FFCP PHASE1:Hg19::chr2:216271209..216271220,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:216271209..216271220,- to FFCP PHASE1:Hg19::chr2:216271209..216271220,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:216271209..216271220,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr2:216271209..216271220,- | |||
|id=chr2:216271209..216271220,- | |||
|ontology_enrichment_celltype=CL:0000055!2.90e-26!180;CL:0000057!1.52e-24!75;CL:0002371!2.64e-13!591;CL:0000723!3.04e-11!436;CL:0000048!3.52e-11!430;CL:0000144!4.09e-11!625;CL:0002620!4.24e-11!23;CL:0000034!8.90e-11!444;CL:0000680!5.29e-10!57;CL:0000056!5.29e-10!57;CL:0000355!5.29e-10!57;CL:0000183!1.31e-09!59;CL:0000187!8.60e-09!54;CL:0000548!5.54e-08!679;CL:0000004!5.54e-08!679;CL:0000255!5.54e-08!679;CL:0000012!1.14e-07!682;CL:0002334!1.27e-07!12;CL:0000393!2.35e-07!60;CL:0000211!2.35e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002580;4.29e-08;3!CL:0000349;4.44e-08;19!CL:0002541;4.93e-08;3!CL:0000057;2.79e-07;73!CL:0002615;7.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.20e-15,76;CL:0002541,2.52e-08,3;CL:0002580,3.27e-08,3;CL:0000349,4.24e-08,19;CL:0002334,8.95e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.85e-07;5!DOID:450;3.85e-07;5!DOID:66;3.85e-07;5!DOID:423;3.85e-07;5!DOID:0080000;3.85e-07;5!DOID:11722;3.85e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.51e-07,5;DOID:450,3.51e-07,5;DOID:66,3.51e-07,5;DOID:423,3.51e-07,5;DOID:0080000,3.51e-07,5;DOID:11722,3.51e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.50e-10!83;UBERON:0002329!1.50e-10!83;UBERON:0003077!1.50e-10!83;UBERON:0003059!1.50e-10!83;UBERON:0007282!1.50e-10!83;UBERON:0009618!1.50e-10!83;UBERON:0007285!1.50e-10!83;UBERON:0003102!2.47e-10!95;UBERON:0002199!3.68e-09!45;UBERON:0002416!3.68e-09!45;UBERON:0004290!4.78e-09!70;UBERON:0001134!1.39e-08!61;UBERON:0002036!1.39e-08!61;UBERON:0003082!1.39e-08!61;UBERON:0002385!1.40e-08!63;UBERON:0001015!1.40e-08!63;UBERON:0000383!1.40e-08!63;UBERON:0002097!3.07e-08!40;UBERON:0005256!5.65e-08!143;UBERON:0005631!1.76e-07!14;UBERON:0000158!1.76e-07!14;UBERON:0000486!2.03e-07!82;UBERON:0004872!5.98e-07!84;UBERON:0004923!7.88e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.05e-10;10!UBERON:0000158;2.05e-10;10!UBERON:0003688;2.44e-09;6!UBERON:0002358;2.44e-09;6!UBERON:0003684;2.44e-09;6!UBERON:0001178;2.44e-09;6!UBERON:0003124;4.93e-08;3!UBERON:0000920;4.93e-08;3!UBERON:0000478;2.09e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.95e-09,14;UBERON:0000158,3.95e-09,14;UBERON:0003688,4.29e-09,6;UBERON:0002358,4.29e-09,6;UBERON:0003684,4.29e-09,6;UBERON:0001178,4.29e-09,6;UBERON:0000920,2.52e-08,3;UBERON:0000478,2.24e-07,24;UBERON:0002384,7.90e-07,371 | |||
|phase1_expression=2.36181893051724,1.92690471501885,1.26858963686374,1.0007329835313,1.34088328328186,4.36169262050184,0,0.631719873426831,0.261185628199839,0.245733936501509,0,1.09220686065086,1.31883489114227,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.2786256184353,0.722878304769133,1.00267582127178,0.289693037921647,18.2915767821753,13.1391414981712,0,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,1.13061588384802,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0,0,0.81014194788176,0,0,0.225222960966644,0,0,0,0,0,0,8.94549513051573,1.13967460498122,2.25095607382472,2.86836620748814,0.354668382198357,0,1.06748995729705,0.98667019366864,1.24484414159907,0.942974704487816,0.980771418680752,1.36221684880438,1.15235184896,0,0.936480230490962,0,0.747243402759005,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0.619954687054593,0,2.22540236350701,0.910161361938026,0,0.673344455816265,0.250237039743928,0.554128230968366,1.31693286264251,1.22595118319608,1.65261864797256,0.340296549480063,1.79389635688862,1.2813443329114,2.7551147150743,0.600182192168805,1.13357782