FFCP PHASE1:Hg19::chr2:238233367..238233381,-: Difference between revisions
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|id=chr2:238233367..238233381,-
|short_description=p@chr2:238233367..238233381,-
|description=CAGE_peak_at_chr2:238233367..238233381,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:238233367..238233381,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238233367..238233381,- | |||
|id=chr2:238233367..238233381,- | |||
|ontology_enrichment_celltype=CL:0000055!1.48e-34!180;CL:0000057!8.95e-27!75;CL:0000048!8.60e-17!430;CL:0000723!7.05e-16!436;CL:0000034!4.52e-15!444;CL:0002620!1.93e-14!23;CL:0000680!3.92e-14!57;CL:0000056!3.92e-14!57;CL:0000355!3.92e-14!57;CL:0000183!1.02e-13!59;CL:0000187!7.46e-13!54;CL:0000393!2.30e-10!60;CL:0000211!2.30e-10!60;CL:0002320!4.81e-10!365;CL:0000192!5.00e-10!42;CL:0000514!5.00e-10!42;CL:0002371!1.03e-08!591;CL:0000134!5.59e-08!358 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.87e-13;23!CL:0000723;2.85e-09;61!CL:0002570;2.90e-09;8!CL:0000134;3.08e-09;55!CL:0000048;4.98e-08;58!CL:0000034;7.79e-08;69!CL:0000135;4.41e-07;3!CL:0000388;4.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.70e-14,76;CL:0002620,8.48e-13,23;CL:0000048,5.20e-12,427;CL:0000723,1.53e-11,433;CL:0000034,6.14e-11,441;CL:0002320,8.13e-10,361;CL:0002570,2.67e-09,8;CL:0000134,7.97e-08,354;CL:0000135,4.02e-07,3;CL:0000388,4.02e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.31e-09;5!DOID:450;1.31e-09;5!DOID:66;1.31e-09;5!DOID:423;1.31e-09;5!DOID:0080000;1.31e-09;5!DOID:11722;1.31e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.39e-09,5;DOID:450,1.39e-09,5;DOID:66,1.39e-09,5;DOID:423,1.39e-09,5;DOID:0080000,1.39e-09,5;DOID:11722,1.39e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.76e-20!83;UBERON:0002329!7.76e-20!83;UBERON:0003077!7.76e-20!83;UBERON:0003059!7.76e-20!83;UBERON:0007282!7.76e-20!83;UBERON:0009618!7.76e-20!83;UBERON:0007285!7.76e-20!83;UBERON:0004290!2.48e-17!70;UBERON:0001134!9.30e-15!61;UBERON:0002036!9.30e-15!61;UBERON:0003082!9.30e-15!61;UBERON:0002385!1.15e-14!63;UBERON:0001015!1.15e-14!63;UBERON:0000383!1.15e-14!63;UBERON:0000486!4.60e-14!82;UBERON:0005256!4.87e-12!143;UBERON:0002384!2.42e-10!375;UBERON:0003102!3.01e-10!95;UBERON:0002199!1.11e-09!45;UBERON:0002416!1.11e-09!45;UBERON:0002100!4.35e-08!216;UBERON:0002097!5.66e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;8.66e-09;46!UBERON:0002416;8.66e-09;46!UBERON:0002097;5.58e-08;41!UBERON:0007846;4.41e-07;3!UBERON:0000043;4.41e-07;3!UBERON:0007845;4.41e-07;3!UBERON:0002384;6.06e-07;198!UBERON:0003102;8.88e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.75e-12,46;UBERON:0002416,3.75e-12,46;UBERON:0002097,3.92e-10,41;UBERON:0002384,1.32e-09,371;UBERON:0003102,8.34e-08,99;UBERON:0007846,4.02e-07,3;UBERON:0000043,4.02e-07,3;UBERON:0007845,4.02e-07,3;UBERON:0007524,5.83e-07,73 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.140954404095971,1.0007329835313,0.893922188854576,0,0,1.26343974685366,0.783556884599516,0.491467873003018,0,0,0,0.990130823680373,1.65698687863958,1.34465029290355,1.20538905604795,2.19093027116212,1.46379839637152,0,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,3.00802746381534,0.869079113764942,1.5905718941022,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.633152558322899,0.132409180813219,8.3182620017156,1.06400514659507,0,1.06748995729705,0.49333509683432,0,1.0776853765575,0.980771418680752,1.66493170409425,2.30470369792,0.234321431833797,1.5608003841516,1.1409436430889,2.24173020827702,0.23486899728753,0.485618833104395,0.140450806702248,1.83738754129404,0.245668634623536,0.929932030581889,1.18800285728205,1.97813543422845,0,0,0.505008341862199,0.500474079487857,0.277064115484183,0.877955241761676,0.612975591598039,0.751190294532984,0.113432183160021,2.87023417102179,2.13557388818567,1.69545520927649,5.40163972951924,1.03052529238439,3.09168648054755,1.30281799432113,1.68776332241266,0.974370051611