FFCP PHASE1:Hg19::chr3:12704956..12704973,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:12704956..12704973,- | |||
|description=CAGE_peak_at_chr3:12704956..12704973,- | |||
|id=chr3:12704956..12704973,- | |||
|ontology_enrichment_celltype=CL:0000057!8.42e-15!75;CL:0000055!3.19e-14!180;CL:0002620!1.97e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.66e-14;23!CL:0000057;4.59e-09;73!CL:0002552;1.50e-08;5!CL:0000515;2.96e-08;3!CL:0000197;1.03e-07;6!CL:0000098;1.03e-07;6!CL:0002167;1.03e-07;6!CL:0002561;6.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,9.25e-15,23;CL:0000057,1.74e-13,76;CL:0002552,1.48e-08,5;CL:0000197,8.65e-08,6;CL:0000098,8.65e-08,6;CL:0002167,8.65e-08,6;CL:0002561,6.42e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.09e-08;5!DOID:450;5.09e-08;5!DOID:66;5.09e-08;5!DOID:423;5.09e-08;5!DOID:0080000;5.09e-08;5!DOID:11722;5.09e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.43e-08,5;DOID:450,5.43e-08,5;DOID:66,5.43e-08,5;DOID:423,5.43e-08,5;DOID:0080000,5.43e-08,5;DOID:11722,5.43e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.01e-12!95;UBERON:0002199!7.36e-07!45;UBERON:0002416!7.36e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.07e-10;41!UBERON:0002199;1.57e-08;46!UBERON:0002416;1.57e-08;46!UBERON:0003102;1.53e-07;50!UBERON:0005933;6.38e-07;2!UBERON:0005942;6.38e-07;2!UBERON:0005932;6.38e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.21e-13,41;UBERON:0002199,6.13e-13,46;UBERON:0002416,6.13e-13,46;UBERON:0003102,1.95e-12,99;UBERON:0005933,6.42e-07,2;UBERON:0005942,6.42e-07,2;UBERON:0005932,6.42e-07,2 | |||
|phase1_expression=1.2717486548939,3.21150785836475,0.563817616383885,3.00219895059391,2.68176656656373,0,2.53299878168311,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53435074212236,1.0843174571537,4.51204119572301,1.59331170856906,0,0.973269740605272,0,0.221729397462564,0.175669571386252,0.327447688744282,0,0,1.29818957461873,1.39303789839414,0.26591592103773,0,0,0,0,0,0,1.69592382577203,0,0.550236083880135,0.417989933073621,1.03366703667732,0,0.33472061276467,0.805658634218294,0,0,0,0.81014194788176,0,0,0.225222960966644,0,0,0.366403487860815,0,3.87780264148325,0.436094052142534,0.496971951695318,0.379891534993739,0.794455084879313,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0.933633106199299,0.404132016209064,0.326923806226917,0.908144565869588,0,0,0,2.2818872861778,1.04614076386261,0,0.485618833104395,0.140450806702248,1.22492502752936,0.491337269247072,1.34323515528495,5.94001428641027,6.18167323196392,0,0,0.673344455816265,0.375355559615893,1.10825646193673,0.438977620880838,5.51678032438235,6.91095070970345,0.567160915800105,1.79389635688862,3.20336083227851,1.27159140695737,0,1.03052529238439,1.54584324027377,1.8611685633159,0.337552664482532,0.292311015483596,1.26216887122057,1.93304787148829,0.323292113637624,1.77504796258307,1.41052937518696,1.18692414617341,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,1.38134921352481,10.6804623447355,15.8813485967309,0.709840800239063,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,0.179117045405697,0,0,0.492663237895943,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,1.4377491329495,2.29723871668228,0,2.17171960001369,1.2328579353023,2.32779252211864,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0.414415513436035,0,0.500170521059677,0.271265023699736,2.9115920614313,7.31558854068363,7.41201350659493,3.98280810975225,6.3198680942821,2.27407504055985,2.0694614258501,0.664225598535437,0.921845842708516,1.12948698808508,0,0,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0.496215615637554,1.99500565274481,1.12264037773229,0.896974044789907,3.58195074346692,0.804269605718038,1.48418066444991,0.154209693802656,0.532685175939381,0,0.519254429183621,0,0.120859449591622,0,0.184161977871793,0.34444334449382,0,2.22911505431021,0,0,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,2.29610251989794,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.255225424989168,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,1.00187420719394,0,0,0.190630193923825,0.255897791311334,0,0.95460974377781,0,0.179872457583315,0,0.235624804691373,1.2130948894399,0,0.421258456238981,0,0,1.05650146756755,0.409499734223957,0.565621727814851,0,0.551365343546124,0,0.876901770507525,0,0,0.608731130888112,0,0,0,0.589494246078727,0.35667105148125,0,0.844430541190656,0.987884678879706,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.398495976502139,0,0,0,0,4.0435146396035,0.0898683511473268,0,0,0.394573622547734,0,4.44547960578548,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0.435753854075961,0.139423744278603,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.61214552326098,0.126373159256976,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0.174118413160805,0,0,0.0967563312890851,0.292357268344742,0.246346371159628,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0.213452994739353,0.599428828746391,0,0,0,0,0.124252535565433,0,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0,0,2.57859264851974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| |||
|short_description=p@chr3:12704956..12704973,- | |||
}} |
Latest revision as of 15:24, 29 July 2015
Short description: | p@chr3:12704956..12704973, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:12704956..12704973, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 9.25e-15 | 23 |
fibroblast | 1.74e-13 | 76 |
fibroblast of gingiva | 1.48e-08 | 5 |
receptor cell | 8.65e-08 | 6 |
sensory epithelial cell | 8.65e-08 | 6 |
olfactory epithelial cell | 8.65e-08 | 6 |
outer root sheath cell | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.21e-13 | 41 |
integument | 6.13e-13 | 46 |
integumental system | 6.13e-13 | 46 |
surface structure | 1.95e-12 | 99 |
hair root sheath | 6.42e-07 | 2 |
hair outer root sheath | 6.42e-07 | 2 |
bulb of hair follicle | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.43e-08 | 5 |
myotonic disease | 5.43e-08 | 5 |
muscle tissue disease | 5.43e-08 | 5 |
myopathy | 5.43e-08 | 5 |
muscular disease | 5.43e-08 | 5 |
myotonic dystrophy | 5.43e-08 | 5 |