FFCP PHASE1:Hg19::chr2:36726393..36726410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:36726393..36726410,+ | |||
|coexpression_cluster_id=C2699 | |coexpression_cluster_id=C2699 | ||
|description=CAGE_peak_at_chr2:36726393..36726410,+ | |description=CAGE_peak_at_chr2:36726393..36726410,+ | ||
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|ontology_enrichment_celltype=CL:0000222!1.34e-12!119;CL:0000057!4.71e-12!75;CL:0000055!5.36e-12!180;CL:0000213!8.70e-11!57;CL:0000215!8.70e-11!57;CL:0000220!1.28e-10!246;CL:0002321!3.24e-10!248;CL:0002139!7.63e-08!24;CL:0000077!8.18e-07!19;CL:0000066!9.66e-07!254 | |ontology_enrichment_celltype=CL:0000222!1.34e-12!119;CL:0000057!4.71e-12!75;CL:0000055!5.36e-12!180;CL:0000213!8.70e-11!57;CL:0000215!8.70e-11!57;CL:0000220!1.28e-10!246;CL:0002321!3.24e-10!248;CL:0002139!7.63e-08!24;CL:0000077!8.18e-07!19;CL:0000066!9.66e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.52e-10;5!CL:0002334;1.29e-09;12!CL:0002620;2.59e-08;23!CL:0000349;2.02e-07;19!CL:0002541;5.88e-07;3!CL:0002139;5.91e-07;24!CL:0002580;8.00e-07;3!CL:0002595;9.92e-07;5 | |ontology_enrichment_celltype_v019=CL:0002537;1.52e-10;5!CL:0002334;1.29e-09;12!CL:0002620;2.59e-08;23!CL:0000349;2.02e-07;19!CL:0002541;5.88e-07;3!CL:0002139;5.91e-07;24!CL:0002580;8.00e-07;3!CL:0002595;9.92e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.46e-13,76;CL:0002537,6.93e-11,5;CL:0002334,2.55e-09,12;CL:0002620,1.57e-08,23;CL:0000349,1.40e-07,19;CL:0002541,5.56e-07,3;CL:0000213,5.76e-07,58;CL:0000215,5.76e-07,58;CL:0002139,5.79e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;9.92e-07;5!DOID:450;9.92e-07;5!DOID:66;9.92e-07;5!DOID:423;9.92e-07;5!DOID:0080000;9.92e-07;5!DOID:11722;9.92e-07;5 | |ontology_enrichment_disease_v019=DOID:17;9.92e-07;5!DOID:450;9.92e-07;5!DOID:66;9.92e-07;5!DOID:423;9.92e-07;5!DOID:0080000;9.92e-07;5!DOID:11722;9.92e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,5.98e-07,5;DOID:450,5.98e-07,5;DOID:66,5.98e-07,5;DOID:423,5.98e-07,5;DOID:0080000,5.98e-07,5;DOID:11722,5.98e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000468!6.58e-09!659;UBERON:0000490!1.92e-08!138;UBERON:0002049!3.72e-08!79;UBERON:0007798!3.72e-08!79;UBERON:0000467!1.00e-07!625;UBERON:0000055!1.22e-07!69;UBERON:0000480!1.37e-07!626;UBERON:0004872!7.50e-07!84 | |ontology_enrichment_uberon=UBERON:0000468!6.58e-09!659;UBERON:0000490!1.92e-08!138;UBERON:0002049!3.72e-08!79;UBERON:0007798!3.72e-08!79;UBERON:0000467!1.00e-07!625;UBERON:0000055!1.22e-07!69;UBERON:0000480!1.37e-07!626;UBERON:0004872!7.50e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.40e-12;10!UBERON:0000158;2.40e-12;10!UBERON:0000305;2.13e-07;7!UBERON:0003124;5.88e-07;3!UBERON:0000920;5.88e-07;3!UBERON:0003834;9.92e-07;5!UBERON:0001533;9.92e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.40e-12;10!UBERON:0000158;2.40e-12;10!UBERON:0000305;2.13e-07;7!UBERON:0003124;5.88e-07;3!UBERON:0000920;5.88e-07;3!UBERON:0003834;9.92e-07;5!UBERON:0001533;9.92e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,2.90e-09,8;UBERON:0005631,1.45e-08,14;UBERON:0000158,1.45e-08,14;UBERON:0002097,7.26e-08,41;UBERON:0000305,1.24e-07,7;UBERON:0002199,1.37e-07,46;UBERON:0002416,1.37e-07,46;UBERON:0000920,5.56e-07,3 | |||
|phase1_expression=0.726713517082227,4.49611100171065,0.704772020479856,3.00219895059391,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0,0.697801167972428,0.436882744260345,0,0.247532705920093,0,0.672325146451775,0,0,0.975865597581014,0.123121058076788,0,0.940364164434263,0.572471974262113,0.821246550437305,0.125542639594803,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.639312809217652,1.44575660953827,1.00267582127178,3.62116297402059,0,0.973269740605272,0.189069634328136,0.886917589850256,0.702678285545008,0,0,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0.596287222100115,0,0.347140501607594,0,1.25849830862972,4.95212475492121,1.04497483268405,0.775250277507987,2.13459757612026,0.33472061276467,0.805658634218294,0.760272105718513,2.68468263302986,1.47065232138347,4.0507097394088,0.982297011124877,0.44905874525234,0.675668882899933,0,0,0.916008719652036,0,0,0.436094052142534,2.48485975847659,0.886413581652058,0.132409180813219,1.43418310374407,0.354668382198357,2.24271040056923,2.1349799145941,2.22000793575444,0,0.538842688278752,0.326923806226917,0,0,0,0,0.570471821544449,0.448346041655403,0,0.323745888736263,0,0.61246251376468,0.368502951935304,0,1.18800285728205