FFCP PHASE1:Hg19::chr3:123376175..123376189,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:123376175..123376189,- | |||
|description=CAGE_peak_at_chr3:123376175..123376189,- | |description=CAGE_peak_at_chr3:123376175..123376189,- | ||
|id=chr3:123376175..123376189,- | |id=chr3:123376175..123376189,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002622;9.05e-10;3 | |ontology_enrichment_celltype_v019=CL:0002622;9.05e-10;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002622,1.04e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.23e-07;2 | |ontology_enrichment_development_v019=UBERON:0007297;9.23e-07;2 | ||
|ontology_enrichment_disease=DOID:2394!3.10e-07!14 | |ontology_enrichment_disease=DOID:2394!3.10e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.73e-10;3!DOID:127;3.73e-10;3!DOID:17;5.55e-09;5!DOID:450;5.55e-09;5!DOID:66;5.55e-09;5!DOID:423;5.55e-09;5!DOID:0080000;5.55e-09;5!DOID:11722;5.55e-09;5!DOID:0060072;1.08e-07;4 | |ontology_enrichment_disease_v019=DOID:0060084;3.73e-10;3!DOID:127;3.73e-10;3!DOID:17;5.55e-09;5!DOID:450;5.55e-09;5!DOID:66;5.55e-09;5!DOID:423;5.55e-09;5!DOID:0080000;5.55e-09;5!DOID:11722;5.55e-09;5!DOID:0060072;1.08e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.71e-10,3;DOID:127,4.71e-10,3;DOID:17,3.04e-09,5;DOID:450,3.04e-09,5;DOID:66,3.04e-09,5;DOID:423,3.04e-09,5;DOID:0080000,3.04e-09,5;DOID:11722,3.04e-09,5;DOID:0060072,1.28e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005156!6.04e-07!59;UBERON:0000990!6.04e-07!59 | |ontology_enrichment_uberon=UBERON:0005156!6.04e-07!59;UBERON:0000990!6.04e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0003101;3.81e-07;22!UBERON:0000079;3.81e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0003101;3.81e-07;22!UBERON:0000079;3.81e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,4.08e-07,22;UBERON:0000079,4.08e-07,22 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.704772020479856,3.00219895059391,2.68176656656373,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0,0,0.189069634328136,0.665188192387692,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0.491337269247072,0,0,1.23633464639278,0,0,0,0,0,0,1.22595118319608,0.150238058906597,0.113432183160021,2.51145489964407,1.49490172172997,1.90738711043606,0.900273288253207,1.33968288009971,2.31876486041066,1.48893485065272,0.506328996723799,0.292311015483596,0.504867548488229,0.552299391853796,0,2.13005755509969,0.302256294682921,1.3564847384839,0,0,0,0,0,0,0,0,0,0,3.21620469096443,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0,0,1.1240175325762,0,0,0,1.03993478527958,0,0,0,0.577465791044295,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,1.690605505112,4.5209479819428,5.2003718455683,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0,2.99918973546171,0,0,0,0,1.14861935834114,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,2.99161459204025,0,0.12269149171914,0,0.542530047399471,1.24782516918484,1.24900292158013,1.10391690523754,0.819989904948992,0,0,0,0.664225598535437,0.184369168541703,1.21637060255316,0,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0.841980283299221,0.256278298511402,0,0.804269605718038,0,0.616838775210622,0.532685175939381,0,0,0,0,0,0,2.29628896329214,2.36718518408732,3.14698595902618,0,0.462092022626489,0,1.46139224653261,0.105551628892876,0,0.510281115829547,0.215915916102139,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0.984043937099117,0.650756789328606,0.206082023295445,0.0915694648183434,0.247528499761764,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0.511795582622668,1.28381696410176,0,0,0.719489830333259,0.274537029736055,0,0,0,0,0,0,0,0.682499557039929,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,3.9353685122798,0.202910376962704,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0,0,0,4.38345574152353,0.276283915531148,0,0.306806047506464,0,0.311039587661807,0,0,0,1.08507746200627,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0,0.10893846351899,0,1.38510465306835,0.227884111694002,0,0.0897576444097721,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,2.98578579323551,0.353830258013357,3.05515072466813,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,2.41981432097328,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,1.22308667769421,0,0,0,0,0.678923115418936,0,2.03382666702479,0.959293472527256,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0.271808412147228,0.313808538937,0.407992870545287,0,0,0.136905378891993,0,1.71906176567983,0,0.837847203816763,0.916641696046735,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.202210631562555,0,0,0,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0.394028536495991,0.209818352539992,0,0,0.191915197319445,0.714695326373367,0,0,2.17199840701485,5.18532894720761,4.24563568142232,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0.533937062838473,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0,0,0.221858103073705,0.124192805882767,0.138348634936231,0.249960815924213,0,0,0,0,0,0,0.701139929541673,0,0.568209015825267,1.50940741051545,0.889811221596536,0.228840068396924,0.302461847526478,0.15543720058278,0.147855149989634,0.318593534327405,0.449803112163605,0.155262956876259,0,0.265841714557995,1.5652351854352,1.20206087197775,0.380805212168795,1.22061219961398,0.363697318405119,0.214821114084977,0.464033759878494,1.19428766609585,1.60011105865261,0,0,0,0,0,1.04397716786085,1.13352962756136,0.694567422971502,0.244736704506468,4.83539870920016,3.08801447160972,0.877136198314828,0,0,0,0,0,3.3424595179512,0.414775308455192,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,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| ||
|short_description=p@chr3:123376175..123376189,- | |short_description=p@chr3:123376175..123376189,- | ||
}} | }} |
Latest revision as of 15:08, 29 July 2015
Short description: | p@chr3:123376175..123376189, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:123376175..123376189, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 1.04e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
male organism | 4.08e-07 | 22 |
male reproductive system | 4.08e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.71e-10 | 3 |
leiomyoma | 4.71e-10 | 3 |
musculoskeletal system disease | 3.04e-09 | 5 |
myotonic disease | 3.04e-09 | 5 |
muscle tissue disease | 3.04e-09 | 5 |
myopathy | 3.04e-09 | 5 |
muscular disease | 3.04e-09 | 5 |
myotonic dystrophy | 3.04e-09 | 5 |
benign neoplasm | 1.28e-07 | 4 |