FFCP PHASE1:Hg19::chr3:112324173..112324209,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:112324173..112324209,-
|short_description=p@chr3:112324173..112324209,-
|description=CAGE_peak_at_chr3:112324173..112324209,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:112324173..112324209,- | |||
|coexpression_cluster_id=C401 | |||
|description=CAGE_peak_at_chr3:112324173..112324209,- | |||
|id=chr3:112324173..112324209,- | |||
|ontology_enrichment_celltype=CL:0000055!1.35e-15!180;CL:0000057!2.16e-13!75;CL:0002620!2.82e-12!23;CL:0000136!3.26e-09!15;CL:0000680!1.19e-07!57;CL:0000056!1.19e-07!57;CL:0000355!1.19e-07!57;CL:0002334!4.93e-07!12;CL:0000187!6.14e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.91e-15;23!CL:0000136;9.95e-13;13!CL:1000306;2.83e-09;4!CL:0002547;2.83e-09;4!CL:0002334;2.09e-08;12!CL:0002579;4.24e-08;3!CL:0002615;4.97e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-17,76;CL:0002620,2.42e-15,23;CL:0000136,6.02e-11,15;CL:1000306,3.15e-09,4;CL:0002547,3.15e-09,4;CL:0000048,6.49e-09,427;CL:0000723,1.50e-08,433;CL:0002334,1.87e-08,12;CL:0002579,4.18e-08,3;CL:0000034,4.38e-08,441;CL:0002615,5.37e-08,3;CL:0002320,2.47e-07,361;CL:0000134,2.81e-07,354;CL:0002521,6.24e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.79e-11;5!DOID:450;2.79e-11;5!DOID:66;2.79e-11;5!DOID:423;2.79e-11;5!DOID:0080000;2.79e-11;5!DOID:11722;2.79e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.28e-11,5;DOID:450,4.28e-11,5;DOID:66,4.28e-11,5;DOID:423,4.28e-11,5;DOID:0080000,4.28e-11,5;DOID:11722,4.28e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.90e-11!45;UBERON:0002416!6.90e-11!45;UBERON:0001013!1.02e-09!14;UBERON:0002097!3.83e-08!40;UBERON:0002385!1.01e-07!63;UBERON:0001015!1.01e-07!63;UBERON:0000383!1.01e-07!63;UBERON:0004290!1.01e-07!70;UBERON:0000914!1.51e-07!83;UBERON:0002329!1.51e-07!83;UBERON:0003077!1.51e-07!83;UBERON:0003059!1.51e-07!83;UBERON:0007282!1.51e-07!83;UBERON:0009618!1.51e-07!83;UBERON:0007285!1.51e-07!83;UBERON:0003688!1.83e-07!6;UBERON:0002358!1.83e-07!6;UBERON:0003684!1.83e-07!6;UBERON:0001178!1.83e-07!6;UBERON:0001134!2.78e-07!61;UBERON:0002036!2.78e-07!61;UBERON:0003082!2.78e-07!61;UBERON:0000486!7.67e-07!82;UBERON:0000948!8.46e-07!24;UBERON:0005498!8.46e-07!24;UBERON:0004140!8.46e-07!24;UBERON:0009881!8.46e-07!24;UBERON:0004141!8.46e-07!24;UBERON:0003084!8.46e-07!24;UBERON:0007005!8.46e-07!24;UBERON:0004139!8.46e-07!24;UBERON:0004291!8.46e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.79e-16;9!UBERON:0000042;4.79e-16;9!UBERON:0003688;1.88e-14;6!UBERON:0002358;1.88e-14;6!UBERON:0003684;1.88e-14;6!UBERON:0001178;1.88e-14;6!UBERON:0002199;5.39e-12;46!UBERON:0002416;5.39e-12;46!UBERON:0001013;7.13e-11;14!UBERON:0002097;5.24e-10;41!UBERON:0004797;2.83e-09;4!UBERON:0000415;2.83e-09;4!UBERON:0007240;2.83e-09;4!UBERON:0005742;2.83e-09;4!UBERON:0005734;2.83e-09;4!UBERON:0004664;2.83e-09;4!UBERON:0004663;2.83e-09;4!UBERON:0003102;1.25e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.16e-16,46;UBERON:0002416,1.16e-16,46;UBERON:0003688,2.00e-14,6;UBERON:0002358,2.00e-14,6;UBERON:0003684,2.00e-14,6;UBERON:0001178,2.00e-14,6;UBERON:0002097,1.69e-12,41;UBERON:0004457,1.64e-11,12;UBERON:0000042,1.64e-11,12;UBERON:0001013,4.32e-11,14;UBERON:0004797,2.94e-10,7;UBERON:0000415,3.15e-09,4;UBERON:0007240,3.15e-09,4;UBERON:0005742,3.15e-09,4;UBERON:0005734,3.15e-09,4;UBERON:0004664,3.15e-09,4;UBERON:0004663,3.15e-09,4;UBERON:0002384,2.88e-08,371;UBERON:0003102,3.41e-08,99;UBERON:0002190,6.24e-07,3;UBERON:0002072,9.00e-07,5 | |||
|phase1_expression=3.81524596468169,7.06531728840244,8.17535543756633,4.00293193412522,4.46961094427288,17.4467704820074,2.53299878168311,1.89515962028049,1.82829939739887,0,0,1.74753097704138,0,0.495065411840187,1.65698687863958,1.34465029290355,0,0,0,0.492484232307152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,58.5136479153508,0,1.15076305659177,5.06014813338393,2.50668955317945,3.18662341713812,0,0.973269740605272,0,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,6.46063537203914,3.29239330327907,1.45650098894541,13.1944845544454,2.12801029319014,2.24271040056923,1.06748995729705,0.74000264525148,0.311211035399766,0,0,0.756787138224657,0,0,0,0.570471821544449,0.298897361103602,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,1.22595118319608,0,0.226864366320042,4.66413052791041,3.20336083227851,3.60284231971255,3.30100205692843,1.03052529238439,2.31876486041066,2.23340227597908,2.53164498361899,1.07180705677318,4.54380793639406,5.79914361446486,0.484938170456436,8.87523981291536,1.81353776809752,1.52604533079439,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,1.42198887