FFCP PHASE1:Hg19::chr3:123452979..123452989,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:123452979..123452989,- | |||
|coexpression_cluster_id=C4275 | |||
|description=CAGE_peak_at_chr3:123452979..123452989,- | |||
|id=chr3:123452979..123452989,- | |||
|ontology_enrichment_celltype=CL:0002620!3.66e-09!23;CL:1000497!2.46e-08!18;CL:0002518!2.46e-08!18;CL:0000243!6.69e-08!15;CL:0000125!6.69e-08!15;CL:0000030!6.69e-08!15;CL:0000339!6.69e-08!15;CL:1000507!1.86e-07!12;CL:1000494!1.86e-07!12;CL:1000449!2.45e-07!16;CL:0000095!6.31e-07!17;CL:0000123!6.31e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000346;9.45e-18;3!CL:1000428;9.45e-18;3!CL:0002559;3.26e-11;5!CL:0002188;3.26e-11;5!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,8.00e-18,3;CL:1000428,8.00e-18,3;CL:0002559,2.94e-11,5;CL:0002188,3.26e-11,5;CL:1000746,2.18e-08,7;CL:1000612,2.18e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.45e-08!5;DOID:450!1.45e-08!5;DOID:66!1.45e-08!5;DOID:423!1.45e-08!5;DOID:0080000!1.45e-08!5;DOID:11722!1.45e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!1.86e-07!12;UBERON:0001231!1.86e-07!12;UBERON:0004810!1.86e-07!12;UBERON:0004211!2.45e-07!16;UBERON:0001285!2.45e-07!16;UBERON:0007684!2.45e-07!16;UBERON:0003220!2.45e-07!16;UBERON:0004208!2.45e-07!16;UBERON:0003102!3.48e-07!95;UBERON:0006555!7.77e-07!17;UBERON:0005103!7.77e-07!17;UBERON:0000083!7.77e-07!17;UBERON:0009201!7.77e-07!17;UBERON:0004819!7.77e-07!17;UBERON:0006553!7.77e-07!17;UBERON:0003074!7.77e-07!17;UBERON:0003060!7.77e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;9.45e-18;3!UBERON:0001992;9.45e-18;3!UBERON:0003343;8.81e-14;4!UBERON:0004785;8.81e-14;4!UBERON:0002073;3.26e-11;5!UBERON:0000974;1.22e-09;6!UBERON:0005910;1.44e-09;6!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0002067;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,8.00e-18,3;UBERON:0001992,8.00e-18,3;UBERON:0003343,8.82e-14,4;UBERON:0004785,8.82e-14,4;UBERON:0002073,2.94e-11,5;UBERON:0005086,2.94e-11,5;UBERON:0005910,1.57e-09,6;UBERON:0010532,2.18e-08,7;UBERON:0000074,2.18e-08,7;UBERON:0001229,2.18e-08,7;UBERON:0001230,2.18e-08,7;UBERON:0003220,2.18e-08,7;UBERON:0005749,2.18e-08,7;UBERON:0004199,2.18e-08,7;UBERON:0004209,2.18e-08,7;UBERON:0004198,2.18e-08,7;UBERON:0005103,1.69e-07,8;UBERON:0000083,1.69e-07,8;UBERON:0009201,1.69e-07,8;UBERON:0006553,1.69e-07,8;UBERON:0003074,1.69e-07,8;UBERON:0003060,1.69e-07,8;UBERON:0002067,7.91e-07,9;UBERON:0004016,7.91e-07,9;UBERON:0010083,7.91e-07,9;UBERON:0000080,8.37e-07,9;UBERON:0002120,8.37e-07,9;UBERON:0004875,8.37e-07,9;UBERON:0005721,8.37e-07,9;UBERON:0005754,8.37e-07,9;UBERON:0007297,8.37e-07,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0.309157587715317,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0.229628896329213,0.182091168006717,0,0.451199612907412,0,0.784349769176855,0,0.105551628892876,0,0,1.51141141271498,0,0.541892875087706,0,0,0,0.895499018888713,0,0,0,0,0,0,0.457847324091717,0.247528499761764,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715880777515084,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0.470531639396343,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0.71635536432595,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,2.74813611802872,0,0.183428598521679,0.231051332300676,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,1.06727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:123452979..123452989,- | |||
}} |
Latest revision as of 15:10, 29 July 2015
Short description: | p@chr3:123452979..123452989, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:123452979..123452989, - |
Coexpression cluster: | C4275_oral_transitionalcell_tridermal_mesothelioma_Renal_Fibroblast_meningioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 8.00e-18 | 3 |
stem cell of epidermis | 8.00e-18 | 3 |
hair follicle cell | 2.94e-11 | 5 |
glomerular endothelial cell | 3.26e-11 | 5 |
glomerular cell | 2.18e-08 | 7 |
kidney corpuscule cell | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 8.00e-18 | 3 |
papillary layer of dermis | 8.00e-18 | 3 |
mucosa of oral region | 8.82e-14 | 4 |
respiratory system mucosa | 8.82e-14 | 4 |
hair follicle | 2.94e-11 | 5 |
hair follicle placode | 2.94e-11 | 5 |
transitional epithelium | 1.57e-09 | 6 |
primitive nephron | 2.18e-08 | 7 |
renal glomerulus | 2.18e-08 | 7 |
renal corpuscle | 2.18e-08 | 7 |
glomerular capsule | 2.18e-08 | 7 |
metanephric mesenchyme | 2.18e-08 | 7 |
glomerular tuft | 2.18e-08 | 7 |
S-shaped body | 2.18e-08 | 7 |
renal vesicle | 2.18e-08 | 7 |
comma-shaped body | 2.18e-08 | 7 |
mesonephric epithelium | 1.69e-07 | 8 |
mesonephric tubule | 1.69e-07 | 8 |
nephric duct | 1.69e-07 | 8 |
renal duct | 1.69e-07 | 8 |
mesonephric duct | 1.69e-07 | 8 |
pronephric duct | 1.69e-07 | 8 |
dermis | 7.91e-07 | 9 |
dermatome | 7.91e-07 | 9 |
future dermis | 7.91e-07 | 9 |
mesonephros | 8.37e-07 | 9 |
pronephros | 8.37e-07 | 9 |
nephrogenic cord | 8.37e-07 | 9 |
pronephric mesoderm | 8.37e-07 | 9 |
rostral part of nephrogenic cord | 8.37e-07 | 9 |
presumptive pronephric mesoderm | 8.37e-07 | 9 |