FFCP PHASE1:Hg19::chr2:43359692..43359706,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:43359692..43359706,- | |||
|coexpression_cluster_id=C98 | |coexpression_cluster_id=C98 | ||
|description=CAGE_peak_at_chr2:43359692..43359706,- | |description=CAGE_peak_at_chr2:43359692..43359706,- | ||
|id=chr2:43359692..43359706,- | |id=chr2:43359692..43359706,- | ||
|ontology_enrichment_celltype=CL:0000791!1.36e-40!18;CL:0000789!1.36e-40!18;CL:0002420!1.36e-40!18;CL:0002419!1.36e-40!18;CL:0000790!1.36e-40!18;CL:0000084!1.49e-31!25;CL:0000827!1.49e-31!25;CL:0000625!3.58e-30!11;CL:0000838!2.06e-17!52;CL:0000542!5.65e-17!53;CL:0000051!5.65e-17!53;CL:0002087!6.90e-12!119;CL:0000738!1.11e-10!140;CL:0000624!3.27e-10!6;CL:0000037!2.27e-09!172;CL:0000566!2.27e-09!172;CL:0000842!3.27e-09!3;CL:0000988!2.10e-08!182;CL:0002031!2.72e-08!124;CL:0002032!9.96e-08!165;CL:0000837!9.96e-08!165;CL:0000224!5.54e-07!4 | |ontology_enrichment_celltype=CL:0000791!1.36e-40!18;CL:0000789!1.36e-40!18;CL:0002420!1.36e-40!18;CL:0002419!1.36e-40!18;CL:0000790!1.36e-40!18;CL:0000084!1.49e-31!25;CL:0000827!1.49e-31!25;CL:0000625!3.58e-30!11;CL:0000838!2.06e-17!52;CL:0000542!5.65e-17!53;CL:0000051!5.65e-17!53;CL:0002087!6.90e-12!119;CL:0000738!1.11e-10!140;CL:0000624!3.27e-10!6;CL:0000037!2.27e-09!172;CL:0000566!2.27e-09!172;CL:0000842!3.27e-09!3;CL:0000988!2.10e-08!182;CL:0002031!2.72e-08!124;CL:0002032!9.96e-08!165;CL:0000837!9.96e-08!165;CL:0000224!5.54e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000625;3.66e-52;11!CL:0000791;1.52e-38;18!CL:0000789;1.52e-38;18!CL:0002419;1.52e-38;18!CL:0000084;4.47e-33;25!CL:0000226;1.05e-10;3!CL:0000842;1.05e-10;3!CL:0000542;1.63e-08;53!CL:0002127;2.74e-08;1!CL:0000911;2.74e-08;1!CL:0000814;2.74e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.35e-52,11;CL:0000791,1.35e-38,18;CL:0000789,1.35e-38,18;CL:0002420,1.35e-38,18;CL:0002419,1.35e-38,18;CL:0000790,1.35e-38,18;CL:0000084,4.41e-33,25;CL:0000827,4.41e-33,25;CL:0000838,6.54e-15,52;CL:0000542,1.36e-14,53;CL:0000051,1.36e-14,53;CL:0000226,1.11e-10,3;CL:0000842,1.11e-10,3;CL:0002127,3.79e-08,1;CL:0000914,3.79e-08,1;CL:0000911,3.79e-08,1;CL:0000814,3.79e-08,1;CL:0002042,3.79e-08,1;CL:0002039,3.79e-08,1;CL:0002040,3.79e-08,1;CL:0002041,3.79e-08,1;CL:0002087,4.01e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-38;18!CL:0000051;1.63e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.44e-13!7;UBERON:0002370!1.48e-11!4;UBERON:0005058!1.48e-11!4;UBERON:0009113!1.48e-11!4;UBERON:0003295!1.48e-11!4;UBERON:0005562!1.48e-11!4;UBERON:0000178!1.16e-10!15;UBERON:0000179!1.16e-10!15;UBERON:0000463!1.16e-10!15;UBERON:0003408!3.21e-09!10;UBERON:0000974!3.90e-09!10;UBERON:0003351!1.11e-07!6 | |ontology_enrichment_uberon=UBERON:0004177!1.44e-13!7;UBERON:0002370!1.48e-11!4;UBERON:0005058!1.48e-11!4;UBERON:0009113!1.48e-11!4;UBERON:0003295!1.48e-11!4;UBERON:0005562!1.48e-11!4;UBERON:0000178!1.16e-10!15;UBERON:0000179!1.16e-10!15;UBERON:0000463!1.16e-10!15;UBERON:0003408!3.21e-09!10;UBERON:0000974!3.90e-09!10;UBERON:0003351!1.11e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;7.75e-16;2!UBERON:0005058;7.75e-16;2!UBERON:0009113;7.75e-16;2!UBERON:0000178;1.14e-11;15!UBERON:0000179;1.14e-11;15!UBERON:0000463;1.14e-11;15!UBERON:0002390;5.21e-09;32!UBERON:0000029;1.42e-08;1!UBERON:0002193;6.93e-07;42!UBERON:0004177;7.60e-07;5!UBERON:0005057;7.60e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.71e-17,4;UBERON:0005058,7.71e-17,4;UBERON:0009113,7.71e-17,4;UBERON:0003295,7.71e-17,4;UBERON:0005562,7.71e-17,4;UBERON:0000178,1.10e-11,15;UBERON:0000179,1.10e-11,15;UBERON:0000463,1.10e-11,15;UBERON:0003351,2.07e-11,6;UBERON:0004177,7.50e-10,7;UBERON:0005057,7.50e-10,7;UBERON:0000029,1.27e-08,1;UBERON:0000974,4.95e-07,10;UBERON:0003408,4.95e-07,10;UBERON:0001042,4.95e-07,10;UBERON:0009145,4.95e-07,10 | |||
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| ||
|short_description=p@chr2:43359692..43359706,- | |short_description=p@chr2:43359692..43359706,- | ||
}} | }} |
Latest revision as of 10:14, 29 July 2015
Short description: | p@chr2:43359692..43359706, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43359692..43359706, - |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.35e-52 | 11 |
mature alpha-beta T cell | 1.35e-38 | 18 |
alpha-beta T cell | 1.35e-38 | 18 |
immature T cell | 1.35e-38 | 18 |
mature T cell | 1.35e-38 | 18 |
immature alpha-beta T cell | 1.35e-38 | 18 |
T cell | 4.41e-33 | 25 |
pro-T cell | 4.41e-33 | 25 |
lymphoid lineage restricted progenitor cell | 6.54e-15 | 52 |
lymphocyte | 1.36e-14 | 53 |
common lymphoid progenitor | 1.36e-14 | 53 |
single nucleate cell | 1.11e-10 | 3 |
mononuclear cell | 1.11e-10 | 3 |
innate effector T cell | 3.79e-08 | 1 |
immature NK T cell | 3.79e-08 | 1 |
effector T cell | 3.79e-08 | 1 |
mature NK T cell | 3.79e-08 | 1 |
immature NK T cell stage IV | 3.79e-08 | 1 |
immature NK T cell stage I | 3.79e-08 | 1 |
immature NK T cell stage II | 3.79e-08 | 1 |
immature NK T cell stage III | 3.79e-08 | 1 |
nongranular leukocyte | 4.01e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.71e-17 | 4 |
hemolymphoid system gland | 7.71e-17 | 4 |
thymic region | 7.71e-17 | 4 |
pharyngeal gland | 7.71e-17 | 4 |
thymus primordium | 7.71e-17 | 4 |
blood | 1.10e-11 | 15 |
haemolymphatic fluid | 1.10e-11 | 15 |
organism substance | 1.10e-11 | 15 |
pharyngeal epithelium | 2.07e-11 | 6 |
hemopoietic organ | 7.50e-10 | 7 |
immune organ | 7.50e-10 | 7 |
lymph node | 1.27e-08 | 1 |
neck | 4.95e-07 | 10 |
gland of gut | 4.95e-07 | 10 |
chordate pharynx | 4.95e-07 | 10 |
pharyngeal region of foregut | 4.95e-07 | 10 |