FFCP PHASE1:Hg19::chr2:89157733..89157742,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-249bp_to_X96754_5end | |association_with_transcript=-249bp_to_X96754_5end | ||
|cluster_id=chr2:89157733..89157742,- | |||
|coexpression_cluster_id=C1508 | |coexpression_cluster_id=C1508 | ||
|description=CAGE_peak_3_at_X96754_5end | |description=CAGE_peak_3_at_X96754_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!6.73e-38!24;CL:0000826!6.73e-38!24;CL:0000236!5.00e-30!14;CL:0000838!1.15e-22!52;CL:0000542!3.46e-22!53;CL:0000051!3.46e-22!53;CL:0000784!9.13e-22!3;CL:0000785!1.04e-14!2;CL:0000955!1.04e-14!2;CL:0000818!1.04e-14!2;CL:0000954!1.04e-14!2;CL:0000816!1.04e-14!2;CL:0000738!1.63e-10!140;CL:0000037!2.45e-10!172;CL:0000566!2.45e-10!172;CL:0000817!4.18e-10!3;CL:0002087!1.07e-09!119;CL:0000988!1.45e-09!182;CL:0002031!3.42e-09!124;CL:0002032!2.47e-08!165;CL:0000837!2.47e-08!165;CL:0000819!2.90e-08!1;CL:0000946!3.83e-08!1;CL:0000786!3.83e-08!1;CL:0000980!3.83e-08!1 | |ontology_enrichment_celltype=CL:0000945!6.73e-38!24;CL:0000826!6.73e-38!24;CL:0000236!5.00e-30!14;CL:0000838!1.15e-22!52;CL:0000542!3.46e-22!53;CL:0000051!3.46e-22!53;CL:0000784!9.13e-22!3;CL:0000785!1.04e-14!2;CL:0000955!1.04e-14!2;CL:0000818!1.04e-14!2;CL:0000954!1.04e-14!2;CL:0000816!1.04e-14!2;CL:0000738!1.63e-10!140;CL:0000037!2.45e-10!172;CL:0000566!2.45e-10!172;CL:0000817!4.18e-10!3;CL:0002087!1.07e-09!119;CL:0000988!1.45e-09!182;CL:0002031!3.42e-09!124;CL:0002032!2.47e-08!165;CL:0000837!2.47e-08!165;CL:0000819!2.90e-08!1;CL:0000946!3.83e-08!1;CL:0000786!3.83e-08!1;CL:0000980!3.83e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000784;2.41e-66;3!CL:0000785;4.59e-23;1!CL:0000819;4.59e-23;1!CL:0000451;9.78e-19;10!CL:0000236;9.25e-16;13!CL:0000945;7.62e-09;24!CL:0000542;1.38e-08;53 | |ontology_enrichment_celltype_v019=CL:0000784;2.41e-66;3!CL:0000785;4.59e-23;1!CL:0000819;4.59e-23;1!CL:0000451;9.78e-19;10!CL:0000236;9.25e-16;13!CL:0000945;7.62e-09;24!CL:0000542;1.38e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.41e-66,3;CL:0000819,6.40e-23,1;CL:0000451,9.78e-19,10;CL:0000236,1.07e-14,14;CL:0000785,3.62e-12,2;CL:0000955,3.62e-12,2;CL:0000818,3.62e-12,2;CL:0000954,3.62e-12,2;CL:0000816,3.62e-12,2;CL:0000838,9.54e-11,52;CL:0000542,1.51e-10,53;CL:0000051,1.51e-10,53;CL:0000738,4.46e-10,136;CL:0000945,7.52e-09,24;CL:0000826,7.52e-09,24;CL:0000817,1.51e-08,3;CL:0000037,4.11e-08,168;CL:0000988,1.10e-07,177;CL:0002087,8.75e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000954;3.06e-12;2!CL:0000051;1.38e-08;53 | |ontology_enrichment_development_v019=CL:0000954;3.06e-12;2!CL:0000051;1.38e-08;53 | ||
|ontology_enrichment_disease=DOID:0060058!1.64e-23!10;DOID:2531!3.45e-09!51;DOID:0060083!3.45e-09!51;DOID:0060073!2.90e-08!1;DOID:8675!2.90e-08!1;DOID:9119!5.79e-08!1;DOID:2355!9.94e-08!1 | |ontology_enrichment_disease=DOID:0060058!1.64e-23!10;DOID:2531!3.45e-09!51;DOID:0060083!3.45e-09!51;DOID:0060073!2.90e-08!1;DOID:8675!2.90e-08!1;DOID:9119!5.79e-08!1;DOID:2355!9.94e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:0060073;4.59e-23;1!DOID:8675;4.59e-23;1!DOID:0060058;8.45e-10;10 | |ontology_enrichment_disease_v019=DOID:0060073;4.59e-23;1!DOID:8675;4.59e-23;1!DOID:0060058;8.45e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.40e-23,1;DOID:8675,6.40e-23,1;DOID:0060058,8.84e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002372!1.21e-07!1;UBERON:0001961!1.21e-07!1;UBERON:0001744!1.21e-07!1;UBERON:0001735!1.21e-07!1 | |ontology_enrichment_uberon=UBERON:0002372!1.21e-07!1;UBERON:0001961!1.21e-07!1;UBERON:0001744!1.21e-07!1;UBERON:0001735!1.21e-07!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.70692089026603,0.800791974072025,0.574752439954483,0.661044872784862,1.90810750907073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43094374583205,4.0039643754609,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,3.78907506543426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,3.16178611036711,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.70692089026603,0.800791974072025,0.574752439954483,0.661044872784862,1.90810750907073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43094374583205,4.0039643754609,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,3.78907506543426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,3.16178611036711,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@X96754 | |short_description=p3@X96754 | ||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p3@X96754 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_X96754_5end |
Coexpression cluster: | C1508_Dendritic_adult_lymphangiectasia_hairy_CD19_lymphoma_diffuse |
Association with transcript: | -249bp_to_X96754_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.41e-66 | 3 |
B-1 B cell | 6.40e-23 | 1 |
dendritic cell | 9.78e-19 | 10 |
B cell | 1.07e-14 | 14 |
mature B cell | 3.62e-12 | 2 |
pre-B-II cell | 3.62e-12 | 2 |
transitional stage B cell | 3.62e-12 | 2 |
small pre-B-II cell | 3.62e-12 | 2 |
immature B cell | 3.62e-12 | 2 |
lymphoid lineage restricted progenitor cell | 9.54e-11 | 52 |
lymphocyte | 1.51e-10 | 53 |
common lymphoid progenitor | 1.51e-10 | 53 |
leukocyte | 4.46e-10 | 136 |
lymphocyte of B lineage | 7.52e-09 | 24 |
pro-B cell | 7.52e-09 | 24 |
precursor B cell | 1.51e-08 | 3 |
hematopoietic stem cell | 4.11e-08 | 168 |
hematopoietic cell | 1.10e-07 | 177 |
nongranular leukocyte | 8.75e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.40e-23 | 1 |
lymphosarcoma | 6.40e-23 | 1 |
lymphoma | 8.84e-10 | 10 |