986,3.02920529092937,0.276149695926898,0.161646056818812,6.39017266529906,0.604512589365842,1.3564847384839,0,0,0,0,0,0.116193942869518,0,0,0,0,2.57296375277154,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.387815147273333,0,5.071816515336,1.06375246633948,1.04007436911366,0.257207374262142,0,1.3321108950805,1.57275793023962,4.34097284313154,2.46972101034231,0.65147236858747,0.710783897485092,0.791951872933429,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,1.00034104211935,1.35632511849868,1.45579603071565,1.24900292158013,0.473107245101804,0.702848489956279,0.601892199455438,0,1.03473071292505,1.32845119707087,0.368738337083406,0.695068915744663,1.56640925970192,3.43143423810856,0,0,0,0,0,0,0.496215615637554,0.920771839728375,1.12264037773229,0.512556597022804,0,0.804269605718038,0,2.15893571323718,1.42049380250502,0.492762936082855,0,1.85936605535935,0,0,0,0.918515585316854,3.45973219212762,2.49136388422906,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.193341436584244,1.07834031980251,1.22802939780904,0.964856007391714,1.18162269355101,1.30515024522806,1.19317278382541,0.534192213880424,0,0,0,0,1.39453664789186,6.92587163027408,0,0.308033580176089,0,0.869932992075073,0,0,2.232950216158,0,0,0.255897791311334,2.56763392820352,0.636406495851874,0.78494864019923,0.899362287916574,0.823611089208164,1.06031162111118,0.202182481573316,0,0.421258456238981,0,0.243713489631284,2.11300293513511,0.818999468447914,4.52497382251881,0,0.551365343546124,0,0,1.73632660280006,2.62357900818653,0.405820753925408,0,0.845086807596724,0.430234056612155,0.196498082026242,0.35667105148125,0.354761064070598,1.47775344708365,0.658589785919804,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0.242780379534093,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,1.0319161948297,0,0,0,0.0969890164884194,0,0.225980740780532,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815985741090574,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0.542999601753713,1.72844298240254,1.30634944043764,0,0,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0.828478110694391,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11739237728355,0,0,2.23882204330311,3.50569964770837,6.10286447652875,2.65164207385125,4.27665432979378,0.889811221596536,0.686520205190771,2.11723293268535,2.02068360757615,1.33069634990671,0.159296767163702,0.449803112163605,0.776314784381297,2.48823724704513,4.78515086204391,1.5652351854352,0.150257608997218,0,0.406870733204662,1.09109195521536,0.214821114084977,1.39210127963548,1.19428766609585,0,2.74716564146234,5.05124233148879,0,0,0,0,0,1.62065732026684,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0,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| ||
|short_description=p@chr2:238233367..238233381,- | |||
}} | }} |
Latest revision as of 08:10, 29 July 2015
Short description: | p@chr2:238233367..238233381, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238233367..238233381, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.70e-14 | 76 |
skin fibroblast | 8.48e-13 | 23 |
multi fate stem cell | 5.20e-12 | 427 |
somatic stem cell | 1.53e-11 | 433 |
stem cell | 6.14e-11 | 441 |
connective tissue cell | 8.13e-10 | 361 |
mesenchymal stem cell of adipose | 2.67e-09 | 8 |
mesenchymal cell | 7.97e-08 | 354 |
fibrocyte | 4.02e-07 | 3 |
tendon cell | 4.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 3.75e-12 | 46 |
integumental system | 3.75e-12 | 46 |
skin of body | 3.92e-10 | 41 |
connective tissue | 1.32e-09 | 371 |
surface structure | 8.34e-08 | 99 |
dense regular connective tissue | 4.02e-07 | 3 |
tendon | 4.02e-07 | 3 |
regular connective tissue | 4.02e-07 | 3 |
dense mesenchyme tissue | 5.83e-07 | 73 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.39e-09 | 5 |
myotonic disease | 1.39e-09 | 5 |
muscle tissue disease | 1.39e-09 | 5 |
myopathy | 1.39e-09 | 5 |
muscular disease | 1.39e-09 | 5 |
myotonic dystrophy | 1.39e-09 | 5 |