FFCP PHASE1:Hg19::chr2:218193183..218193196,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:218193183..218193196,- | |||
|coexpression_cluster_id=C1250 | |coexpression_cluster_id=C1250 | ||
|description=CAGE_peak_at_chr2:218193183..218193196,- | |description=CAGE_peak_at_chr2:218193183..218193196,- | ||
|id=chr2:218193183..218193196,- | |id=chr2:218193183..218193196,- | ||
|ontology_enrichment_celltype=CL:0002537;6.34e-08;5!CL:0000349;6.36e-08;19!CL:0000197;7.58e-07;6!CL:0000098;7.58e-07;6!CL:0002167;7.58e-07;6!CL:0002569;9.23e-07;6 | |ontology_enrichment_celltype=CL:0000197!3.79e-14!6;CL:0000098!3.79e-14!6;CL:0002167!3.79e-14!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002537;6.34e-08;5!CL:0000349;6.36e-08;19!CL:0000197;7.58e-07;6!CL:0000098;7.58e-07;6!CL:0002167;7.58e-07;6!CL:0002569;9.23e-07;6 | ||
|ontology_enrichment_disease=DOID:0060084;1.09e-44;3!DOID:127;1.09e-44;3!DOID:0060072;7.69e-34;4 | |ontology_enrichment_celltype_v019_2=CL:0002537,6.13e-08,5;CL:0000349,6.36e-08,19;CL:0000197,7.58e-07,6;CL:0000098,7.58e-07,6;CL:0002167,7.58e-07,6;CL:0002569,9.49e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0000995;8.72e-09;17!UBERON:0003975;2.38e-08;18!UBERON:0004175;2.73e-07;21!UBERON:0003422;9.23e-07;6 | |ontology_enrichment_development_v019=UBERON:0005795;3.14e-14;10 | ||
|ontology_enrichment_disease=DOID:0060084!7.18e-17!3;DOID:127!7.18e-17!3;DOID:0060072!8.93e-13!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.09e-44;3!DOID:127;1.09e-44;3!DOID:0060072;7.69e-34;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.77e-45,3;DOID:127,9.77e-45,3;DOID:0060072,7.07e-34,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;8.72e-09;17!UBERON:0003975;2.38e-08;18!UBERON:0004175;2.73e-07;21!UBERON:0003422;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,2.69e-07,21;UBERON:0005795,5.24e-07,22;UBERON:0003975,5.24e-07,22;UBERON:0003422,9.49e-07,6 | |||
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|short_description=p@chr2:218193183..218193196,- | |short_description=p@chr2:218193183..218193196,- | ||
}} | }} |
Latest revision as of 06:29, 29 July 2015
Short description: | p@chr2:218193183..218193196, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:218193183..218193196, - |
Coexpression cluster: | C1250_leiomyoma_Mesenchymal_Olfactory_amygdala_carcinoid_fibrosarcoma_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 6.13e-08 | 5 |
extraembryonic cell | 6.36e-08 | 19 |
receptor cell | 7.58e-07 | 6 |
sensory epithelial cell | 7.58e-07 | 6 |
olfactory epithelial cell | 7.58e-07 | 6 |
mesenchymal stem cell of umbilical cord | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
uterus | 2.69e-07 | 21 |
embryonic uterus | 5.24e-07 | 22 |
internal female genitalia | 5.24e-07 | 22 |
mesenchyme of umbilical cord | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.77e-45 | 3 |
leiomyoma | 9.77e-45 | 3 |
benign neoplasm | 7.07e-34 | 4 |