087,1.92e-19,115;CL:0000624,9.61e-18,6;CL:0000084,5.87e-17,25;CL:0000827,5.87e-17,25;CL:0000945,5.97e-11,24;CL:0000826,5.97e-11,24;CL:0000623,1.24e-10,3;CL:0000825,1.24e-10,3;CL:0000898,1.47e-09,3;CL:0000625,4.45e-09,11;CL:0000784,6.64e-09,3;CL:0000815,4.52e-07,2;CL:0000792,4.52e-07,2;CL:0002677,4.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.58e-21;18!CL:0000051;2.93e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.54e-11!375;UBERON:0002390!1.58e-07!102;UBERON:0003061!1.58e-07!102;UBERON:0000178!2.27e-07!15;UBERON:0000179!2.27e-07!15;UBERON:0000463!2.27e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:202123066..202123088,- | |short_description=p@chr2:202123066..202123088,- | ||
}} | }} |
Latest revision as of 05:03, 29 July 2015
Short description: | p@chr2:202123066..202123088, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:202123066..202123088, - |
Coexpression cluster: | C871_CD19_Mast_CD4_CD8_Natural_Peripheral_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.08e-32 | 52 |
lymphocyte | 6.11e-32 | 53 |
common lymphoid progenitor | 6.11e-32 | 53 |
leukocyte | 5.36e-28 | 136 |
hematopoietic stem cell | 1.38e-24 | 168 |
hematopoietic cell | 9.07e-23 | 177 |
mature alpha-beta T cell | 3.12e-21 | 18 |
alpha-beta T cell | 3.12e-21 | 18 |
immature T cell | 3.12e-21 | 18 |
mature T cell | 3.12e-21 | 18 |
immature alpha-beta T cell | 3.12e-21 | 18 |
hematopoietic lineage restricted progenitor cell | 3.68e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.09e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-20 | 161 |
B cell | 2.50e-20 | 14 |
nongranular leukocyte | 1.92e-19 | 115 |
CD4-positive, alpha-beta T cell | 9.61e-18 | 6 |
T cell | 5.87e-17 | 25 |
pro-T cell | 5.87e-17 | 25 |
lymphocyte of B lineage | 5.97e-11 | 24 |
pro-B cell | 5.97e-11 | 24 |
natural killer cell | 1.24e-10 | 3 |
pro-NK cell | 1.24e-10 | 3 |
naive T cell | 1.47e-09 | 3 |
CD8-positive, alpha-beta T cell | 4.45e-09 | 11 |
plasmacytoid dendritic cell | 6.64e-09 | 3 |
regulatory T cell | 4.52e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.52e-07 | 2 |
naive regulatory T cell | 4.52e-07 | 2 |