FFCP PHASE1:Hg19::chr2:56144922..56144937,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:56144922..56144937,+ | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56144922..56144937,+ | |||
|id=chr2:56144922..56144937,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.53e-17!24;CL:0000222!2.93e-16!119;CL:0000213!3.58e-16!57;CL:0000215!3.58e-16!57;CL:0000057!3.49e-12!75;CL:0002078!8.81e-12!44;CL:0000071!9.81e-12!18;CL:0002546!9.81e-12!18;CL:0000076!3.02e-11!62;CL:0000055!1.70e-10!180;CL:0000115!2.03e-10!35;CL:1000413!2.40e-07!9;CL:0000220!2.51e-07!246;CL:0005020!3.20e-07!6;CL:0002138!3.20e-07!6;CL:0005022!3.20e-07!6;CL:0002321!4.20e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.08e-38;24!CL:0000071;2.73e-24;18!CL:0000115;2.31e-20;36!CL:0002078;1.04e-16;45!CL:0002138;1.55e-16;6!CL:0000153;2.93e-12;9!CL:0000447;2.93e-12;9!CL:0000327;4.71e-12;15!CL:0000213;7.69e-12;58!CL:0000215;7.69e-12;58!CL:0002543;8.67e-12;6!CL:1000413;4.13e-11;9!CL:0002580;2.72e-09;3!CL:0000499;3.75e-09;28!CL:0002618;6.04e-09;3!CL:0000138;1.65e-08;6!CL:0002544;8.18e-08;6!CL:1000306;3.99e-07;4!CL:0002547;3.99e-07;4!CL:0002545;7.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.96e-38,24;CL:0000071,4.81e-24,18;CL:0002546,4.81e-24,18;CL:0000115,1.03e-23,36;CL:0002078,7.25e-23,45;CL:0000213,1.57e-22,58;CL:0000215,1.57e-22,58;CL:0005020,1.58e-16,6;CL:0002138,1.58e-16,6;CL:0005022,1.58e-16,6;CL:0000057,4.77e-14,76;CL:0000153,3.03e-12,9;CL:0000447,3.03e-12,9;CL:0000327,4.64e-12,15;CL:0002543,9.55e-12,6;CL:0000222,1.47e-11,121;CL:1000413,5.08e-11,9;CL:0002580,1.28e-09,3;CL:0000499,3.55e-09,28;CL:0002618,3.94e-09,3;CL:0000058,1.70e-08,6;CL:0000138,1.70e-08,6;CL:0000076,7.02e-08,63;CL:0002544,1.19e-07,6;CL:1000306,5.94e-07,4;CL:0002547,5.94e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;2.73e-24;18!CL:0005022;1.55e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.14e-17!79;UBERON:0007798!5.14e-17!79;UBERON:0004535!7.06e-17!110;UBERON:0001009!1.36e-16!113;UBERON:0004872!1.26e-15!84;UBERON:0000055!4.61e-15!69;UBERON:0006914!1.05e-12!25;UBERON:0001981!3.12e-12!60;UBERON:0007500!3.12e-12!60;UBERON:0004537!3.12e-12!60;UBERON:0006965!3.12e-12!60;UBERON:0001986!9.81e-12!18;UBERON:0004638!9.81e-12!18;UBERON:0004852!9.81e-12!18;UBERON:0003914!2.89e-11!118;UBERON:0000487!3.10e-10!22;UBERON:0000490!1.03e-09!138;UBERON:0001637!2.35e-08!42;UBERON:0003509!2.35e-08!42;UBERON:0004572!2.35e-08!42;UBERON:0000477!1.37e-07!286;UBERON:0000947!2.27e-07!21;UBERON:0010191!2.27e-07!21;UBERON:0003915!2.40e-07!9;UBERON:0004700!2.40e-07!9;UBERON:0001917!2.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;1.50e-26;25!UBERON:0004638;2.73e-24;18!UBERON:0001986;2.73e-24;18!UBERON:0004852;2.73e-24;18!UBERON:0000487;8.67e-23;22!UBERON:0000490;1.11e-14;33!UBERON:0001473;3.12e-12;8!UBERON:0004536;3.12e-12;8!UBERON:0006558;3.12e-12;8!UBERON:0003915;4.13e-11;9!UBERON:0004700;4.13e-11;9!UBERON:0001917;4.13e-11;9!UBERON:0000055;4.20e-10;65!UBERON:0002465;1.20e-09;10!UBERON:0002049;4.49e-09;75!UBERON:0007798;4.49e-09;75!UBERON:0001638;9.65e-08;9!UBERON:0003920;9.65e-08;9!UBERON:0004582;9.65e-08;9!UBERON:0004535;1.90e-07;109!UBERON:0000947;1.94e-07;21!UBERON:0010191;1.94e-07;21!UBERON:0007500;2.06e-07;56!UBERON:0001981;2.06e-07;56!UBERON:0004537;2.06e-07;56!UBERON:0004797;3.99e-07;4!UBERON:0000415;3.99e-07;4!UBERON:0007240;3.99e-07;4!UBERON:0005742;3.99e-07;4!UBERON:0005734;3.99e-07;4!UBERON:0004664;3.99e-07;4!UBERON:0004663;3.99e-07;4!UBERON:0005406;4.75e-07;2!UBERON:0005800;7.41e-07;2!UBERON:0001515;7.41e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006914,2.49e-26,25;UBERON:0004638,4.81e-24,18;UBERON:0001986,4.81e-24,18;UBERON:0004852,4.81e-24,18;UBERON:0000487,1.43e-22,22;UBERON:0004535,5.89e-20,109;UBERON:0002049,1.20e-19,78;UBERON:0007798,1.20e-19,78;UBERON:0001009,3.44e-19,112;UBERON:0000055,8.28e-18,68;UBERON:0004872,4.40e-15,83;UBERON:0001473,3.17e-12,8;UBERON:0004536,3.17e-12,8;UBERON:0006558,3.17e-12,8;UBERON:0007500,3.41e-11,59;UBERON:0001981,3.41e-11,59;UBERON:0004537,3.41e-11,59;UBERON:0006965,3.41e-11,59;UBERON:0003915,5.08e-11,9;UBERON:0004700,5.08e-11,9;UBERON:0001917,5.08e-11,9;UBERON:0003914,8.39e-10,117;UBERON:0002465,1.21e-09,10;UBERON:0001638,1.03e-07,9;UBERON:0003920,1.03e-07,9;UBERON:0004582,1.03e-07,9;UBERON:0000947,2.73e-07,21;UBERON:0010191,2.73e-07,21;UBERON:0005406,4.00e-07,2;UBERON:0000415,5.94e-07,4;UBERON:0007240,5.94e-07,4;UBERON:0005742,5.94e-07,4;UBERON:0005734,5.94e-07,4;UBERON:0004664,5.94e-07,4;UBERON:0004663,5.94e-07,4 | |||
