FFCP PHASE1:Hg19::chr2:238233221..238233252,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238233221..238233252,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238233221..238233252,- | |description=CAGE_peak_at_chr2:238233221..238233252,- | ||
|id=chr2:238233221..238233252,- | |id=chr2:238233221..238233252,- | ||
|ontology_enrichment_celltype=CL:0000055!3.64e-40!180;CL:0000057!8.34e-32!75;CL:0000048!8.96e-18!430;CL:0000723!1.03e-16!436;CL:0000034!2.32e-15!444;CL:0000183!1.45e-14!59;CL:0000680!7.88e-14!57;CL:0000056!7.88e-14!57;CL:0000355!7.88e-14!57;CL:0000187!1.43e-13!54;CL:0002620!4.00e-13!23;CL:0000393!1.97e-11!60;CL:0000211!1.97e-11!60;CL:0002320!8.48e-11!365;CL:0000192!5.64e-10!42;CL:0000514!5.64e-10!42;CL:0002371!8.11e-09!591;CL:0000134!1.12e-08!358;CL:0002570!9.95e-08!8;CL:0002334!1.15e-07!12;CL:0000219!1.19e-07!390;CL:0000499!6.27e-07!27 | |ontology_enrichment_celltype=CL:0000055!3.64e-40!180;CL:0000057!8.34e-32!75;CL:0000048!8.96e-18!430;CL:0000723!1.03e-16!436;CL:0000034!2.32e-15!444;CL:0000183!1.45e-14!59;CL:0000680!7.88e-14!57;CL:0000056!7.88e-14!57;CL:0000355!7.88e-14!57;CL:0000187!1.43e-13!54;CL:0002620!4.00e-13!23;CL:0000393!1.97e-11!60;CL:0000211!1.97e-11!60;CL:0002320!8.48e-11!365;CL:0000192!5.64e-10!42;CL:0000514!5.64e-10!42;CL:0002371!8.11e-09!591;CL:0000134!1.12e-08!358;CL:0002570!9.95e-08!8;CL:0002334!1.15e-07!12;CL:0000219!1.19e-07!390;CL:0000499!6.27e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.29e-13;55!CL:0002620;5.00e-13;23!CL:0000723;1.02e-12;61!CL:0000048;1.37e-11;58!CL:0000057;1.43e-11;73!CL:0002320;9.37e-10;188!CL:0002570;2.57e-09;8!CL:0000034;3.22e-09;69!CL:0002334;6.07e-08;12!CL:0000499;1.28e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.26e-29,76;CL:0000048,7.73e-22,427;CL:0000723,7.01e-21,433;CL:0000034,1.19e-19,441;CL:0002320,1.68e-15,361;CL:0002620,5.27e-13,23;CL:0000134,1.41e-12,354;CL:0000680,2.33e-11,58;CL:0000056,2.33e-11,58;CL:0000355,2.33e-11,58;CL:0000187,7.03e-11,55;CL:0000219,3.25e-10,386;CL:0002570,2.61e-09,8;CL:0000393,7.42e-09,61;CL:0000211,7.42e-09,61;CL:0002334,4.62e-08,12;CL:0000499,1.32e-07,28;CL:0000192,3.04e-07,43;CL:0000514,3.04e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.54e-07!14 | |ontology_enrichment_disease=DOID:2394!1.54e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.97e-08;14!DOID:17;7.26e-07;5!DOID:450;7.26e-07;5!DOID:66;7.26e-07;5!DOID:423;7.26e-07;5!DOID:0080000;7.26e-07;5!DOID:11722;7.26e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.27e-08,14;DOID:17,6.25e-07,5;DOID:450,6.25e-07,5;DOID:66,6.25e-07,5;DOID:423,6.25e-07,5;DOID:0080000,6.25e-07,5;DOID:11722,6.25e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.15e-17!83;UBERON:0002329!2.15e-17!83;UBERON:0003077!2.15e-17!83;UBERON:0003059!2.15e-17!83;UBERON:0007282!2.15e-17!83;UBERON:0009618!2.15e-17!83;UBERON:0007285!2.15e-17!83;UBERON:0004290!1.31e-15!70;UBERON:0002385!3.83e-14!63;UBERON:0001015!3.83e-14!63;UBERON:0000383!3.83e-14!63;UBERON:0001134!8.10e-14!61;UBERON:0002036!8.10e-14!61;UBERON:0003082!8.10e-14!61;UBERON:0003102!8.13e-13!95;UBERON:0000486!2.21e-12!82;UBERON:0002199!4.83e-12!45;UBERON:0002416!4.83e-12!45;UBERON:0002384!1.28e-11!375;UBERON:0005256!4.24e-11!143;UBERON:0001013!2.73e-09!14;UBERON:0002097!3.20e-09!40;UBERON:0002100!3.70e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!2.15e-17!83;UBERON:0002329!2.15e-17!83;UBERON:0003077!2.15e-17!83;UBERON:0003059!2.15e-17!83;UBERON:0007282!2.15e-17!83;UBERON:0009618!2.15e-17!83;UBERON:0007285!2.15e-17!83;UBERON:0004290!1.31e-15!70;UBERON:0002385!3.83e-14!63;UBERON:0001015!3.83e-14!63;UBERON:0000383!3.83e-14!63;UBERON:0001134!8.10e-14!61;UBERON:0002036!8.10e-14!61;UBERON:0003082!8.10e-14!61;UBERON:0003102!8.13e-13!95;UBERON:0000486!2.21e-12!82;UBERON:0002199!4.83e-12!45;UBERON:0002416!4.83e-12!45;UBERON:0002384!1.28e-11!375;UBERON:0005256!4.24e-11!143;UBERON:0001013!2.73e-09!14;UBERON:0002097!3.20e-09!40;