FFCP PHASE1:Hg19::chr2:238233169..238233193,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238233169..238233193,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238233169..238233193,- | |description=CAGE_peak_at_chr2:238233169..238233193,- | ||
|id=chr2:238233169..238233193,- | |id=chr2:238233169..238233193,- | ||
|ontology_enrichment_celltype=CL:0000055!2.89e-32!180;CL:0000057!2.22e-26!75;CL:0002620!1.23e-14!23;CL:0000680!1.23e-11!57;CL:0000056!1.23e-11!57;CL:0000355!1.23e-11!57;CL:0000187!2.36e-11!54;CL:0000183!3.68e-11!59;CL:0000048!6.56e-11!430;CL:0000723!3.62e-10!436;CL:0000034!3.15e-09!444;CL:0000393!4.74e-09!60;CL:0000211!4.74e-09!60;CL:0002570!3.78e-07!8 | |ontology_enrichment_celltype=CL:0000055!2.89e-32!180;CL:0000057!2.22e-26!75;CL:0002620!1.23e-14!23;CL:0000680!1.23e-11!57;CL:0000056!1.23e-11!57;CL:0000355!1.23e-11!57;CL:0000187!2.36e-11!54;CL:0000183!3.68e-11!59;CL:0000048!6.56e-11!430;CL:0000723!3.62e-10!436;CL:0000034!3.15e-09!444;CL:0000393!4.74e-09!60;CL:0000211!4.74e-09!60;CL:0002570!3.78e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.64e-09;23!CL:0002570;5.09e-08;8!CL:0000057;6.89e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.67e-16,76;CL:0000680,1.96e-09,58;CL:0000056,1.96e-09,58;CL:0000355,1.96e-09,58;CL:0000187,2.67e-09,55;CL:0000048,3.45e-09,427;CL:0002620,5.92e-09,23;CL:0000723,8.73e-09,433;CL:0000034,2.87e-08,441;CL:0002570,2.95e-08,8;CL:0000393,7.42e-08,61;CL:0000211,7.42e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.52e-17!83;UBERON:0002329!2.52e-17!83;UBERON:0003077!2.52e-17!83;UBERON:0003059!2.52e-17!83;UBERON:0007282!2.52e-17!83;UBERON:0009618!2.52e-17!83;UBERON:0007285!2.52e-17!83;UBERON:0004290!1.11e-15!70;UBERON:0002385!5.48e-13!63;UBERON:0001015!5.48e-13!63;UBERON:0000383!5.48e-13!63;UBERON:0001134!1.50e-12!61;UBERON:0002036!1.50e-12!61;UBERON:0003082!1.50e-12!61;UBERON:0000486!1.56e-12!82;UBERON:0002199!1.93e-11!45;UBERON:0002416!1.93e-11!45;UBERON:0005256!2.79e-11!143;UBERON:0003102!4.91e-11!95;UBERON:0002097!9.28e-11!40;UBERON:0002100!6.05e-08!216;UBERON:0000475!3.66e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.05e-09;31!UBERON:0001015;6.05e-09;31!UBERON:0000383;6.05e-09;31!UBERON:0002097;1.82e-07;41!UBERON:0002199;3.63e-07;46!UBERON:0002416;3.63e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.68e-12,73;UBERON:0002329,2.73e-11,71;UBERON:0003059,2.73e-11,71;UBERON:0007282,2.73e-11,71;UBERON:0004290,2.73e-11,71;UBERON:0009618,2.73e-11,71;UBERON:0003077,4.94e-11,72;UBERON:0007285,4.94e-11,72;UBERON:0001134,1.71e-10,62;UBERON:0002036,1.71e-10,62;UBERON:0003082,1.71e-10,62;UBERON:0002385,5.75e-10,64;UBERON:0001015,5.75e-10,64;UBERON:0000383,5.75e-10,64;UBERON:0007503,1.23e-09,78;UBERON:0002199,2.14e-09,46;UBERON:0002416,2.14e-09,46;UBERON:0005256,7.89e-09,122;UBERON:0000486,1.23e-08,83;UBERON:0003104,1.25e-08,160;UBERON:0009142,1.25e-08,160;UBERON:0002097,1.34e-08,41;UBERON:0003102,1.22e-07,99 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0.783556884599516,0.245733936501509,0,0,0.263766978228454,1.11389717664042,1.65698687863958,1.34465029290355,1.80808358407193,2.19093027116212,0.975865597581014,0,0.612002073732759,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1903433156981,2.01210257911091,0,0.361439152384566,2.00535164254356,1.30361867064741,2.3858578411533,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.264818361626438,4.58938593198102,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0,0.942974704487816,0.490385709340376,1.96764655938411,7.49028701823999,0,0.936480230490962,0.570471821544449,1.19558944441441,0.117434498643765,0.647491777472526,0.561803226808994,2.44985005505872,0.491337269247072,0.929932030581889,0,2.22540236350701,0.910161361938026,0,0.505008341862199,0.125118519871964,0,2.19488810440419,0.612975591598039,1.05166641234618,0,5.02290979928813,1.06778694409284,1.48352330811693,5.40163972951924,0.824420233907511,3.34932702059318,1.8611685633159,3.03797398034279,1.26668106709558,3.02920529092937,1.01254888506529,0.323292113637624,6.03516307278244,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,3.85944562915731,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,5.88034845542168,0,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