FFCP PHASE1:Hg19::chr2:233103160..233103171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:233103160..233103171,+ | |||
|coexpression_cluster_id=C649 | |||
|description=CAGE_peak_at_chr2:233103160..233103171,+ | |description=CAGE_peak_at_chr2:233103160..233103171,+ | ||
|id=chr2:233103160..233103171,+ | |id=chr2:233103160..233103171,+ | ||
|ontology_enrichment_celltype=CL:1000415!1.01e-12!2 | |ontology_enrichment_celltype=CL:1000415!1.01e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.31e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.97e-34;1 | |||
|ontology_enrichment_disease=DOID:630!1.18e-07!1;DOID:0050177!1.18e-07!1;DOID:0050427!1.18e-07!1 | |ontology_enrichment_disease=DOID:630!1.18e-07!1;DOID:0050177!1.18e-07!1;DOID:0050427!1.18e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002294!6.65e-21!7;UBERON:0001173!6.65e-21!7;UBERON:0004912!6.65e-21!7;UBERON:0002394!6.49e-14!4;UBERON:0003928!6.49e-14!4;UBERON:0001042!2.51e-10!10;UBERON:0009145!2.51e-10!10;UBERON:0000077!6.14e-10!130;UBERON:0006562!2.14e-09!11;UBERON:0004119!6.32e-09!169;UBERON:0000925!6.32e-09!169;UBERON:0006595!6.32e-09!169;UBERON:0002110!8.92e-09!3;UBERON:0006242!8.92e-09!3;UBERON:0001041!6.09e-08!98;UBERON:0002372!6.59e-08!1;UBERON:0001961!6.59e-08!1;UBERON:0001744!6.59e-08!1;UBERON:0001735!6.59e-08!1;UBERON:0000065!6.79e-08!53;UBERON:0002135!1.42e-07!1;UBERON:0000072!2.26e-07!46;UBERON:0004913!2.35e-07!1;UBERON:0003703!2.35e-07!1;UBERON:0001174!2.35e-07!1;UBERON:0004914!2.35e-07!1;UBERON:0001043!3.31e-07!4;UBERON:0009143!3.31e-07!4;UBERON:0002370!4.10e-07!4;UBERON:0005058!4.10e-07!4;UBERON:0009113!4.10e-07!4;UBERON:0003295!4.10e-07!4;UBERON:0005562!4.10e-07!4;UBERON:0005911!7.88e-07!82 | |ontology_enrichment_uberon=UBERON:0002294!6.65e-21!7;UBERON:0001173!6.65e-21!7;UBERON:0004912!6.65e-21!7;UBERON:0002394!6.49e-14!4;UBERON:0003928!6.49e-14!4;UBERON:0001042!2.51e-10!10;UBERON:0009145!2.51e-10!10;UBERON:0000077!6.14e-10!130;UBERON:0006562!2.14e-09!11;UBERON:0004119!6.32e-09!169;UBERON:0000925!6.32e-09!169;UBERON:0006595!6.32e-09!169;UBERON:0002110!8.92e-09!3;UBERON:0006242!8.92e-09!3;UBERON:0001041!6.09e-08!98;UBERON:0002372!6.59e-08!1;UBERON:0001961!6.59e-08!1;UBERON:0001744!6.59e-08!1;UBERON:0001735!6.59e-08!1;UBERON:0000065!6.79e-08!53;UBERON:0002135!1.42e-07!1;UBERON:0000072!2.26e-07!46;UBERON:0004913!2.35e-07!1;UBERON:0003703!2.35e-07!1;UBERON:0001174!2.35e-07!1;UBERON:0004914!2.35e-07!1;UBERON:0001043!3.31e-07!4;UBERON:0009143!3.31e-07!4;UBERON:0002370!4.10e-07!4;UBERON:0005058!4.10e-07!4;UBERON:0009113!4.10e-07!4;UBERON:0003295!4.10e-07!4;UBERON:0005562!4.10e-07!4;UBERON:0005911!7.88e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.84e-34;1!UBERON:0001961;1.84e-34;1!UBERON:0001744;1.84e-34;1!UBERON:0001042;1.84e-34;1!UBERON:0001735;1.84e-34;1!UBERON:0006562;5.48e-18;2!UBERON:0000341;9.86e-18;2!UBERON:0001043;2.74e-12;3!UBERON:0001723;2.74e-12;3!UBERON:0003124;2.74e-12;3!UBERON:0000920;2.74e-12;3!UBERON:0001033;2.74e-12;3!UBERON:0000974;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.84e-34,1;UBERON:0001961,1.84e-34,1;UBERON:0001744,1.84e-34,1;UBERON:0001735,1.84e-34,1;UBERON:0000341,9.07e-18,2;UBERON:0001042,3.25e-14,10;UBERON:0009145,3.25e-14,10;UBERON:0006562,5.10e-13,11;UBERON:0000920,2.31e-12,3;UBERON:0001043,2.89e-12,3;UBERON:0009143,2.89e-12,3;UBERON:0001723,3.24e-12,3;UBERON:0001033,3.24e-12,3;UBERON:0010056,3.24e-12,3;UBERON:0001557,5.94e-08,19;UBERON:0000166,5.40e-07,22 | |||
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|short_description=p@chr2:233103160..233103171,+ | |short_description=p@chr2:233103160..233103171,+ | ||
}} | }} |
Latest revision as of 07:45, 29 July 2015
Short description: | p@chr2:233103160..233103171, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:233103160..233103171, + |
Coexpression cluster: | C649_tonsil_esophagus_tongue_throat_trachea_cervical_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.84e-34 | 1 |
mucosa-associated lymphoid tissue | 1.84e-34 | 1 |
lymphoid tissue | 1.84e-34 | 1 |
tonsillar ring | 1.84e-34 | 1 |
throat | 9.07e-18 | 2 |
chordate pharynx | 3.25e-14 | 10 |
pharyngeal region of foregut | 3.25e-14 | 10 |
pharynx | 5.10e-13 | 11 |
egg chorion | 2.31e-12 | 3 |
esophagus | 2.89e-12 | 3 |
esophageal region | 2.89e-12 | 3 |
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |
upper respiratory tract | 5.94e-08 | 19 |
oral opening | 5.40e-07 | 22 |