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FFCP PHASE1:Hg19::chr3:193356854..193356864,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:193356854..193356864,+
|coexpression_cluster_id=C86
|coexpression_cluster_id=C86
|description=CAGE_peak_at_chr3:193356854..193356864,+
|description=CAGE_peak_at_chr3:193356854..193356864,+
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0000785!7.73e-10!2;CL:0000955!7.73e-10!2;CL:0000818!7.73e-10!2;CL:0000954!7.73e-10!2;CL:0000816!7.73e-10!2;CL:0000817!8.03e-07!3
|ontology_enrichment_celltype=CL:0000785!7.73e-10!2;CL:0000955!7.73e-10!2;CL:0000818!7.73e-10!2;CL:0000954!7.73e-10!2;CL:0000816!7.73e-10!2;CL:0000817!8.03e-07!3
|ontology_enrichment_celltype_v019=CL:0000511;2.55e-98;1!CL:0002625;2.55e-98;1!CL:0000216;2.55e-98;1!CL:0002253;2.74e-50;2!CL:0002563;5.56e-26;4!CL:0000154;9.07e-18;6
|ontology_enrichment_celltype_v019=CL:0000511;2.55e-98;1!CL:0002625;2.55e-98;1!CL:0000216;2.55e-98;1!CL:0002253;2.74e-50;2!CL:0002563;5.56e-26;4!CL:0000154;9.07e-18;6
|ontology_enrichment_celltype_v019_2=CL:0000511,2.55e-98,1;CL:0002625,2.55e-98,1;CL:0000216,2.55e-98,1;CL:0002253,2.74e-50,2;CL:0002563,5.56e-26,4;CL:0000154,9.07e-18,6
|ontology_enrichment_development_v019=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:171!2.82e-07!10;DOID:169!3.89e-07!6
|ontology_enrichment_disease=DOID:171!2.82e-07!10;DOID:169!3.89e-07!6
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=UBERON:0001136;2.55e-98;1!UBERON:0001343;2.55e-98;1!UBERON:0004910;2.55e-98;1!UBERON:0004813;2.55e-98;1!UBERON:0004909;4.52e-50;2!UBERON:0001052;5.56e-26;4!UBERON:0001242;5.56e-26;4!UBERON:0001262;5.56e-26;4!UBERON:0004786;5.56e-26;4!UBERON:0004808;5.56e-26;4!UBERON:0001277;5.56e-26;4!UBERON:0005904;7.14e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0000485;1.65e-15;7!UBERON:0003929;1.65e-15;7!UBERON:0000490;1.90e-14;33!UBERON:0003350;9.39e-14;8!UBERON:0000473;1.07e-13;8!UBERON:0001155;2.19e-12;9!UBERON:0000058;3.02e-11;10!UBERON:0000059;2.16e-10;11!UBERON:0003135;2.37e-10;11!UBERON:0000160;7.18e-07;17
|ontology_enrichment_uberon_v019=UBERON:0001136;2.55e-98;1!UBERON:0001343;2.55e-98;1!UBERON:0004910;2.55e-98;1!UBERON:0004813;2.55e-98;1!UBERON:0004909;4.52e-50;2!UBERON:0001052;5.56e-26;4!UBERON:0001242;5.56e-26;4!UBERON:0001262;5.56e-26;4!UBERON:0004786;5.56e-26;4!UBERON:0004808;5.56e-26;4!UBERON:0001277;5.56e-26;4!UBERON:0005904;7.14e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0000485;1.65e-15;7!UBERON:0003929;1.65e-15;7!UBERON:0000490;1.90e-14;33!UBERON:0003350;9.39e-14;8!UBERON:0000473;1.07e-13;8!UBERON:0001155;2.19e-12;9!UBERON:0000058;3.02e-11;10!UBERON:0000059;2.16e-10;11!UBERON:0003135;2.37e-10;11!UBERON:0000160;7.18e-07;17
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.55e-98,1;UBERON:0001343,2.55e-98,1;UBERON:0004910,2.55e-98,1;UBERON:0005154,2.55e-98,1;UBERON:0005295,2.55e-98,1;UBERON:0004813,2.55e-98,1;UBERON:0005297,2.55e-98,1;UBERON:0005294,2.55e-98,1;UBERON:0010141,2.55e-98,1;UBERON:0005891,2.55e-98,1;UBERON:0004909,4.52e-50,2;UBERON:0001052,5.56e-26,4;UBERON:0001242,5.56e-26,4;UBERON:0001262,5.56e-26,4;UBERON:0004786,5.56e-26,4;UBERON:0004808,5.56e-26,4;UBERON:0001277,5.56e-26,4;UBERON:0005904,7.14e-26,4;UBERON:0004907,4.21e-21,5;UBERON:0003350,9.39e-14,8;UBERON:0000473,1.07e-13,8;UBERON:0004871,1.07e-13,8;UBERON:0001155,2.19e-12,9;UBERON:0000485,2.19e-12,9;UBERON:0000059,2.16e-10,11;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0004122,5.93e-08,15;UBERON:0000160,7.18e-07,17
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|short_description=p@chr3:193356854..193356864,+
|short_description=p@chr3:193356854..193356864,+
}}
}}

Latest revision as of 19:34, 29 July 2015

Short description:p@chr3:193356854..193356864, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr3:193356854..193356864, +
Coexpression cluster:C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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