.646358578788889,3.57656445851882,1.690605505112,0.797814349754612,1.04007436911366,0.771622122786426,1.41849132023278,0,0.57191197463259,2.71310802695722,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,1.01346914667305,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.50051156317903,0.813795071099207,1.24782516918484,0.535286966391485,0.788512075169673,2.10854546986884,1.50473049863859,0,0,1.99267679560631,0.553107505625109,0.260650843404249,0.979005787313703,2.05886054286514,0,0,0,0,0,0,0.248107807818777,0.920771839728375,0,0.256278298511402,1.53512174720011,0.321707842287215,0,1.54209693802656,2.13074070375753,0.657017248110473,3.63478100428535,1.16210378459959,0,0,0,0.918515585316854,2.00300284807389,1.96686622439136,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,3.21367859688319,0.676695028044854,1.3864375540318,1.22802939780904,0.689182862422653,1.28904293841928,1.59518363305651,0.93749290157711,0.623224249527161,0,0,0,0,0,7.55549632393536,0,0,1.06461206063404,0,0,0,1.48863347743867,0,0.190630193923825,0,22.2528273777639,0.95460974377781,0,1.07923474549989,1.64722217841633,0.706874414074119,0.202182481573316,0,0,1.46290121726877,0.243713489631284,1.05650146756755,0.409499734223957,1.69686518344455,0,0.551365343546124,0,0,1.15755106853338,1.31178950409327,0.202910376962704,0,1.40847801266121,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0.844430541190656,0.987884678879706,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0.329607748453519,0,0.19924798825107,0,0,0,0,1.55519793830904,0,0,0,0.295930216910801,0,6.66821940867821,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0.859930162358083,0,0,0,0.0969890164884194,0,0,1.37041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.917983958726896,0.577901179803038,0,0,0,0,0,0.837847203816763,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,3.24269895188163,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,1.72844298240254,2.93928624098468,0,0,0.511164065356265,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,1.64180283175561,2.33713309847224,2.77402930751307,2.08343305802598,4.52822223154635,1.77962244319307,0.457680136793847,0.907385542579434,0.621748802331122,0.443565449968902,0.796483835818512,0,0.931577741257556,2.07353103920428,5.84851772027589,2.08698024724694,0,0.380805212168795,0.813741466409323,0.727394636810238,0.214821114084977,0,0.796191777397232,0,0.686791410365586,2.02049693259551,0,0,0,0,0,1.62065732026684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6552196976928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| ||
|short_description=p@chr2:238233169..238233193,- | |short_description=p@chr2:238233169..238233193,- | ||
}} | }} |
Latest revision as of 08:09, 29 July 2015
Short description: | p@chr2:238233169..238233193, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238233169..238233193, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.67e-16 | 76 |
muscle precursor cell | 1.96e-09 | 58 |
myoblast | 1.96e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.96e-09 | 58 |
muscle cell | 2.67e-09 | 55 |
multi fate stem cell | 3.45e-09 | 427 |
skin fibroblast | 5.92e-09 | 23 |
somatic stem cell | 8.73e-09 | 433 |
stem cell | 2.87e-08 | 441 |
mesenchymal stem cell of adipose | 2.95e-08 | 8 |
electrically responsive cell | 7.42e-08 | 61 |
electrically active cell | 7.42e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 6.68e-12 | 73 |
somite | 2.73e-11 | 71 |
presomitic mesoderm | 2.73e-11 | 71 |
presumptive segmental plate | 2.73e-11 | 71 |
dermomyotome | 2.73e-11 | 71 |
trunk paraxial mesoderm | 2.73e-11 | 71 |
paraxial mesoderm | 4.94e-11 | 72 |
presumptive paraxial mesoderm | 4.94e-11 | 72 |
skeletal muscle tissue | 1.71e-10 | 62 |
striated muscle tissue | 1.71e-10 | 62 |
myotome | 1.71e-10 | 62 |
muscle tissue | 5.75e-10 | 64 |
musculature | 5.75e-10 | 64 |
musculature of body | 5.75e-10 | 64 |
epithelial vesicle | 1.23e-09 | 78 |
integument | 2.14e-09 | 46 |
integumental system | 2.14e-09 | 46 |
trunk mesenchyme | 7.89e-09 | 122 |
multilaminar epithelium | 1.23e-08 | 83 |
mesenchyme | 1.25e-08 | 160 |
entire embryonic mesenchyme | 1.25e-08 | 160 |
skin of body | 1.34e-08 | 41 |
surface structure | 1.22e-07 | 99 |