FFCP PHASE1:Hg19::chr2:238247690..238247710,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:238247690..238247710,- to FFCP PHASE1:Hg19::chr2:238247690..238247710,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:238247690..238247710,- | |||
|coexpression_cluster_id=C332 | |||
|description=CAGE_peak_at_chr2:238247690..238247710,- | |||
|id=chr2:238247690..238247710,- | |||
|ontology_enrichment_celltype=CL:0000055!5.63e-36!180;CL:0000057!6.36e-30!75;CL:0000048!3.73e-16!430;CL:0000723!2.72e-15!436;CL:0000034!3.45e-14!444;CL:0000680!1.65e-13!57;CL:0000056!1.65e-13!57;CL:0000355!1.65e-13!57;CL:0000183!1.38e-12!59;CL:0000187!4.42e-12!54;CL:0002620!2.50e-11!23;CL:0000393!9.21e-10!60;CL:0000211!9.21e-10!60;CL:0002320!2.47e-09!365;CL:0002371!3.62e-09!591;CL:0002334!5.59e-08!12;CL:0000134!1.01e-07!358;CL:0000499!1.08e-07!27;CL:0000192!1.14e-07!42;CL:0000514!1.14e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.18e-16;23!CL:0000057;3.58e-12;73!CL:0002570;8.04e-11;8!CL:0002334;1.06e-08;12!CL:0002320;5.43e-08;188!CL:0002556;2.74e-07;6!CL:0002552;7.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.45e-30,76;CL:0000048,1.07e-16,427;CL:0002620,1.78e-16,23;CL:0000723,3.76e-16,433;CL:0000034,1.91e-15,441;CL:0002320,6.64e-13,361;CL:0000134,4.61e-11,354;CL:0002570,1.19e-10,8;CL:0000219,3.90e-09,386;CL:0002334,1.83e-08,12;CL:0002552,3.63e-07,5;CL:0002556,4.23e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.78e-11;5!DOID:450;3.78e-11;5!DOID:66;3.78e-11;5!DOID:423;3.78e-11;5!DOID:0080000;3.78e-11;5!DOID:11722;3.78e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.85e-11,5;DOID:450,2.85e-11,5;DOID:66,2.85e-11,5;DOID:423,2.85e-11,5;DOID:0080000,2.85e-11,5;DOID:11722,2.85e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.23e-16!83;UBERON:0002329!1.23e-16!83;UBERON:0003077!1.23e-16!83;UBERON:0003059!1.23e-16!83;UBERON:0007282!1.23e-16!83;UBERON:0009618!1.23e-16!83;UBERON:0007285!1.23e-16!83;UBERON:0002385!1.63e-13!63;UBERON:0001015!1.63e-13!63;UBERON:0000383!1.63e-13!63;UBERON:0001134!2.00e-13!61;UBERON:0002036!2.00e-13!61;UBERON:0003082!2.00e-13!61;UBERON:0004290!2.08e-13!70;UBERON:0003102!9.11e-12!95;UBERON:0005256!7.81e-11!143;UBERON:0000486!8.35e-11!82;UBERON:0002384!1.42e-09!375;UBERON:0002199!8.26e-09!45;UBERON:0002416!8.26e-09!45;UBERON:0002100!2.53e-08!216;UBERON:0000475!4.47e-08!365;UBERON:0002097!5.60e-08!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.82e-09;46!UBERON:0002416;1.82e-09;46!UBERON:0002097;9.77e-09;41!UBERON:0002384;4.90e-08;198!UBERON:0001013;2.45e-07;14!UBERON:0001758;2.74e-07;6!UBERON:0003672;2.74e-07;6!UBERON:0003102;4.68e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.74e-14,99;UBERON:0002199,3.95e-12,46;UBERON:0002416,3.95e-12,46;UBERON:0002384,4.86e-12,371;UBERON:0002097,2.34e-11,41;UBERON:0001013,4.03e-07,14;UBERON:0001758,4.23e-07,6;UBERON:0003672,4.23e-07,6 | |||
|phase1_expression=3.27021082687002,3.21150785836475,0.986680828671798,0,0.446961094427288,0,0,0,1.04474251279935,0.737201809504527,0,0.655324116390517,0.263766978228454,1.36142988256051,0.994192127183747,1.34465029290355,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,1.0843174571537,3.00802746381534,0.724232594804119,2.3858578411533,2.43317435151318,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,1.45650098894541,3.44203944898576,0,0.560677600142307,2.1349799145941,0,1.55605517699883,0.269421344139376,0.326923806226917,1.96764655938411,0.576175924479999,0.70296429550139,0,0,1.49448680551801,0.23486899728753,0.647491777472526,0,1.83738754129404,0.61417158655884,2.89312187292143,2.37600571456411,3.95627086845691,0,0,1.0100166837244,1.62654075833553,1.38532057742091,1.31693286264251,1.5324389789951,0.600952235626387,0.226864366320042,2.87023417102179,3.20336083227851,3.39091041855299,3.60109315301283,2.67936576019941,2.31876486041066,2.23340227597908,8.27004027982204,2.92311015483596,0.757301322732344,1.65689817556139,1.61646056818812,2.13005755509969,1.30977727695932,1.3564847384839,0,0,0,0,0,0,0,0,0,0,3.21620469096443,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0,0,0,0,1.3032332