FFCP PHASE1:Hg19::chr2:56102173..56102210,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:56102173..56102210,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56102173..56102210,- | |||
|id=chr2:56102173..56102210,- | |||
|ontology_enrichment_celltype=CL:0000222!1.28e-18!119;CL:0000213!1.92e-15!57;CL:0000215!1.92e-15!57;CL:0002139!2.74e-15!24;CL:0002078!1.47e-11!44;CL:0000115!1.28e-10!35;CL:0000071!1.55e-10!18;CL:0002546!1.55e-10!18;CL:0000220!1.63e-09!246;CL:0002321!1.67e-09!248;CL:0000057!7.13e-09!75;CL:0000055!1.00e-08!180;CL:1000413!4.90e-08!9;CL:0000076!4.36e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.94e-21;24!CL:0000115;5.89e-14;36!CL:0002078;1.92e-13;45!CL:0002138;7.00e-13;6!CL:0000213;5.47e-12;58!CL:0000215;5.47e-12;58!CL:0000071;7.96e-12;18!CL:1000413;1.89e-10;9!CL:0000153;1.03e-08;9!CL:0000447;1.03e-08;9!CL:0002494;3.28e-08;16!CL:0002548;6.30e-08;6!CL:0000135;3.17e-07;3!CL:0000388;3.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.15e-23,58;CL:0000215,6.15e-23,58;CL:0002139,6.83e-22,24;CL:0000222,2.59e-19,121;CL:0002078,2.95e-17,45;CL:0000115,1.38e-16,36;CL:0005020,6.54e-13,6;CL:0002138,6.54e-13,6;CL:0005022,6.54e-13,6;CL:0000057,1.81e-12,76;CL:0000071,3.47e-12,18;CL:0002546,3.47e-12,18;CL:1000413,9.06e-11,9;CL:0000153,1.09e-08,9;CL:0000447,1.09e-08,9;CL:0002494,2.20e-08,16;CL:0002548,3.21e-08,6;CL:0002321,9.95e-08,250;CL:0000135,2.75e-07,3;CL:0000388,2.75e-07,3;CL:0000076,4.67e-07,63;CL:0002580,9.67e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;7.00e-13;6!CL:0002546;7.96e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.94e-18!84;UBERON:0002049!4.59e-18!79;UBERON:0007798!4.59e-18!79;UBERON:0000055!1.11e-17!69;UBERON:0001009!8.47e-17!113;UBERON:0004535!1.28e-16!110;UBERON:0000477!5.52e-16!286;UBERON:0001981!2.60e-15!60;UBERON:0007500!2.60e-15!60;UBERON:0004537!2.60e-15!60;UBERON:0006965!2.60e-15!60;UBERON:0003914!4.44e-15!118;UBERON:0001637!6.85e-15!42;UBERON:0003509!6.85e-15!42;UBERON:0004572!6.85e-15!42;UBERON:0004111!1.22e-13!241;UBERON:0004573!4.18e-11!33;UBERON:0004571!4.18e-11!33;UBERON:0000025!9.55e-11!194;UBERON:0001986!1.55e-10!18;UBERON:0004638!1.55e-10!18;UBERON:0004852!1.55e-10!18;UBERON:0000483!2.33e-10!309;UBERON:0000119!3.76e-10!312;UBERON:0000490!6.29e-10!138;UBERON:0006914!1.49e-09!25;UBERON:0000947!1.83e-09!21;UBERON:0010191!1.83e-09!21;UBERON:0000487!1.03e-08!22;UBERON:0000468!4.73e-08!659;UBERON:0003915!4.90e-08!9;UBERON:0004700!4.90e-08!9;UBERON:0001917!4.90e-08!9;UBERON:0000467!1.82e-07!625;UBERON:0000480!2.34e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;3.04e-13;25!UBERON:0004638;7.96e-12;18!UBERON:0001986;7.96e-12;18!UBERON:0004852;7.96e-12;18!UBERON:0000487;6.71e-11;22!UBERON:0003915;1.89e-10;9!UBERON:0004700;1.89e-10;9!UBERON:0001917;1.89e-10;9!UBERON:0001637;9.61e-10;42!UBERON:0003509;9.61e-10;42!UBERON:0004572;9.61e-10;42!UBERON:0001473;2.04e-09;8!UBERON:0004536;2.04e-09;8!UBERON:0006558;2.04e-09;8!UBERON:0000490;2.06e-09;33!UBERON:0000055;2.11e-09;65!UBERON:0004457;1.12e-07;9!UBERON:0000042;1.12e-07;9!UBERON:0002049;1.25e-07;75!UBERON:0007798;1.25e-07;75!UBERON:0000947;1.40e-07;21!UBERON:0010191;1.40e-07;21!UBERON:0002465;2.41e-07;10!UBERON:0007846;3.17e-07;3!UBERON:0000043;3.17e-07;3!UBERON:0007845;3.17e-07;3!UBERON