FFCP PHASE1:Hg19::chr2:202123066..202123088,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:202123066..202123088,-
|short_description=p@chr2:202123066..202123088,-
|description=CAGE_peak_at_chr2:202123066..202123088,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:202123066..202123088,- | |||
|coexpression_cluster_id=C871 | |||
|description=CAGE_peak_at_chr2:202123066..202123088,- | |||
|id=chr2:202123066..202123088,- | |||
|ontology_enrichment_celltype=CL:0000542!2.37e-39!53;CL:0000051!2.37e-39!53;CL:0000838!1.95e-38!52;CL:0000037!1.64e-34!172;CL:0000566!1.64e-34!172;CL:0000738!4.85e-34!140;CL:0000988!7.22e-33!182;CL:0002032!1.53e-30!165;CL:0000837!1.53e-30!165;CL:0002087!5.11e-27!119;CL:0002031!2.00e-26!124;CL:0000084!9.70e-19!25;CL:0000827!9.70e-19!25;CL:0000791!3.63e-17!18;CL:0000789!3.63e-17!18;CL:0002420!3.63e-17!18;CL:0002419!3.63e-17!18;CL:0000790!3.63e-17!18;CL:0000945!5.19e-17!24;CL:0000826!5.19e-17!24;CL:0000236!3.40e-14!14;CL:0002320!8.74e-11!365;CL:0000134!1.11e-10!358;CL:0002393!2.62e-10!9;CL:0002397!2.62e-10!9;CL:0000625!4.25e-10!11;CL:0000219!2.24e-08!390;CL:0000624!2.29e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.94e-22;13!CL:0000791;6.58e-21;18!CL:0000789;6.58e-21;18!CL:0002419;6.58e-21;18!CL:0000542;2.93e-20;53!CL:0000624;2.02e-17;6!CL:0000084;8.50e-17;25!CL:0000945;8.80e-11;24!CL:0000623;1.16e-10;3!CL:0000898;2.09e-09;3!CL:0000625;5.51e-09;11!CL:0000784;6.52e-09;3!CL:0000815;5.49e-07;2!CL:0000792;5.49e-07;2!CL:0002677;5.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.08e-32,52;CL:0000542,6.11e-32,53;CL:0000051,6.11e-32,53;CL:0000738,5.36e-28,136;CL:0000037,1.38e-24,168;CL:0000988,9.07e-23,177;CL:0000791,3.12e-21,18;CL:0000789,3.12e-21,18;CL:0002420,3.12e-21,18;CL:0002419,3.12e-21,18;CL:0000790,3.12e-21,18;CL:0002031,3.68e-21,120;CL:0002032,1.09e-20,161;CL:0000837,1.09e-20,161;CL:0000236,2.50e-20,14;CL:0002087,1.92e-19,115;CL:0000624,9.61e-18,6;CL:0000084,5.87e-17,25;CL:0000827,5.87e-17,25;CL:0000945,5.97e-11,24;CL:0000826,5.97e-11,24;CL:0000623,1.24e-10,3;CL:0000825,1.24e-10,3;CL:0000898,1.47e-09,3;CL:0000625,4.45e-09,11;CL:0000784,6.64e-09,3;CL:0000815,4.52e-07,2;CL:0000792,4.52e-07,2;CL:0002677,4.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;6.58e-21;18!CL:0000051;2.93e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.54e-11!375;UBERON:0002390!1.58e-07!102;UBERON:0003061!1.58e-07!102;UBERON:0000178!2.27e-07!15;UBERON:0000179!2.27e-07!15;UBERON:0000463!2.27e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0.0787107813136792,4.32700704533794,2.68680578668049,0.77408061658038,0,0,0,0.852139206383318,0.426507697462265,2.05520307534393,2.21598163412751,0.401088894940283,1.51907609501096,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0.845021145247767,0.637812899895131,0.838634582033504,0.561643155732475,0.300353785683013,0,1.71007646244749,0.79566670879636,2.00930569141097,1.75996244461323,3.82297027883492,0.889509253863555,4.26730222566507,1.60158394814405,2.29900975981793,3.30522436392431,1.90810750907073,6.83055562931338,2.34894875748376,2.6759125968766,3.96513985737078,1.12101712596307,1.05353633910031,1.96709770113833,3.93010762749165,2.05601498999509,1.00311897234407,1.62961133316795,2.8406868344084,7.79306913631645,2.78526142212934,3.53527088969805,3.1014745241707,8.12411591295047,1.0247305578054,3.77172107923647,0.328875809207352,1.10540007114339,0.579606171470105,2.37258501059297,2.94294910898684,3.1360657141493,1.13309342697566,1.53288197440768,5.15441168223945,3.79529538029254,0.318565414324097,0.651083453856419,0.950452044448374,1.80690142893327,0.383959833463255,1.24930726552346,1.65744076430812,0,2.01606743224732,2.13952156626806,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0,1.19245312152671,1.71598473234038,1.11437250398869,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,0,0,0,0.397227542439656,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,1.24396869324463,2.01767934783746,2.27236380167484,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,4.13764596424047,4.9594342217689,3.46526197955321,0,0,0,0,0,0,0,2.48649308061621,0.12269149171914,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.50999940573032,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,2.27858874869665,0.476463550915578,0,1.29694662238543,0.540031437238115,0,0,0,0,0.557409525377156,0.28853842595289,0.497992903438899,0.318852545457645,0,0,0.211673582723883,0.324621940274555,1.12318871245384,0,0.313359791546046,0,0,0.321176150207399,0,0,0,0,0.447352215784832,1.50164227540718,0.586164286206121,0,0,0.270455678475983,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0.197286811273867,4.7896618469388,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0,0,0.296521128680622,0,0,0,0.802577647298789,0,0.547364367646998,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0.13480708770837,0.196854963029498,0.423366660328922,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,1.02520268501629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr2:202123066..202123088,- | |||
}} | }} |
Latest revision as of 05:03, 29 July 2015
Short description: | p@chr2:202123066..202123088, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:202123066..202123088, - |
Coexpression cluster: | C871_CD19_Mast_CD4_CD8_Natural_Peripheral_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.08e-32 | 52 |
lymphocyte | 6.11e-32 | 53 |
common lymphoid progenitor | 6.11e-32 | 53 |
leukocyte | 5.36e-28 | 136 |
hematopoietic stem cell | 1.38e-24 | 168 |
hematopoietic cell | 9.07e-23 | 177 |
mature alpha-beta T cell | 3.12e-21 | 18 |
alpha-beta T cell | 3.12e-21 | 18 |
immature T cell | 3.12e-21 | 18 |
mature T cell | 3.12e-21 | 18 |
immature alpha-beta T cell | 3.12e-21 | 18 |
hematopoietic lineage restricted progenitor cell | 3.68e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.09e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-20 | 161 |
B cell | 2.50e-20 | 14 |
nongranular leukocyte | 1.92e-19 | 115 |
CD4-positive, alpha-beta T cell | 9.61e-18 | 6 |
T cell | 5.87e-17 | 25 |
pro-T cell | 5.87e-17 | 25 |
lymphocyte of B lineage | 5.97e-11 | 24 |
pro-B cell | 5.97e-11 | 24 |
natural killer cell | 1.24e-10 | 3 |
pro-NK cell | 1.24e-10 | 3 |
naive T cell | 1.47e-09 | 3 |
CD8-positive, alpha-beta T cell | 4.45e-09 | 11 |
plasmacytoid dendritic cell | 6.64e-09 | 3 |
regulatory T cell | 4.52e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.52e-07 | 2 |
naive regulatory T cell | 4.52e-07 | 2 |