FFCP PHASE1:Hg19::chr2:56104927..56104972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56104927..56104972,+ | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56104927..56104972,+ | |description=CAGE_peak_at_chr2:56104927..56104972,+ | ||
|id=chr2:56104927..56104972,+ | |id=chr2:56104927..56104972,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.79e-22!119;CL:0002139!4.14e-18!24;CL:0000213!1.42e-17!57;CL:0000215!1.42e-17!57;CL:0000055!1.06e-13!180;CL:0002078!1.83e-13!44;CL:0000220!2.79e-13!246;CL:0002321!6.38e-13!248;CL:0000071!6.41e-13!18;CL:0002546!6.41e-13!18;CL:0000057!8.23e-13!75;CL:0000115!7.78e-12!35;CL:0000076!6.64e-10!62;CL:0002620!7.64e-09!23;CL:0000187!6.39e-07!54;CL:0005020!7.65e-07!6;CL:0002138!7.65e-07!6;CL:0005022!7.65e-07!6 | |ontology_enrichment_celltype=CL:0000222!4.79e-22!119;CL:0002139!4.14e-18!24;CL:0000213!1.42e-17!57;CL:0000215!1.42e-17!57;CL:0000055!1.06e-13!180;CL:0002078!1.83e-13!44;CL:0000220!2.79e-13!246;CL:0002321!6.38e-13!248;CL:0000071!6.41e-13!18;CL:0002546!6.41e-13!18;CL:0000057!8.23e-13!75;CL:0000115!7.78e-12!35;CL:0000076!6.64e-10!62;CL:0002620!7.64e-09!23;CL:0000187!6.39e-07!54;CL:0005020!7.65e-07!6;CL:0002138!7.65e-07!6;CL:0005022!7.65e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.90e-25;24!CL:0002138;2.03e-16;6!CL:0000115;1.56e-14;36!CL:0002078;4.05e-14;45!CL:0000213;9.10e-14;58!CL:0000215;9.10e-14;58!CL:0000071;5.78e-13;18!CL:0000153;1.75e-11;9!CL:0000447;1.75e-11;9!CL:0000135;1.34e-09;3!CL:0000388;1.34e-09;3!CL:0002494;2.50e-09;16!CL:0002144;7.60e-09;3!CL:0000327;1.37e-08;15!CL:0000746;1.67e-08;3!CL:0000499;2.08e-08;28!CL:0000138;5.09e-08;6!CL:0002548;2.06e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.34e-24,24;CL:0000213,2.48e-22,58;CL:0000215,2.48e-22,58;CL:0000222,4.80e-19,121;CL:0002078,9.49e-19,45;CL:0000115,4.12e-17,36;CL:0005020,6.20e-16,6;CL:0002138,6.20e-16,6;CL:0005022,6.20e-16,6;CL:0000071,8.84e-13,18;CL:0002546,8.84e-13,18;CL:0000153,1.16e-11,9;CL:0000447,1.16e-11,9;CL:0000057,2.03e-11,76;CL:0000135,1.28e-09,3;CL:0000388,1.28e-09,3;CL:0002494,2.26e-09,16;CL:0002144,7.07e-09,3;CL:0000327,9.89e-09,15;CL:0000499,1.61e-08,28;CL:0000746,1.70e-08,3;CL:0000513,1.70e-08,3;CL:0000058,3.38e-08,6;CL:0000138,3.38e-08,6;CL:0002548,1.56e-07,6;CL:0000076,6.83e-07,63;CL:0002321,9.20e-07,250 | |||
|ontology_enrichment_development_v019=CL:0005022;2.03e-16;6!CL:0002546;5.78e-13;18!CL:0000513;1.67e-08;3!CL:0000222;6.49e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.30e-21!79;UBERON:0007798!2.30e-21!79;UBERON:0000055!1.82e-20!69;UBERON:0004872!1.83e-20!84;UBERON:0004535!6.54e-19!110;UBERON:0001009!8.70e-18!113;UBERON:0001981!9.59e-18!60;UBERON:0007500!9.59e-18!60;UBERON:0004537!9.59e-18!60;UBERON:0006965!9.59e-18!60;UBERON:0006914!2.03e-14!25;UBERON:0000477!1.55e-13!286;UBERON:0003914!3.58e-13!118;UBERON:0001986!6.41e-13!18;UBERON:0004638!6.41e-13!18;UBERON:0004852!6.41e-13!18;UBERON:0000487!2.72e-12!22;UBERON:0001637!1.42e-11!42;UBERON:0003509!1.42e-11!42;UBERON:0004572!1.42e-11!42;UBERON:0004111!3.11e-11!241;UBERON:0000490!1.73e-10!138;UBERON:0000483!4.24e-10!309;UBERON:0000119!5.52e-10!312;UBERON:0000025!6.03e-09!194;UBERON:0000467!5.86e-07!625;UBERON:0004573!6.52e-07!33;UBERON:0004571!6.52e-07!33;UBERON:0000480!7.23e-07!626 | |ontology_enrichment_uberon=UBERON:0002049!2.30e-21!79;UBERON:0007798!2.30e-21!79;UBERON:0000055!1.82e-20!69;UBERON:0004872!1.83e-20!84;UBERON:0004535!6.54e-19!110;UBERON:0001009!8.70e-18!113;UBERON:0001981!9.59e-18!60;UBERON:0007500!9.59e-18!60;UBERON:0004537!9.59e-18!60;UBERON:0006965!9.59e-18!60;UBERON:0006914!2.03e-14!25;UBERON:0000477!1.55e-13!286;UBERON:0003914!3.58e-13!118;UBERON:0001986!6.41e-13!18;UBERON:0004638!6.41e-13!18;UBERON:0004852!6.41e-13!18;UBERON:0000487!2.72e-12!22;UBERON:0001637!1.42e-11!42;UBERON:0003509!1.42e-11!42;UBERON:0004572!1.42e-11!42;UBERON:0004111!3.11e-11!241;UBERON:0000490!1.73e-10!138;UBERON:0000483!4.24e-10!309;UBERON:0000119!5.52e-10!312;UBERON:0000025!6.03e-09!194;UBERON:0000467!5.86e-07!625;UBERON:0004573!6.52e-07!33;UBERON:0004571!6.52e-07!33;UBERON:0000480!7.23e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0006914;1.70e-15;25!UBERON:0004638;5.78e-13;18!UBERON:0001986;5.78e-13;18!UBERON:0004852;5.78e-13;18!UBERON:0000487;2.29e-12;22!UBERON:0001473;4.07e-12;8!UBERON:0004536;4.07e-12;8!UBERON:0006558;4.07e-12;8!UBERON:0000055;9.73e-11;65!UBERON:0002049;4.19e-10;75!UBERON:0007798;4.19e-10;75!UBERON:0007846;1.34e-09;3!UBERON:0000043;1.34e-09;3!UBERON:0007845;1.34e-09;3!UBERON:0002465;1.55e-09;10!UBERON:0010523;7.60e-09;3!UBERON:0001915;7.60e-09;3!UBERON:0001982;7.60e-09;3!UBERON:0007500;5.11e-08;56!UBERON:0001981;5.11e-08;56!UBERON:0004537;5.11e-08;56!UBERON:0001637;5.82e-08;42!UBERON:0003509;5.82e-08;42!UBERON:0004572;5.82e-08;42!UBERON:0004535;1.03e-07;109!UBERON:0004457;1.87e-07;9!UBERON:0000042;1.87e-07;9!UBERON:0005406;4.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.43e-20,109;UBERON:0001009,9.07e-20,112;UBERON:0000055,1.84e-19,68;UBERON:0004872,5.39e-19,83;UBERON:0002049,1.09e-17,78;UBERON:0007798,1.09e-17,78;UBERON:0006914,2.21e-15,25;UBERON:0003914,2.28e-13,117;UBERON:0004638,8.84e-13,18;UBERON:0001986,8.84e-13,18;UBERON:0004852,8.84e-13,18;UBERON:0007500,9.33e-13,59;UBERON:0001981,9.33e-13,59;UBERON:0004537,9.33e-13,59;UBERON:0006965,9.33e-13,59;UBERON:0000487,2.92e-12,22;UBERON:0001473,9.21e-12,8;UBERON:0004536,9.21e-12,8;UBERON:0006558,9.21e-12,8;UBERON:0007846,1.28e-09,3;UBERON:0000043,1.28e-09,3;UBERON:0007845,1.28e-09,3;UBERON:0002465,2.94e-09,10;UBERON:0001637,4.20e-09,42;UBERON:0003509,4.20e-09,42;UBERON:0004572,4.20e-09,42;UBERON:0000948,4.65e-09,24;UBERON:0005498,4.65e-09,24;UBERON:0004140,4.65e-09,24;UBERON:0009881,4.65e-09,24;UBERON:0004141,4.65e-09,24;UBERON:0003084,4.65e-09,24;UBERON:0007005,4.65e-09,24;UBERON:0004139,4.65e-09,24;UBERON:0004291,4.65e-09,24;UBERON:0010523,7.07e-09,3;UBERON:0001915,7.07e-09,3;UBERON:0001982,7.07e-09,3;UBERON:0007100,7.86e-08,27;UBERON:0005406,4.60e-07,2 | |||
|phase1_expression=1.81678379270557,0.428201047781966,0.986680828671798,0,1.34088328328186,4.36169262050184,2.53299878168311,0,1.30592814099919,0,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.2786256184353,6.14446559053763,4.51204119572301,7.9665585428453,0,1.94653948121054,0.0945348171640679,0.886917589850256,0.966182642624386,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,3.77549492588915,0.825354125820202,1.25396979922086,1.03366703667732,1.06729878806013,2.00832367658802,1.61131726843659,2.28081631715554,2.19655851793353,1.10298924103761,2.43042584364528,0.803697554556718,0.898117490504679,1.0135033243499,1.53316637465883,0.949265659568129,2.19842092716489,0,0,0,3.47880366186723,1.13967460498122,0.926864265692532,4.30254931123221,1.06400514659507,3.36406560085384,0,1.2333377420858,0.311211035399766,1.75123873690594,2.7788523529288,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,2.38207584636044,0.717558542755448,1.92201649936711,0.635795703478686,0.900273288253207,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,2.52433774244115,1.38074847963449,0.646584227275248,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.201057