,0.989067717114227,0,0,0.505008341862199,0.125118519871964,0,0,3.0648779579902,0.600952235626387,0.907457465280168,1.79389635688862,1.70845911054854,1.05965950579781,2.70081986475962,0.92747276314595,1.28820270022815,1.8611685633159,1.18143432568886,0.974370051611986,1.26216887122057,0.0920498986422993,0,4.61512470271599,1.5112814734146,1.52604533079439,0.386521706326594,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,2.57296375277154,0,0.928735856063958,0,0.473227200159376,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0.71181185733329,0.539325232640658,0.392442930250692,0.38474715694639,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0.514703430895577,0.219500570817251,1.1240175325762,0.502644862058154,0.277765335475589,0.651616610620649,0,1.44331342025273,0.231860809950154,0,1.58803092537181,1.38895653772983,2.85381228351897,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0.503946384596579,0.283550194484773,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0,0.2933531432838,0.258543431515556,0,1.690605505112,1.32969058292435,3.12022310734098,0,1.41849132023278,0,1.14382394926518,0,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,1.09970290300263,0,0,2.10833939483032,0.718874566474748,2.29723871668228,0,1.15825045334063,1.2328579353023,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,6.78030157429215,1.57702415033935,0.702848489956279,0,0,0,1.32845119707087,0,0.347534457872331,0.195801157462741,0,0,0.215714200818617,0,0.606255142892519,0,0,1.24053903909388,1.07423381301644,2.24528075546459,1.92208723883551,0.511707249066704,2.0911009748669,1.48418066444991,1.07946785661859,0.177561725313127,0.246381468041427,1.03850885836724,0.581051892299796,0.362578348774867,0.601519410909855,0.184161977871793,0.68888668898764,0.546273504020151,0.917870904715969,0.451199612907412,0.693138033939733,0,0,0.422206515571503,0,0.680374821106063,0.647747748306418,0,0.541892875087706,0,0,0,0.223874754722178,0,0,0.256450125116389,1.31205858279882,0.650756789328606,0.309123034943167,0.0915694648183434,0,0,3.25030123018261,1.6068392984416,0,0,0.15350367472613,0.689182862422653,0.429680979473094,0.580066775656914,0.426133137080504,0.178064071293475,0.330569830721956,0.576570202095319,0.127612712494584,0.30347334256665,0.464845549297286,1.5740617341532,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0.762520775695299,0.511795582622668,0,0,1.56989728039846,0.359744915166629,1.64722217841633,0.824686816419805,0.202182481573316,0,0,0,2.68084838594413,0,0.272999822815972,0.424216295861138,0,1.10273068709225,1.32687795048244,1.31535265576129,0,0.655894752046633,0.608731130888112,0.6196469961995,0,0.286822704408103,0.982490410131212,1.07001315444375,0,0.844430541190656,0,0,0,0.192444225451024,0,0,0.282431402330337,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,1.67121139316383,2.07875276582847,1.84296421259539,0,0.140669416410513,0.222617410045812,0,0,0.996239941255349,0,0,0.20453736500431,0,3.11039587661807,0,0.179021174675609,0,0.295930216910801,0,0,0,0.185536196323703,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0,0.153900517007594,0.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| ||
|short_description=p@chr2:36726393..36726410,+ | |short_description=p@chr2:36726393..36726410,+ | ||
}} | }} |
Latest revision as of 09:46, 29 July 2015
Short description: | p@chr2:36726393..36726410, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:36726393..36726410, + |
Coexpression cluster: | C2699_Olfactory_Fibroblast_Endothelial_chorionic_Adipocyte_Chondrocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.46e-13 | 76 |
amnion mesenchymal stem cell | 6.93e-11 | 5 |
preadipocyte | 2.55e-09 | 12 |
skin fibroblast | 1.57e-08 | 23 |
extraembryonic cell | 1.40e-07 | 19 |
chorionic membrane mesenchymal stem cell | 5.56e-07 | 3 |
lining cell | 5.76e-07 | 58 |
barrier cell | 5.76e-07 | 58 |
endothelial cell of vascular tree | 5.79e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 2.90e-09 | 8 |
extraembryonic membrane | 1.45e-08 | 14 |
membranous layer | 1.45e-08 | 14 |
skin of body | 7.26e-08 | 41 |
amnion | 1.24e-07 | 7 |
integument | 1.37e-07 | 46 |
integumental system | 1.37e-07 | 46 |
egg chorion | 5.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.98e-07 | 5 |
myotonic disease | 5.98e-07 | 5 |
muscle tissue disease | 5.98e-07 | 5 |
myopathy | 5.98e-07 | 5 |
muscular disease | 5.98e-07 | 5 |
myotonic dystrophy | 5.98e-07 | 5 |