FFCP PHASE1:Hg19::chr2:33701603..33701615,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:33701603..33701615,- | |||
|coexpression_cluster_id=C622 | |||
|description=CAGE_peak_at_chr2:33701603..33701615,- | |description=CAGE_peak_at_chr2:33701603..33701615,- | ||
|id=chr2:33701603..33701615,- | |id=chr2:33701603..33701615,- | ||
|ontology_enrichment_celltype=CL:0000738!4.30e-42!140;CL:0002087!1.12e-39!119;CL:0002031!8.52e-37!124;CL:0000037!4.18e-35!172;CL:0000566!4.18e-35!172;CL:0000988!1.90e-33!182;CL:0002032!7.35e-31!165;CL:0000837!7.35e-31!165;CL:0000542!4.30e-30!53;CL:0000051!4.30e-30!53;CL:0000838!2.77e-29!52;CL:0000945!2.25e-24!24;CL:0000826!2.25e-24!24;CL:0000236!6.41e-17!14;CL:0000557!2.96e-12!71;CL:0000766!1.64e-11!76;CL:0002009!1.27e-10!65;CL:0000134!1.49e-10!358;CL:0000839!1.61e-10!70;CL:0002194!3.10e-10!63;CL:0000576!3.10e-10!63;CL:0000040!3.10e-10!63;CL:0000559!3.10e-10!63;CL:0002320!3.56e-10!365;CL:0000763!3.64e-08!112;CL:0000049!3.64e-08!112;CL:0000219!6.85e-08!390;CL:0002057!2.80e-07!42;CL:0000624!3.00e-07!6 | |ontology_enrichment_celltype=CL:0000738!4.30e-42!140;CL:0002087!1.12e-39!119;CL:0002031!8.52e-37!124;CL:0000037!4.18e-35!172;CL:0000566!4.18e-35!172;CL:0000988!1.90e-33!182;CL:0002032!7.35e-31!165;CL:0000837!7.35e-31!165;CL:0000542!4.30e-30!53;CL:0000051!4.30e-30!53;CL:0000838!2.77e-29!52;CL:0000945!2.25e-24!24;CL:0000826!2.25e-24!24;CL:0000236!6.41e-17!14;CL:0000557!2.96e-12!71;CL:0000766!1.64e-11!76;CL:0002009!1.27e-10!65;CL:0000134!1.49e-10!358;CL:0000839!1.61e-10!70;CL:0002194!3.10e-10!63;CL:0000576!3.10e-10!63;CL:0000040!3.10e-10!63;CL:0000559!3.10e-10!63;CL:0002320!3.56e-10!365;CL:0000763!3.64e-08!112;CL:0000049!3.64e-08!112;CL:0000219!6.85e-08!390;CL:0002057!2.80e-07!42;CL:0000624!3.00e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.72e-41;13!CL:0000945;1.38e-25;24!CL:0000542;2.98e-23;53!CL:0000623;2.48e-14;3!CL:0002087;1.29e-08;104!CL:0000791;2.19e-08;18!CL:0000789;2.19e-08;18!CL:0002419;2.19e-08;18!CL:0000084;8.38e-08;25!CL:0002393;1.13e-07;6!CL:0002397;1.13e-07;6!CL:0000738;1.84e-07;136!CL:0000235;3.31e-07;6!CL:0000624;3.49e-07;6!CL:0000988;6.49e-07;177!CL:0000767;8.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.77e-38,14;CL:0000838,1.66e-37,52;CL:0000542,1.07e-36,53;CL:0000051,1.07e-36,53;CL:0000738,3.62e-33,136;CL:0002087,9.69e-31,115;CL:0002031,2.70e-29,120;CL:0000037,4.51e-29,168;CL:0000988,3.34e-27,177;CL:0002032,6.71e-27,161;CL:0000837,6.71e-27,161;CL:0000945,1.60e-25,24;CL:0000826,1.60e-25,24;CL:0000623,2.17e-14,3;CL:0000825,2.17e-14,3;CL:0000134,2.43e-11,354;CL:0002320,5.81e-11,361;CL:0000219,1.25e-09,386;CL:0000034,5.58e-09,441;CL:0000791,1.83e-08,18;CL:0000789,1.83e-08,18;CL:0002420,1.83e-08,18;CL:0002419,1.83e-08,18;CL:0000790,1.83e-08,18;CL:0000048,5.34e-08,427;CL:0000084,6.85e-08,25;CL:0000827,6.85e-08,25;CL:0000723,8.96e-08,433;CL:0000624,3.17e-07,6;CL:0000235,3.61e-07,6;CL:0000767,7.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.98e-23;53!CL:0000790;2.19e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.07e-15!102;UBERON:0003061!1.07e-15!102;UBERON:0002193!3.82e-15!112;UBERON:0002371!1.99e-11!80;UBERON:0002405!4.02e-11!115;UBERON:0001474!7.80e-10!86;UBERON:0002384!3.73e-09!375;UBERON:0004765!5.63e-08!101;UBERON:0001434!5.63e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!1.07e-15!102;UBERON:0003061!1.07e-15!102;UBERON:0002193!3.82e-15!112;UBERON:0002371!1.99e-11!80;UBERON:0002405!4.02e-11!115;UBERON:0001474!7.80e-10!86;UBERON:0002384!3.73e-09!375;UBERON:0004765!5.63e-08!101;UBERON:0001434!5.63e-08!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.91e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,2.75354993794233,1.53531759238885,0.464448369948228,0,0,0,0.697204805222715,0.284338464974843,0.880801318004542,8.30993112797816,2.20598892217156,5.64228263861215,1.79132379391939,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0.709446689665756,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,1.53041946185451,0.641858054152187,0.639337125799041,0,0.199463657621632,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,8.79981222306614,2.18455444504853,6.22656477704488,4.26730222566507,2.00197993518006,1.14950487990897,1.98313461835459,6.67837628174755,14.7995371968457,5.87237189370939,10.7036503875064,3.96513985737078,2.24203425192614,0.263384084775077,1.57367816091066,1.57204305099666,4.72883447698871,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0.294605907474837,0.443067789167242,0.812411591295047,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.226618685395132,0.383220493601921,2.06176467289578,0,0,0,0,0,0,0,0.236777252044017,0,1.81446068902259,2.40696176205157,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0,0.715471872916026,2.28797964312051,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.276149695926898,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,2.10833939483032,0,0,0,0.144781306667579,0,0,0.560425719967636,1.77327684181734,3.66566877261179,4.36366323351144,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.50999940573032,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0,0,1.05836791361941,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,0.996239941255349,0.276283915531148,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0,0.995261931078505,0,0,0.889563