944823262,0.185176890317059,0,0,0,0.115930404975077,0.117408694235822,2.30986316417718,4.62985512576611,5.89787871927255,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,1.28680194292333,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.66376689224646,0,0.946214490203608,0.819989904948992,0,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.496215615637554,1.2276957863045,2.52594084989766,0.640695746278505,1.02341449813341,1.12597744800525,4.45254199334973,0,0,0,0,0,0,0,0.184161977871793,0.68888668898764,0,0.393373244878272,0,0,0,0,0,0,0.680374821106063,0.431831832204279,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0.322260734604821,0.145016693914229,0,0.178064071293475,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0,3.8126038784765,0,0,0,0,0.179872457583315,1.09814811894422,0.353437207037059,0.202182481573316,0,0,0.48763373908959,2.68084838594413,0,0,0.989838023675989,1.13008116620243,0.551365343546124,2.65375590096488,2.19225442626881,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0.785992328104969,0.35667105148125,0,14.7775344708365,14.4889752902357,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.614321404198464,0,0,0,0,0,1.59398390600856,0,0,0.613612095012929,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.341380344856499,0.508507300585533,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0.975966209950223,0,0.455768223388005,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.789168805698781,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.0969890164884194,0,0.677942222341597,1.78154502040776,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,1.28929632425987,0,0.558564802544508,0.229160424011684,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0.499921631848426,0,0,0,0,0,0,0.701139929541673,1.66441758450784,0.568209015825267,1.50940741051545,0,0.228840068396924,1.20984739010591,0,0.443565449968902,0,0,0,0,0.53168342911599,0,0.450772826991655,0.380805212168795,0,0,0.214821114084977,0,0,0,0.343395705182793,0.336749488765919,0,0,0.428883182749851,0.260994291965212,0.453411851024545,1.15761237161917,1.46842022703881,0.537266523244462,5.24962460173653,1.09642024789354,0.530067437837643,0.1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| ||
|short_description=p@chr2:56104927..56104972,+ | |short_description=p@chr2:56104927..56104972,+ | ||
}} | }} |
Latest revision as of 11:00, 29 July 2015
Short description: | p@chr2:56104927..56104972, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56104927..56104972, + |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.34e-24 | 24 |
lining cell | 2.48e-22 | 58 |
barrier cell | 2.48e-22 | 58 |
mesodermal cell | 4.80e-19 | 121 |
meso-epithelial cell | 9.49e-19 | 45 |
endothelial cell | 4.12e-17 | 36 |
lymphangioblast | 6.20e-16 | 6 |
endothelial cell of lymphatic vessel | 6.20e-16 | 6 |
vascular lymphangioblast | 6.20e-16 | 6 |
blood vessel endothelial cell | 8.84e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.84e-13 | 18 |
GAG secreting cell | 1.16e-11 | 9 |
carbohydrate secreting cell | 1.16e-11 | 9 |
fibroblast | 2.03e-11 | 76 |
fibrocyte | 1.28e-09 | 3 |
tendon cell | 1.28e-09 | 3 |
cardiocyte | 2.26e-09 | 16 |
capillary endothelial cell | 7.07e-09 | 3 |
extracellular matrix secreting cell | 9.89e-09 | 15 |
stromal cell | 1.61e-08 | 28 |
cardiac muscle cell | 1.70e-08 | 3 |
cardiac muscle myoblast | 1.70e-08 | 3 |
chondroblast | 3.38e-08 | 6 |
chondrocyte | 3.38e-08 | 6 |
cardiac fibroblast | 1.56e-07 | 6 |
squamous epithelial cell | 6.83e-07 | 63 |
embryonic cell | 9.20e-07 | 250 |