:0004573;4.18e-07;33!UBERON:0004571;4.18e-07;33!UBERON:0007500;8.39e-07;56!UBERON:0001981;8.39e-07;56!UBERON:0004537;8.39e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.29e-17,109;UBERON:0001009,7.63e-17,112;UBERON:0000055,2.88e-16,68;UBERON:0004872,4.72e-16,83;UBERON:0002049,1.49e-15,78;UBERON:0007798,1.49e-15,78;UBERON:0003914,4.81e-14,117;UBERON:0006914,1.25e-13,25;UBERON:0004638,3.47e-12,18;UBERON:0001986,3.47e-12,18;UBERON:0004852,3.47e-12,18;UBERON:0000487,2.88e-11,22;UBERON:0001637,4.15e-11,42;UBERON:0003509,4.15e-11,42;UBERON:0004572,4.15e-11,42;UBERON:0007500,5.34e-11,59;UBERON:0001981,5.34e-11,59;UBERON:0004537,5.34e-11,59;UBERON:0006965,5.34e-11,59;UBERON:0003915,9.06e-11,9;UBERON:0004700,9.06e-11,9;UBERON:0001917,9.06e-11,9;UBERON:0001473,1.94e-09,8;UBERON:0004536,1.94e-09,8;UBERON:0006558,1.94e-09,8;UBERON:0000490,7.59e-08,148;UBERON:0000947,8.83e-08,21;UBERON:0010191,8.83e-08,21;UBERON:0000948,1.46e-07,24;UBERON:0005498,1.46e-07,24;UBERON:0004140,1.46e-07,24;UBERON:0009881,1.46e-07,24;UBERON:0004141,1.46e-07,24;UBERON:0003084,1.46e-07,24;UBERON:0007005,1.46e-07,24;UBERON:0004139,1.46e-07,24;UBERON:0004291,1.46e-07,24;UBERON:0004573,1.76e-07,33;UBERON:0004571,1.76e-07,33;UBERON:0002465,2.32e-07,10;UBERON:0007846,2.75e-07,3;UBERON:0000043,2.75e-07,3;UBERON:0007845,2.75e-07,3;UBERON:0004111,7.96e-07,240 | |||
|phase1_expression=1.09007027562334,2.5692062866918,2.25527046553554,1.0007329835313,0.893922188854576,2.61701557230111,0,0,0.783556884599516,0,0,0.218441372130172,0,0.37129905888014,1.32558950291166,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.4471672733735,1.34140171940727,1.15076305659177,4.69870898099936,3.00802746381534,9.99440980829684,0,2.43317435151318,0.472674085820339,0,0.614843499851882,0,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.73570250803797,2.82653970962005,2.51699661725944,3.02629846134074,2.92592953151535,1.55050055501597,2.13459757612026,4.35136796594071,0.805658634218294,5.32190474002959,4.63717909341522,1.83831540172934,4.0507097394088,3.12549048994279,0.898117490504679,0.900891843866578,0,0,1.83201743930407,0,0,0.436094052142534,3.97577561356255,1.8994576749687,0.926864265692532,10.0392817262085,2.12801029319014,1.68203280042692,0,2.96001058100592,1.24484414159907,1.88594940897563,2.61539044981534,0.454072282934794,1.15235184896,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,2.94923676216055,1.07633781413317,2.56268866582281,2.33125091275518,0.900273288253207,1.03052529238439,0.257640540045629,0,0.337552664482532,0.487185025805993,1.00973509697646,0.920498986422993,1.61646056818812,1.42003837006646,0.705264687593482,0,0.193260853163297,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.337169380156203,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0,0.325808305310325,0,1.44331342025273,0,0.352226082707465,3.46479474626577,9.72269576410883,7.22965778491473,0,0,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.857867961948885,0.542621605391443,0,0,1.06617584622764,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0,2.28767947683888,1.07057393278297,0.630809660135739,0.702848489956279,0,0,2.0694614258501,0.664225598535437,0,0.434418072340414,0,0,0,0,0,0,0,0,1.48864684691266,1.68808170616869,4.2099014164961,0.640695746