162283,1.8034837803194,0.744467425326359,3.03797398034279,0.68205903612839,0.757301322732344,0.828449087780694,1.13152239773168,2.84007674013291,0.906768884048762,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.92972281457866,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0.939269553886573,0.577465791044295,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,1.07470227243418,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0.771622122786426,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,1.19812427745791,2.29723871668228,1.42636905040718,0.723906533337896,1.2328579353023,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,2.50085260529839,0,3.95144636908534,3.56857977594324,1.10391690523754,1.05427273493442,0.601892199455438,0,0,0.664225598535437,0.737476674166813,0.260650843404249,0.587403472388222,0.343143423810856,0,0,0,0.303127571446259,0,0.907170879989041,2.97729369382532,2.91577749247319,4.49056151092918,0.640695746278505,4.60536524160033,4.3430558708774,1.48418066444991,0.308419387605311,0.710246901252508,0.410635780069046,0,0.464841513839837,0.241718899183244,0.601519410909855,0,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0.462145851343933,0.921022048356777,0.827019434907183,0.429680979473094,1.74020032697074,0.426133137080504,1.15741646340759,0.495854746082934,2.11409074101617,0.638063562472921,1.2138933702666,0.464845549297286,0.62962469366128,0.6970372701606,0,1.06461206063404,0,0.37064843820784,0.286249773483982,0.372158369359667,0.949138274156178,0.190630193923825,0,0.855877976067841,0.318203247925937,0.78494864019923,0,0,0.706874414074119,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.707027159768564,1.13008116620243,0,0,0,0,1.31178950409327,0.608731130888112,0,0.281695602532241,0.143411352204052,0.491245205065606,0.7133421029625,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,0.593929361665277,1.53580351049616,0,0,1.8922479853894,0,0,0.597743964753209,0,0,0,0,6.53183134089796,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,1.13942055847001,0,0,0,23.925086979894,1.92354946143911,79.4221816267766,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,1.19472429772959,0.569219092059585,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,1.71906176567983,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,5.04419836959365,0,0.157566364614447,0.412079291905832,0.26961417541674,0.0984274815147488,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0.537862017998534,0,0,0,0,1.08599920350743,0,1.30634944043764,0,0,1.02232813071253,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,1.49254802886874,1.63599316893057,1.66441758450784,0.757612021100357,1.76097531226803,1.77962244319307,0.915360273587694,0.756154618816195,0.7771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| ||
|short_description=p@chr2:216271209..216271220,- | |||
}} | }} |
Latest revision as of 06:10, 29 July 2015
Short description: | p@chr2:216271209..216271220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216271209..216271220, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.20e-15 | 76 |
chorionic membrane mesenchymal stem cell | 2.52e-08 | 3 |
preadipocyte of the breast | 3.27e-08 | 3 |
extraembryonic cell | 4.24e-08 | 19 |
preadipocyte | 8.95e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.95e-09 | 14 |
membranous layer | 3.95e-09 | 14 |
omentum | 4.29e-09 | 6 |
peritoneum | 4.29e-09 | 6 |
abdominal cavity | 4.29e-09 | 6 |
visceral peritoneum | 4.29e-09 | 6 |
egg chorion | 2.52e-08 | 3 |
extraembryonic structure | 2.24e-07 | 24 |
connective tissue | 7.90e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.51e-07 | 5 |
myotonic disease | 3.51e-07 | 5 |
muscle tissue disease | 3.51e-07 | 5 |
myopathy | 3.51e-07 | 5 |
muscular disease | 3.51e-07 | 5 |
myotonic dystrophy | 3.51e-07 | 5 |