333556,3.57656445851882,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.299918973546171,0,0,0,0.479249710983165,1.14861935834114,0,2.75084482668401,0,1.96967059563885,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.981531933753119,0.500170521059677,0,0.415941723061614,0.713715955188647,0.473107245101804,1.28855556491985,0.300946099727719,0,0,1.32845119707087,0.368738337083406,0.521301686808497,0.195801157462741,0,0,0,0,0.303127571446259,8.32177197552485,0.604780586659361,4.46594054073798,0.920771839728375,1.68396056659844,17.0425068510082,3.58195074346692,10.2946509531909,4.45254199334973,0.462629081407967,1.24293207719189,0.328508624055237,0,0,0,0,0,1.03333003348146,0.728364672026868,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0.15350367472613,0.413509717453592,0.322260734604821,0.435050081742686,0.255679882248303,0.623224249527161,0,0.192190067365106,0.127612712494584,0,1.85938219718914,11.333244485903,0.6970372701606,0,0,0.869932992075073,1.11194531462352,0.572499546967965,0,1.58189712359363,0.190630193923825,0.767693373934002,1.28381696410176,0,0,0.719489830333259,0.274537029736055,0.235624804691373,0.606547444719948,0,0,0,0.243713489631284,0,1.09199929126389,0.989838023675989,2.26016233240486,0.551365343546124,0,0.876901770507525,0,0,0.202910376962704,0,0,0.286822704408103,0.294747123039363,0,0.354761064070598,2.11107635297664,3.29294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0.593929361665277,1.84296421259539,0,0,0.111308705022906,0,0,0.398495976502139,0.276283915531148,0,0,0,4.3545542272653,0,0,0,0.690503839458535,0,0,0,0,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,2.40773294189637,0,0,0,0,0.394584402849391,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,1.39781334593624,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0,0,0,0.240476460754601,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0,0,1.11712960508902,1.14580212005842,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,4.2881719582402,0,0,1.62899880526114,0.864221491201268,0.979762080328227,0,0,2.89659637035217,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0.638341257770182,0,0.7520696820681,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,1.64180283175561,1.16856654923612,3.88364103051829,0,1.0062716070103,0.889811221596536,0.915360273587694,3.02461847526478,0.15543720058278,0.591420599958536,0.159296767163702,0,0.621051827505038,1.24411862352257,1.06336685823198,0,0.300515217994437,2.28483127301277,0.813741466409323,0,0.322231671127465,0.928067519756987,1.19428766609585,1.20008329398946,0.686791410365586,0.336749488765919,0,0,0,0,0.906823702049089,0.231522474323834,0.244736704506468,0.179088841081487,0,1.97355644620836,0,0.771656153083659,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0.567515953566836,0,0,0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| ||
|short_description=p@chr3:112324173..112324209,- | |||
}} | }} |
Latest revision as of 14:17, 29 July 2015
Short description: | p@chr3:112324173..112324209, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112324173..112324209, - |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-17 | 76 |
skin fibroblast | 2.42e-15 | 23 |
fat cell | 6.02e-11 | 15 |
fibroblast of tunica adventitia of artery | 3.15e-09 | 4 |
fibroblast of the aortic adventitia | 3.15e-09 | 4 |
multi fate stem cell | 6.49e-09 | 427 |
somatic stem cell | 1.50e-08 | 433 |
preadipocyte | 1.87e-08 | 12 |
omentum preadipocyte | 4.18e-08 | 3 |
stem cell | 4.38e-08 | 441 |
adipocyte of omentum tissue | 5.37e-08 | 3 |
connective tissue cell | 2.47e-07 | 361 |
mesenchymal cell | 2.81e-07 | 354 |
subcutaneous fat cell | 6.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 1.16e-16 | 46 |
integumental system | 1.16e-16 | 46 |
omentum | 2.00e-14 | 6 |
peritoneum | 2.00e-14 | 6 |
abdominal cavity | 2.00e-14 | 6 |
visceral peritoneum | 2.00e-14 | 6 |
skin of body | 1.69e-12 | 41 |
cavity lining | 1.64e-11 | 12 |
serous membrane | 1.64e-11 | 12 |
adipose tissue | 4.32e-11 | 14 |
blood vessel layer | 2.94e-10 | 7 |
artery wall | 3.15e-09 | 4 |
tunica adventitia of artery | 3.15e-09 | 4 |
adventitia | 3.15e-09 | 4 |
tunica adventitia of blood vessel | 3.15e-09 | 4 |
aorta tunica adventitia | 3.15e-09 | 4 |
aorta wall | 3.15e-09 | 4 |
connective tissue | 2.88e-08 | 371 |
surface structure | 3.41e-08 | 99 |
subcutaneous adipose tissue | 6.24e-07 | 3 |
hypodermis | 9.00e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.28e-11 | 5 |
myotonic disease | 4.28e-11 | 5 |
muscle tissue disease | 4.28e-11 | 5 |
myopathy | 4.28e-11 | 5 |
muscular disease | 4.28e-11 | 5 |
myotonic dystrophy | 4.28e-11 | 5 |