386041866,0.123563938946503,0,0.269604531922708,0.802577647298789,0,0.364909578431332,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,5.10986352267889,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0,0,0,3.86900977278975,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0.852548188666271,0,0,0,0,0.655745261419609,0,0,0.122026264901963,0,0,0.221858103073705,0.372578417648301,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,1.79988656269437,0,3.2720846135555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0.202612753855184,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0.691403925334676,0,0.203909198930495,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0.469919589899268,0,0.599646935549574,0,0.352894871715692,0.160482733378337,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0,0,0.26940821205835,0,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,2.75354993794233,1.53531759238885,0.464448369948228,0,0,0,0.697204805222715,0.284338464974843,0.880801318004542,8.30993112797816,2.20598892217156,5.64228263861215,1.79132379391939,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0.709446689665756,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,1.53041946185451,0.641858054152187,0.639337125799041,0,0.199463657621632,0.426224750532694,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,8.79981222306614,2.18455444504853,6.22656477704488,4.26730222566507,2.00197993518006,1.14950487990897,1.98313461835459,6.67837628174755,14.7995371968457,5.87237189370939,10.7036503875064,3.96513985737078,2.24203425192614,0.263384084775077,1.57367816091066,1.57204305099666,4.72883447698871,0,0.32592226663359,0.473447805734733,1.94826728407911,0,0.294605907474837,0.443067789167242,0.812411591295047,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.226618685395132,0.383220493601921,2.06176467289578,0,0,0,0,0,0,0,0.236777252044017,0,1.81446068902259,2.40696176205157,4.34473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,0,0.715471872916026,2.28797964312051,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0,0.554128230968366,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0.276149695926898,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,2.10833939483032,0,0,0,0.144781306667579,0,0,0.560425719967636,1.77327684181734,3.66566877261179,4.36366323351144,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.50999940573032,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0,0,1.05836791361941,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,0.996239941255349,0.276283915531148,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.591095237907095,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0,0.995261931078505,0,0,0.889563386041866,0.123563938946503,0,0.269604531922708,0.802577647298789,0,0.364909578431332,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,5.10986352267889,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0,0,0,3.86900977278975,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0.852548188666271,0,0,0,0,0.655745261419609,0,0,0.122026264901963,0,0,0.221858103073705,0.372578417648301,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,1.79988656269437,0,3.2720846135555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0.202612753855184,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0.691403925334676,0,0.203909198930495,0.131545547125698,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0.469919589899268,0,0.599646935549574,0,0.352894871715692,0.160482733378337,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0,0,0.26940821205835,0,0,0.0814032686109745,0,0,0,2.34640942403454,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr2:33701603..33701615,- | |short_description=p@chr2:33701603..33701615,- | ||
}} | }} |
Latest revision as of 09:41, 29 July 2015
Short description: | p@chr2:33701603..33701615, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:33701603..33701615, - |
Coexpression cluster: | C622_CD19_CD14_immature_Peripheral_Neutrophils_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.77e-38 | 14 |
lymphoid lineage restricted progenitor cell | 1.66e-37 | 52 |
lymphocyte | 1.07e-36 | 53 |
common lymphoid progenitor | 1.07e-36 | 53 |
leukocyte | 3.62e-33 | 136 |
nongranular leukocyte | 9.69e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 2.70e-29 | 120 |
hematopoietic stem cell | 4.51e-29 | 168 |
hematopoietic cell | 3.34e-27 | 177 |
hematopoietic oligopotent progenitor cell | 6.71e-27 | 161 |
hematopoietic multipotent progenitor cell | 6.71e-27 | 161 |
lymphocyte of B lineage | 1.60e-25 | 24 |
pro-B cell | 1.60e-25 | 24 |
natural killer cell | 2.17e-14 | 3 |
pro-NK cell | 2.17e-14 | 3 |
mesenchymal cell | 2.43e-11 | 354 |
connective tissue cell | 5.81e-11 | 361 |
motile cell | 1.25e-09 | 386 |
stem cell | 5.58e-09 | 441 |
mature alpha-beta T cell | 1.83e-08 | 18 |
alpha-beta T cell | 1.83e-08 | 18 |
immature T cell | 1.83e-08 | 18 |
mature T cell | 1.83e-08 | 18 |
immature alpha-beta T cell | 1.83e-08 | 18 |
multi fate stem cell | 5.34e-08 | 427 |
T cell | 6.85e-08 | 25 |
pro-T cell | 6.85e-08 | 25 |
somatic stem cell | 8.96e-08 | 433 |
CD4-positive, alpha-beta T cell | 3.17e-07 | 6 |
macrophage | 3.61e-07 | 6 |
basophil | 7.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.91e-10 | 371 |