FFCP PHASE1:Hg19::chr2:29353207..29353220,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:29353207..29353220,- | |||
|coexpression_cluster_id=C619 | |||
|description=CAGE_peak_at_chr2:29353207..29353220,- | |description=CAGE_peak_at_chr2:29353207..29353220,- | ||
|id=chr2:29353207..29353220,- | |id=chr2:29353207..29353220,- | ||
|ontology_enrichment_celltype=CL:0000860!4.56e-18!45;CL:0002057!1.44e-17!42;CL:0002194!1.94e-10!63;CL:0000576!1.94e-10!63;CL:0000040!1.94e-10!63;CL:0000559!1.94e-10!63;CL:0002009!7.86e-10!65;CL:0000839!3.62e-09!70;CL:0000557!6.57e-09!71;CL:0000766!9.92e-08!76 | |ontology_enrichment_celltype=CL:0000860!4.56e-18!45;CL:0002057!1.44e-17!42;CL:0002194!1.94e-10!63;CL:0000576!1.94e-10!63;CL:0000040!1.94e-10!63;CL:0000559!1.94e-10!63;CL:0002009!7.86e-10!65;CL:0000839!3.62e-09!70;CL:0000557!6.57e-09!71;CL:0000766!9.92e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.37e-43;33!CL:0002057;3.37e-43;33!CL:0000473;4.66e-28;39!CL:0000234;4.66e-28;39!CL:0000576;2.55e-20;48!CL:0000159;3.46e-10;2!CL:0000766;3.65e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.24e-36,42;CL:0002057,1.24e-36,42;CL:0000473,1.91e-31,48;CL:0000234,1.91e-31,48;CL:0002194,3.48e-24,59;CL:0000576,3.48e-24,59;CL:0000040,3.48e-24,59;CL:0000559,3.48e-24,59;CL:0002009,3.00e-23,61;CL:0000839,3.73e-21,66;CL:0000557,8.99e-21,67;CL:0000766,5.06e-19,72;CL:0000763,3.39e-11,108;CL:0000049,3.39e-11,108;CL:0002087,3.02e-10,115;CL:0000159,3.97e-10,2;CL:0002031,1.23e-09,120;CL:0000738,5.36e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.47e-25;42!UBERON:0001041;2.90e-08;30 | |||
|ontology_enrichment_disease=DOID:305!3.23e-09!106 | |ontology_enrichment_disease=DOID:305!3.23e-09!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.11e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0005153!7.95e-10!37;UBERON:0000162!1.14e-07!14;UBERON:0001353!1.14e-07!14;UBERON:0000163!1.14e-07!14;UBERON:0006866!1.14e-07!14;UBERON:0000164!1.14e-07!14;UBERON:0000931!1.14e-07!14;UBERON:0005157!1.27e-07!51;UBERON:0002371!1.33e-07!80;UBERON:0005911!1.42e-07!82;UBERON:0002367!1.92e-07!11;UBERON:0010147!1.92e-07!11;UBERON:0009846!1.92e-07!11;UBERON:0003353!1.92e-07!11;UBERON:0004902!1.92e-07!11;UBERON:0003820!1.92e-07!11;UBERON:0009847!1.92e-07!11;UBERON:0004122!5.70e-07!15 | |ontology_enrichment_uberon=UBERON:0005153!7.95e-10!37;UBERON:0000162!1.14e-07!14;UBERON:0001353!1.14e-07!14;UBERON:0000163!1.14e-07!14;UBERON:0006866!1.14e-07!14;UBERON:0000164!1.14e-07!14;UBERON:0000931!1.14e-07!14;UBERON:0005157!1.27e-07!51;UBERON:0002371!1.33e-07!80;UBERON:0005911!1.42e-07!82;UBERON:0002367!1.92e-07!11;UBERON:0010147!1.92e-07!11;UBERON:0009846!1.92e-07!11;UBERON:0003353!1.92e-07!11;UBERON:0004902!1.92e-07!11;UBERON:0003820!1.92e-07!11;UBERON:0009847!1.92e-07!11;UBERON:0004122!5.70e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.71e-18,76;UBERON:0001474,3.70e-16,82;UBERON:0004765,5.23e-16,90;UBERON:0001434,6.19e-14,100;UBERON:0002405,1.02e-13,93;UBERON:0002390,8.62e-13,98;UBERON:0003061,8.62e-13,98;UBERON:0002193,3.39e-11,108 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.369754010166788,0,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.697287110717054,1.6446715520873,0.929119112685311,1.7261543539329,1.5369642391746,1.89185783910868,0.689491361473237,3.87290810150296,4.06279459783025,0.188242339542605,1.36453075028923,1.57306439111559,3.06083892370903,3.53021929783703,2.55734850319616,0,0.598390972864896,0.426224750532694,1.16083695451434,3.40431134814684,1.86846674698672,3.26623264833766,3.12889751052121,2.38907729175628,1.81619850790011,6.2607198117886,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,1.45650098894541,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0,0.538168907066586,0.427114777637135,0,0.600182192168805,0.103052529238439,0.515281080091258,0,0.337552664482532,0,0.504867548488229,0.184099797284599,0,1.06502877754984,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.34444334449382,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,1.53135254993501,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,19.692329214317,0,0.197286811273867,0,0,0,0,0,0,0,0,0.682760689712998,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,7.9690672888342,0,0,0.587954384486266,0.261177619741208,0.17472666824203,1.71986032471617,0.19351266257817,0,0.164230914106418,0.290967049465258,0,0,0.137041924646751,0,0,0,0.400794101257669,0,0,0,0,0,0,2.73355578243952,0.235694034616795,0,0,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6418168160457,0,0,0,0,0,0,0,0,0,0.335434687599266,1.02447419488958,0.419636705079985,0,0.35857467866569,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,2.22412889249628,2.81926008926669,0,0,1.24271716604159,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.686520205190771,0,0,0.295710299979268,0.477890301491107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0.214441591374926,1.56596575179127,0,0,0,0.179088841081487,0.308801447160972,0,0,0.192914038270915,0.337884881306145,1.79369063011563,0,0.303859