UBERON:0002100!3.70e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.52e-11;14!UBERON:0002384;1.29e-10;198!UBERON:0002199;4.66e-09;46!UBERON:0002416;4.66e-09;46!UBERON:0002204;5.42e-09;70!UBERON:0002385;1.16e-08;31!UBERON:0001015;1.16e-08;31!UBERON:0000383;1.16e-08;31!UBERON:0002097;1.30e-07;41!UBERON:0003102;3.31e-07;50!UBERON:0001134;8.12e-07;16!UBERON:0002036;8.12e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.20e-16,371;UBERON:0007524,4.07e-13,73;UBERON:0002199,6.85e-13,46;UBERON:0002416,6.85e-13,46;UBERON:0002329,7.71e-13,71;UBERON:0003059,7.71e-13,71;UBERON:0007282,7.71e-13,71;UBERON:0004290,7.71e-13,71;UBERON:0009618,7.71e-13,71;UBERON:0003077,1.75e-12,72;UBERON:0007285,1.75e-12,72;UBERON:0001134,1.09e-11,62;UBERON:0002036,1.09e-11,62;UBERON:0003082,1.09e-11,62;UBERON:0001013,1.89e-11,14;UBERON:0003102,3.48e-11,99;UBERON:0002385,5.63e-11,64;UBERON:0001015,5.63e-11,64;UBERON:0000383,5.63e-11,64;UBERON:0000486,9.71e-11,83;UBERON:0007503,1.43e-10,78;UBERON:0002097,1.48e-09,41;UBERON:0003104,6.44e-08,160;UBERON:0009142,6.44e-08,160;UBERON:0005256,3.00e-07,122 | |||
|phase1_expression=3.63356758541113,4.06790995392868,0.845726424575827,2.00146596706261,3.12872766099101,1.74467704820074,5.06599756336621,4.42203911398782,2.35067065379855,0,0,0,1.31883489114227,1.8564952944007,7.95353701746998,3.36162573225888,1.20538905604795,2.92124036154949,4.87932798790507,0.246242116153576,1.63200552995402,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.255725123687061,3.61439152384566,4.01070328508712,3.62116297402059,6.36228757640879,6.32625331393427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.77282716330412,1.19168262731897,23.8074395221515,2.83734705758686,0.560677600142307,2.1349799145941,0.98667019366864,0.933633106199299,2.2900814251847,0.980771418680752,4.38936540170301,19.58998143232,0.937285727335186,3.1216007683032,0,3.58676833324323,0.117434498643765,2.10434827678571,0.98315564691574,3.67477508258808,1.84251475967652,1.23990937410919,7.12801714369232,4.94533858557114,1.82032272387605,1.43723628363248,1.34668891163253,0.625592599359821,0.831192346452549,1.31693286264251,3.98434134538726,2.55404700141215,1.02088964844019,19.553470290086,8.96941033037983,5.72216133130817,21.606558918077,4.94652140344507,14.6855107826009,4.28068769562657,8.43881661206331,3.70260619612555,11.107086066741,2.85354685791128,1.13152239773168,22.0105947360301,1.91428986632517,2.7129694769678,0,0,0,0,0,0,0,0,0,1.56449532329816,11.5783368874719,0,3.25057549622385,5.0531563716871,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0,0,0,0,0,0,1.95484983186195,1.03993478527958,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,1.12131084345361,1.74384027533312,0.5867062865676,1.93907573636667,3.57656445851882,11.834238535784,3.19125739901845,1.04007436911366,2.57207374262142,1.41849132023278,3.72991050622539,2.7165818795048,11.9376753186117,1.64648067356154,2.28015329005615,1.42156779497018,0.791951872933429,0,0,0,0,0,0,3.35474797688216,4.59447743336456,0,3.18518874668674,1.2328579353023,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,3.18997878469764,5.50187573165645,5.96783052139418,2.49565033836969,3.21172179834891,1.89242898040722,1.87426263988341,1.50473049863859,0,2.0694614258501,3.98535359121262,1.29058417979192,1.65078867489357,3.52442083432933,7.20601190002797,0,0,0,0,1.66435439510497,0,2.72918588600655,1.84154367945675,1.96462066103151,0.640695746278505,2.04682899626681,2.0911009748669,2.96836132889982,4.78050050788232,6.92490728721196,3.03870477251094,4.67328986265259,4.53220475993841,0,0,0,3.67406234126742,4.91646153618136,6.81846957789005,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,3.19013370364003,4.1593126620954,3.83759186815324,2.34322173223702,4.83391101907231,5.80066775656914,2.55679882248303,3.20515328328254,0,0,0,0,0,17.6294914225158,1.3940745403212,0.616067160352178,0.532306030317022,0,1.29726953372744