FFCP PHASE1:Hg19::chr3:13044044..13044048,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:13044044..13044048,-
|short_description=p@chr3:13044044..13044048,-
|description=CAGE_peak_at_chr3:13044044..13044048,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:13044044..13044048,- | |||
|coexpression_cluster_id=C3381 | |||
|description=CAGE_peak_at_chr3:13044044..13044048,- | |||
|id=chr3:13044044..13044048,- | |||
|ontology_enrichment_celltype=CL:0000738!1.15e-45!140;CL:0002087!3.09e-42!119;CL:0000037!5.15e-41!172;CL:0000566!5.15e-41!172;CL:0002032!2.05e-38!165;CL:0000837!2.05e-38!165;CL:0000988!3.29e-37!182;CL:0002031!1.43e-36!124;CL:0002057!2.96e-29!42;CL:0000860!1.63e-26!45;CL:0000766!1.27e-25!76;CL:0002009!3.74e-22!65;CL:0002194!1.12e-21!63;CL:0000576!1.12e-21!63;CL:0000040!1.12e-21!63;CL:0000559!1.12e-21!63;CL:0000763!1.05e-20!112;CL:0000049!1.05e-20!112;CL:0000839!1.97e-19!70;CL:0000557!3.20e-19!71;CL:0000542!1.02e-16!53;CL:0000051!1.02e-16!53;CL:0000838!5.03e-16!52;CL:0002393!3.06e-12!9;CL:0002397!3.06e-12!9;CL:0000219!8.89e-10!390;CL:0000094!2.92e-09!8;CL:0000134!3.51e-09!358;CL:0002320!1.44e-08!365;CL:0000624!8.13e-08!6;CL:0000945!1.91e-07!24;CL:0000826!1.91e-07!24;CL:0000084!2.16e-07!25;CL:0000827!2.16e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002393;6.93e-17;6!CL:0002397;6.93e-17;6!CL:0000775;2.34e-15;3!CL:0000094;1.46e-12;8!CL:0000081;2.78e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.10e-15,3;CL:0000094,1.32e-12,8;CL:0002393,1.90e-11,9;CL:0002397,1.90e-11,9;CL:0000738,2.50e-09,136;CL:0000081,2.59e-09,11;CL:0000037,1.26e-08,168;CL:0000766,2.28e-08,72;CL:0000988,4.34e-08,177;CL:0002032,1.31e-07,161;CL:0000837,1.31e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.82e-21!102;UBERON:0003061!3.82e-21!102;UBERON:0002193!7.68e-18!112;UBERON:0002371!1.20e-16!80;UBERON:0001474!1.87e-15!86;UBERON:0004765!6.36e-13!101;UBERON:0001434!6.36e-13!101;UBERON:0002405!1.75e-10!115;UBERON:0002384!9.54e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.07e-11;1!UBERON:0005208;1.07e-11;1!UBERON:0004145;1.07e-11;1!UBERON:0005946;1.07e-11;1!UBERON:0005965;1.07e-11;1!UBERON:0002078;1.07e-11;1!UBERON:0000178;7.88e-07;15!UBERON:0000179;7.88e-07;15!UBERON:0000463;7.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,8.64e-12,1;UBERON:0005208,8.64e-12,1;UBERON:0005946,8.64e-12,1;UBERON:0005965,8.64e-12,1;UBERON:0002078,8.64e-12,1;UBERON:0000178,8.13e-07,15;UBERON:0000179,8.13e-07,15;UBERON:0000463,8.13e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0.246301768349837,0.0787107813136792,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0,0.284338464974843,0,6.64794490238253,3.81034450193269,3.68918480216948,0,0.32389366601898,0,0,0,0.485168122375632,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,0,0,0.689491361473237,0.645484683583826,0,0.752969358170419,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,0.426224750532694,0.580418477257168,0.56738522469114,0,1.00499466102697,0.521482918420201,0.65156653411535,1.21079900526674,0,0.316462387440884,0.422510572623884,0.637812899895131,0.209658645508376,0.44931452458598,0.300353785683013,0.32145117339416,0.570025487482497,0.19891667719909,0.547992461293902,0,0.546138611262131,0,1.70692089026603,0.400395987036012,0,0,0,2.27685187643779,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0.616804496998528,0.167186495390678,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0.221533894583621,0.541607727530031,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0,0.444859689486181,0,1.04535523804977,0,0.383220493601921,0.34362744548263,0,0,0,0.950452044448374,0.301150238155546,0,1.24930726552346,0,0,0,0.802320587350522,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,0.385029108839245,0.