956177382,0,0,0,0,0,21.6280159703273,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,4.80342448971282,0,0,0,0,0,0,0,0,0,0,0.981477185010256,2.94924308369351,0,0.231051332300676,0,0,0,0,0,0,0,0,2.51355346568977,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,1.54339208493677,0,0,2.48207065856333,0,0.313972371402056,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,2.34896406775364,0.098150233615243,1.82876887473404,0,0,0,0,0,0,0,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,65.2362311182938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0,0.112131862580613,0.954707374172474,2.62752345645685,0.217716747896961,0,0.0673520530145875,0,0,0.0814032686109745,0.213454691755431,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.369754010166788,0,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.697287110717054,1.6446715520873,0.929119112685311,1.7261543539329,1.5369642391746,1.89185783910868,0.689491361473237,3.87290810150296,4.06279459783025,0.188242339542605,1.36453075028923,1.57306439111559,3.06083892370903,3.53021929783703,2.55734850319616,0,0.598390972864896,0.426224750532694,1.16083695451434,3.40431134814684,1.86846674698672,3.26623264833766,3.12889751052121,2.38907729175628,1.81619850790011,6.2607198117886,2.21523671208619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,1.45650098894541,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0,0.538168907066586,0.427114777637135,0,0.600182192168805,0.103052529238439,0.515281080091258,0,0.337552664482532,0,0.504867548488229,0.184099797284599,0,1.06502877754984,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.34444334449382,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,1.53135254993501,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0.572499546967965,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0,19.692329214317,0,0.197286811273867,0,0,0,0,0,0,0,0,0.682760689712998,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,7.9690672888342,0,0,0.587954384486266,0.261177619741208,0.17472666824203,1.71986032471617,0.19351266257817,0,0.164230914106418,0.290967049465258,0,0,0.137041924646751,0,0,0,0.400794101257669,0,0,0,0,0,0,2.73355578243952,0.235694034616795,0,0,0.407992870545287,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6418168160457,0,0,0,0,0,0,0,0,0,0.335434687599266,1.02447419488958,0.419636705079985,0,0.35857467866569,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,2.22412889249628,2.81926008926669,0,0,1.24271716604159,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.686520205190771,0,0,0.295710299979268,0.477890301491107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0.214441591374926,1.56596575179127,0,0,0,0.179088841081487,0.308801447160972,0,0,0.192914038270915,0.337884881306145,1.79369063011563,0,0.303859956177382,0,0,0,0,0,21.6280159703273,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,4.80342448971282,0,0,0,0,0,0,0,0,0,0,0.981477185010256,2.94924308369351,0,0.231051332300676,0,0,0,0,0,0,0,0,2.51355346568977,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,1.54339208493677,0,0,2.48207065856333,0,0.313972371402056,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,2.34896406775364,0.098150233615243,1.82876887473404,0,0,0,0,0,0,0,0.22589216407792,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,65.2362311182938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.476128862927481,0,0,0.112131862580613,0.954707374172474,2.62752345645685,0.217716747896961,0,0.0673520530145875,0,0,0.0814032686109745,0.213454691755431,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr2:29353207..29353220,- | |short_description=p@chr2:29353207..29353220,- | ||
}} | }} |
Latest revision as of 09:27, 29 July 2015
Short description: | p@chr2:29353207..29353220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:29353207..29353220, - |
Coexpression cluster: | C619_squamous_bile_Small_Mammary_mucinous_Tracheal_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.24e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-36 | 42 |
defensive cell | 1.91e-31 | 48 |
phagocyte | 1.91e-31 | 48 |
monopoietic cell | 3.48e-24 | 59 |
monocyte | 3.48e-24 | 59 |
monoblast | 3.48e-24 | 59 |
promonocyte | 3.48e-24 | 59 |
macrophage dendritic cell progenitor | 3.00e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.73e-21 | 66 |
granulocyte monocyte progenitor cell | 8.99e-21 | 67 |
myeloid leukocyte | 5.06e-19 | 72 |
myeloid cell | 3.39e-11 | 108 |
common myeloid progenitor | 3.39e-11 | 108 |
nongranular leukocyte | 3.02e-10 | 115 |
seromucus secreting cell | 3.97e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 1.23e-09 | 120 |
leukocyte | 5.36e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.71e-18 | 76 |
bone element | 3.70e-16 | 82 |
skeletal element | 5.23e-16 | 90 |
skeletal system | 6.19e-14 | 100 |
immune system | 1.02e-13 | 93 |
hematopoietic system | 8.62e-13 | 98 |
blood island | 8.62e-13 | 98 |
hemolymphoid system | 3.39e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.11e-08 | 106 |