,0,2.232950216158,0.632758849437452,0.571890581771475,1.535386747868,18.8293154734925,1.90921948755562,1.56989728039846,2.15846949099978,2.74537029736055,2.00281083987667,0.202182481573316,0,1.26377536871694,2.43816869544795,0.731140468893853,2.11300293513511,2.32049849393576,6.22183900596336,1.13008116620243,2.75682671773062,0,0,4.6302042741335,3.27947376023316,0,0.30982349809975,2.25356482025793,0.286822704408103,0.491245205065606,0.35667105148125,1.77380532035299,4.22215270595328,3.29294892959902,0,2.0996083214699,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988823245360557,0,0.398495976502139,0,0,0,0,2.17727711363265,0,0,0,0.986434056369336,0,2.22273980289274,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0.31900115973192,2.10674464824283,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,4.01288823649394,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,2.27144668714639,2.40780445460263,0,0,0,0.0969890164884194,0,0.225980740780532,2.19267079434801,0,0,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,4.07992870545287,1.15580235960608,0,0,0,0,0,1.67569440763353,0.229160424011684,0,0,0,0.223171457441873,0.268733889946905,3.96329871896644,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,1.32418394073086,0,2.71499800876856,2.5926644736038,6.85833456229759,0,0,1.70388021785422,0,0,0,0,0,0,0,0,0.157204305099666,2.48543433208317,0.496166021811951,0.592834895693833,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82318983637806,0,0,6.56721132702246,10.2833856332779,7.76728206103659,6.43970217935303,14.8425062034019,7.11848977277229,4.57680136793847,7.410315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| ||
|short_description=p@chr2:238233221..238233252,- | |short_description=p@chr2:238233221..238233252,- | ||
}} | }} |
Latest revision as of 08:09, 29 July 2015
Short description: | p@chr2:238233221..238233252, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238233221..238233252, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.26e-29 | 76 |
multi fate stem cell | 7.73e-22 | 427 |
somatic stem cell | 7.01e-21 | 433 |
stem cell | 1.19e-19 | 441 |
connective tissue cell | 1.68e-15 | 361 |
skin fibroblast | 5.27e-13 | 23 |
mesenchymal cell | 1.41e-12 | 354 |
muscle precursor cell | 2.33e-11 | 58 |
myoblast | 2.33e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.33e-11 | 58 |
muscle cell | 7.03e-11 | 55 |
motile cell | 3.25e-10 | 386 |
mesenchymal stem cell of adipose | 2.61e-09 | 8 |
electrically responsive cell | 7.42e-09 | 61 |
electrically active cell | 7.42e-09 | 61 |
preadipocyte | 4.62e-08 | 12 |
stromal cell | 1.32e-07 | 28 |
smooth muscle cell | 3.04e-07 | 43 |
smooth muscle myoblast | 3.04e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.20e-16 | 371 |
dense mesenchyme tissue | 4.07e-13 | 73 |
integument | 6.85e-13 | 46 |
integumental system | 6.85e-13 | 46 |
somite | 7.71e-13 | 71 |
presomitic mesoderm | 7.71e-13 | 71 |
presumptive segmental plate | 7.71e-13 | 71 |
dermomyotome | 7.71e-13 | 71 |
trunk paraxial mesoderm | 7.71e-13 | 71 |
paraxial mesoderm | 1.75e-12 | 72 |
presumptive paraxial mesoderm | 1.75e-12 | 72 |
skeletal muscle tissue | 1.09e-11 | 62 |
striated muscle tissue | 1.09e-11 | 62 |
myotome | 1.09e-11 | 62 |
adipose tissue | 1.89e-11 | 14 |
surface structure | 3.48e-11 | 99 |
muscle tissue | 5.63e-11 | 64 |
musculature | 5.63e-11 | 64 |
musculature of body | 5.63e-11 | 64 |
multilaminar epithelium | 9.71e-11 | 83 |
epithelial vesicle | 1.43e-10 | 78 |
skin of body | 1.48e-09 | 41 |
mesenchyme | 6.44e-08 | 160 |
entire embryonic mesenchyme | 6.44e-08 | 160 |
trunk mesenchyme | 3.00e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.27e-08 | 14 |
musculoskeletal system disease | 6.25e-07 | 5 |
myotonic disease | 6.25e-07 | 5 |
muscle tissue disease | 6.25e-07 | 5 |
myopathy | 6.25e-07 | 5 |
muscular disease | 6.25e-07 | 5 |
myotonic dystrophy | 6.25e-07 | 5 |