278505,1.02341449813341,1.12597744800525,4.45254199334973,0,0,0.0821271560138091,0,0,0,1.00253235151642,0.368323955743585,0.459257792658427,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.510281115829547,1.94324324491925,3.08454505380579,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0,0.178064071293475,0.330569830721956,0.768760269460425,0.255225424989168,0.2023155617111,0.929691098594572,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0,0,3.24071329670502,0,1.28381696410176,0.636406495851874,0.78494864019923,0.899362287916574,1.37268514868027,1.17812402345686,0.202182481573316,0,0.421258456238981,0,2.19342140668156,0,0,0.848432591722276,1.13008116620243,0,1.99031692572366,2.63070531152258,0.578775534266688,0,0,0.92947049429925,0.563391205064483,0,0.392996164052485,0.35667105148125,0,12.4553504825622,10.5374365747169,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.470719003883896,0,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.921482106297696,0,0.140669416410513,0.445234820091624,0,0,3.38721580026819,0.828851746593443,0,0.613612095012929,0,0.933118762985422,0.179736702294654,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,0,0.568967241427498,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.221158519862449,0.295547618953547,0,0,1.39423744278603,0.307801034015188,0.683652335082007,0,0,0,0.957003479195758,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.937057782901357,0,0,0,0.789168805698781,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,1.57254001417827,0,0,0,0.0821154570532092,0.193978032976839,0,0.677942222341597,0.685209623233754,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.707082103850386,0,0,0,0,0.600420288709789,0.136905378891993,0,1.71906176567983,0,0.558564802544508,0,0,0.399358000997982,0.429226048136571,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,1.43429871466276,0,0.714695326373367,0.662091970365432,0,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,0.258565912723101,0,0,0,0.533937062838473,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0,1.14681839138014,0.33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| |||
|short_description=p@chr2:56102173..56102210,- | |||
}} |
Latest revision as of 11:00, 29 July 2015
Short description: | p@chr2:56102173..56102210, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56102173..56102210, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.15e-23 | 58 |
barrier cell | 6.15e-23 | 58 |
endothelial cell of vascular tree | 6.83e-22 | 24 |
mesodermal cell | 2.59e-19 | 121 |
meso-epithelial cell | 2.95e-17 | 45 |
endothelial cell | 1.38e-16 | 36 |
lymphangioblast | 6.54e-13 | 6 |
endothelial cell of lymphatic vessel | 6.54e-13 | 6 |
vascular lymphangioblast | 6.54e-13 | 6 |
fibroblast | 1.81e-12 | 76 |
blood vessel endothelial cell | 3.47e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.47e-12 | 18 |
endothelial cell of artery | 9.06e-11 | 9 |
GAG secreting cell | 1.09e-08 | 9 |
carbohydrate secreting cell | 1.09e-08 | 9 |
cardiocyte | 2.20e-08 | 16 |
cardiac fibroblast | 3.21e-08 | 6 |
embryonic cell | 9.95e-08 | 250 |
fibrocyte | 2.75e-07 | 3 |
tendon cell | 2.75e-07 | 3 |
squamous epithelial cell | 4.67e-07 | 63 |
preadipocyte of the breast | 9.67e-07 | 3 |