212413,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.4400297149257,0.775630294546667,3.57656445851882,1.690605505112,2.12750493267896,0,0.771622122786426,0,0.266422179016099,1.71573592389777,3.25572963234866,0.823240336780769,1.30294473717494,0.710783897485092,0,0,0,0,0,0,0,1.4377491329495,1.14861935834114,0,1.30303176000821,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,2.33113834266366,1.50051156317903,0,0.415941723061614,0.535286966391485,0.157702415033935,0.35142424497814,0.300946099727719,0,0,4.64957918974806,0.553107505625109,1.04260337361699,1.56640925970192,0.343143423810856,0,0,0,0,0,0,1.24053903909388,1.68808170616869,1.12264037773229,0.128139149255701,1.53512174720011,1.12597744800525,0,2.31314540703983,0.887808626565635,1.56041596426237,2.07701771673448,0.697262270759755,0,0,0,1.95184561879831,2.36718518408732,1.57349297951309,0,0,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,2.22342652071881,0.924291702687866,0.614014698904518,0.551346289938122,1.50388342815583,2.0302337147992,0.681813019328807,2.58192903375538,0,0,0,0,0.929691098594572,5.98143458978216,0,0,0,0,0.18532421910392,0.143124886741991,0.744316738719335,0,0,0.767693373934002,2.99557291623744,1.27281299170375,0,1.07923474549989,0.54907405947211,0.235624804691373,0.202182481573316,1.58510321173008,0,0.975267478179181,0.243713489631284,0,1.63799893689583,3.81794666275024,0,2.2054613741845,0,0,3.47265320560013,1.31178950409327,0,0.30982349809975,0.281695602532241,0.143411352204052,0.392996164052485,1.426684205925,0.354761064070598,0.422215270595328,0.987884678879706,1.51789269506286,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0,0,1.86623752597084,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,1.89184635718778,0,0,0,0,0,0,0.822251547880505,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,3.87593227018023,0.866851769704557,0,0,0,0,0,0.558564802544508,0,0,0,0,0.223171457441873,0.201550417460179,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0.542999601753713,1.72844298240254,2.28611152076586,0,0,0.851940108927109,0,0,0,0,0,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,1.64180283175561,2.10341978862502,0,0.757612021100357,3.27038272278348,6.22867855117575,0.228840068396924,0.604923695052956,0.621748802331122,0.147855149989634,0.477890301491107,0.899606224327209,0.465788870628778,4.14706207840855,1.59505028734797,1.5652351854352,0.150257608997218,0.761610424337591,0.813741466409323,0.545545977607678,0.107410557042488,0,1.19428766609585,0,1.37358282073117,1.01024846629776,0,0,0,0,0,0.231522474323834,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,2.7562092961788,0,0,0,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0.198916222116275,0.225630985047772,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,1.8863681038116,0,0,0,0,0.1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| ||
|short_description=p@chr2:238247690..238247710,- | |||
}} | }} |
Latest revision as of 08:10, 29 July 2015
Short description: | p@chr2:238247690..238247710, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238247690..238247710, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.45e-30 | 76 |
multi fate stem cell | 1.07e-16 | 427 |
skin fibroblast | 1.78e-16 | 23 |
somatic stem cell | 3.76e-16 | 433 |
stem cell | 1.91e-15 | 441 |
connective tissue cell | 6.64e-13 | 361 |
mesenchymal cell | 4.61e-11 | 354 |
mesenchymal stem cell of adipose | 1.19e-10 | 8 |
motile cell | 3.90e-09 | 386 |
preadipocyte | 1.83e-08 | 12 |
fibroblast of gingiva | 3.63e-07 | 5 |
fibroblast of periodontium | 4.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.74e-14 | 99 |
integument | 3.95e-12 | 46 |
integumental system | 3.95e-12 | 46 |
connective tissue | 4.86e-12 | 371 |
skin of body | 2.34e-11 | 41 |
adipose tissue | 4.03e-07 | 14 |
periodontium | 4.23e-07 | 6 |
dentition | 4.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.85e-11 | 5 |
myotonic disease | 2.85e-11 | 5 |
muscle tissue disease | 2.85e-11 | 5 |
myopathy | 2.85e-11 | 5 |
muscular disease | 2.85e-11 | 5 |
myotonic dystrophy | 2.85e-11 | 5 |