254094624222463,1.30139853857622,0,0,0,5.24304916763028,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0.764637207142375,0,0.238231775457789,0.822724546172388,0,0,1.58625035258854,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0.456469358066384,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75901493089674,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0,0,0,0.525774708558629,0.558564802544508,0,1.43574604915363,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0.314108192500469,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0.460935950223117,0.171488009437418,0.135939465953663,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0.246301768349837,0.0787107813136792,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0,0.284338464974843,0,6.64794490238253,3.81034450193269,3.68918480216948,0,0.32389366601898,0,0,0,0.485168122375632,0.464858073811369,0.822335776043652,0.309706370895104,0.575384784644301,0,0,0.689491361473237,0.645484683583826,0,0.752969358170419,0,0,0.612167784741805,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,0.426224750532694,0.580418477257168,0.56738522469114,0,1.00499466102697,0.521482918420201,0.65156653411535,1.21079900526674,0,0.316462387440884,0.422510572623884,0.637812899895131,0.209658645508376,0.44931452458598,0.300353785683013,0.32145117339416,0.570025487482497,0.19891667719909,0.547992461293902,0,0.546138611262131,0,1.70692089026603,0.400395987036012,0,0,0,2.27685187643779,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0.393010762749165,0.616804496998528,0.167186495390678,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0.221533894583621,0.541607727530031,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0,0.444859689486181,0,1.04535523804977,0,0.383220493601921,0.34362744548263,0,0,0,0.950452044448374,0.301150238155546,0,1.24930726552346,0,0,0,0.802320587350522,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,0.385029108839245,0.254094624222463,1.30139853857622,0,0,0,5.24304916763028,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,1.01489521846434,0.764637207142375,0,0.238231775457789,0.822724546172388,0,0,1.58625035258854,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0.456469358066384,0,2.50634477090067,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75901493089674,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0,0,0,0.525774708558629,0.558564802544508,0,1.43574604915363,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0.314108192500469,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0.546974809018219,0,0,0,0,0.535701835878287,0,0,0,0,0.460935950223117,0.171488009437418,0.135939465953663,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p@chr3:13044044..13044048,- | |||
}} | }} |
Latest revision as of 15:48, 29 July 2015
Short description: | p@chr3:13044044..13044048, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:13044044..13044048, - |
Coexpression cluster: | C3381_CD14_Neutrophils_Eosinophils_Peripheral_CD4_CD19_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.10e-15 | 3 |
granulocyte | 1.32e-12 | 8 |
intermediate monocyte | 1.90e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.90e-11 | 9 |
leukocyte | 2.50e-09 | 136 |
blood cell | 2.59e-09 | 11 |
hematopoietic stem cell | 1.26e-08 | 168 |
myeloid leukocyte | 2.28e-08 | 72 |
hematopoietic cell | 4.34e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.31e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 8.64e-12 | 1 |
right atrium valve | 8.64e-12 | 1 |
outflow tract of atrium | 8.64e-12 | 1 |
outflow part of right atrium | 8.64e-12 | 1 |
right cardiac atrium | 8.64e-12 | 1 |
blood | 8.13e-07 | 15 |
haemolymphatic fluid | 8.13e-07 | 15 |
organism substance | 8.13e-07 | 15 |