|phase1_expression=1.81678379270557,0.856402095563933,0.422863212287913,1.0007329835313,0.893922188854576,5.23403114460221,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0.331397375727916,0,0,1.46062018077475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,1.79007586580942,4.69870898099936,2.00535164254356,7.38717246700201,0,1.45990461090791,0,1.33037638477538,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,1.72046919021225,1.04142150482278,0,4.61449379830897,1.6507082516404,0.626984899610432,2.06733407335463,1.06729878806013,1.33888245105868,1.20848795132744,0,4.14905497831888,1.10298924103761,2.43042584364528,1.16089646769304,1.79623498100936,1.68917220724983,3.06633274931766,0,1.09921046358244,0,0,0,1.98788780678127,1.2663051166458,1.19168262731897,3.15520282823695,0.709336764396714,1.12135520028461,0,0.49333509683432,0.311211035399766,1.48181739276657,1.14423332179421,0,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,2.26864366320042,0.717558542755448,1.70845911054854,1.27159140695737,0,0.206105058476878,0,0.37223371266318,0.506328996723799,0.292311015483596,1.26216887122057,1.28869858099219,0.161646056818812,2.4850671476163,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.482022059766964,0,0,0,0,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0.352226082707465,1.44366447761074,1.38895653772983,1.90254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.714889968290738,0,0.823240336780769,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,2.29723871668228,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,0.623912584592421,0.713715955188647,0.630809660135739,0.819989904948992,0,0,1.03473071292505,0,0,0.260650843404249,0,0,0,0,0,0,0,0,1.48864684691266,1.84154367945675,2.24528075546459,0.640695746278505,0.511707249066704,0.64341568457443,1.48418066444991,0,0.177561725313127,0,0,0.116210378459959,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.510281115829547,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,6.42735719376638,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0.929691098594572,0.94443704049192,0,0.924100740528266,0,0,0,0,0,0.632758849437452,3.43134349062885,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.974853958525138,0,0,0.282810863907425,0,0,0,0.876901770507525,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0,0.491245205065606,0,0,10.9775970354785,16.794039540955,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0.222617410045812,0,0,0.796991953004279,0,0,0.511343412510774,0,0,0.0898683511473268,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0.683652335082007,0,0,0,1.27600463892768,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.290967049465258,0,0.225980740780532,1.78154502040776,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0.859530882839914,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,2.16179930125442,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0.717149357331379,0.575745591958336,2.1440859791201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0.624902039810533,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0.378806010550178,1.25783950876288,1.77962244319307,0.457680136793847,0.604923695052956,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0.226705925512272,0.926089897295336,0.734210113519403,0.537266523244462,4.63202170741458,0.877136198314828,0.176689145945881,0,1.18259708457151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,1.59002175326709,0,0,0,1.2249819094128,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,0,0,0.857440047187092,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.215927591218621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| |||
|short_description=p@chr2:56144922..56144937,+ | |||
}} |
Latest revision as of 11:01, 29 July 2015
Short description: | p@chr2:56144922..56144937, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56144922..56144937, + |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.96e-38 | 24 |
blood vessel endothelial cell | 4.81e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.81e-24 | 18 |
endothelial cell | 1.03e-23 | 36 |
meso-epithelial cell | 7.25e-23 | 45 |
lining cell | 1.57e-22 | 58 |
barrier cell | 1.57e-22 | 58 |
lymphangioblast | 1.58e-16 | 6 |
endothelial cell of lymphatic vessel | 1.58e-16 | 6 |
vascular lymphangioblast | 1.58e-16 | 6 |
fibroblast | 4.77e-14 | 76 |
GAG secreting cell | 3.03e-12 | 9 |
carbohydrate secreting cell | 3.03e-12 | 9 |
extracellular matrix secreting cell | 4.64e-12 | 15 |
vein endothelial cell | 9.55e-12 | 6 |
mesodermal cell | 1.47e-11 | 121 |
endothelial cell of artery | 5.08e-11 | 9 |
preadipocyte of the breast | 1.28e-09 | 3 |
stromal cell | 3.55e-09 | 28 |
endothelial cell of umbilical vein | 3.94e-09 | 3 |
chondroblast | 1.70e-08 | 6 |
chondrocyte | 1.70e-08 | 6 |
squamous epithelial cell | 7.02e-08 | 63 |
aortic endothelial cell | 1.19e-07 | 6 |
fibroblast of tunica adventitia of artery | 5.94e-07 | 4 |
fibroblast of the aortic adventitia | 5.94e-07 | 4 |