FFCP PHASE1:Hg19::chr3:98275107..98275141,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98275107..98275141,- | |||
|coexpression_cluster_id=C1931 | |||
|description=CAGE_peak_at_chr3:98275107..98275141,- | |description=CAGE_peak_at_chr3:98275107..98275141,- | ||
|id=chr3:98275107..98275141,- | |id=chr3:98275107..98275141,- | ||
|ontology_enrichment_celltype=CL:0000988!6.89e-24!182;CL:0000037!9.60e-23!172;CL:0000566!9.60e-23!172;CL:0002032!1.48e-22!165;CL:0000837!1.48e-22!165;CL:0000738!6.22e-21!140;CL:0002087!4.59e-20!119;CL:0002031!6.74e-20!124;CL:0002057!5.03e-12!42;CL:0000838!1.01e-11!52;CL:0000763!1.31e-11!112;CL:0000049!1.31e-11!112;CL:0000542!2.23e-11!53;CL:0000051!2.23e-11!53;CL:0000860!7.64e-11!45;CL:0002009!6.15e-09!65;CL:0000084!7.42e-09!25;CL:0000827!7.42e-09!25;CL:0000839!1.60e-08!70;CL:0000557!1.97e-08!71;CL:0002194!2.08e-08!63;CL:0000576!2.08e-08!63;CL:0000040!2.08e-08!63;CL:0000559!2.08e-08!63;CL:0000791!1.92e-07!18;CL:0000789!1.92e-07!18;CL:0002420!1.92e-07!18;CL:0002419!1.92e-07!18;CL:0000790!1.92e-07!18;CL:0000080!2.10e-07!6;CL:0000766!2.47e-07!76;CL:0000624!8.34e-07!6 | |ontology_enrichment_celltype=CL:0000988!6.89e-24!182;CL:0000037!9.60e-23!172;CL:0000566!9.60e-23!172;CL:0002032!1.48e-22!165;CL:0000837!1.48e-22!165;CL:0000738!6.22e-21!140;CL:0002087!4.59e-20!119;CL:0002031!6.74e-20!124;CL:0002057!5.03e-12!42;CL:0000838!1.01e-11!52;CL:0000763!1.31e-11!112;CL:0000049!1.31e-11!112;CL:0000542!2.23e-11!53;CL:0000051!2.23e-11!53;CL:0000860!7.64e-11!45;CL:0002009!6.15e-09!65;CL:0000084!7.42e-09!25;CL:0000827!7.42e-09!25;CL:0000839!1.60e-08!70;CL:0000557!1.97e-08!71;CL:0002194!2.08e-08!63;CL:0000576!2.08e-08!63;CL:0000040!2.08e-08!63;CL:0000559!2.08e-08!63;CL:0000791!1.92e-07!18;CL:0000789!1.92e-07!18;CL:0002420!1.92e-07!18;CL:0002419!1.92e-07!18;CL:0000790!1.92e-07!18;CL:0000080!2.10e-07!6;CL:0000766!2.47e-07!76;CL:0000624!8.34e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.08e-07;5!CL:0000945;2.17e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.12e-11,177;CL:0002032,4.78e-10,161;CL:0000837,4.78e-10,161;CL:0000037,2.18e-09,168;CL:0000738,1.42e-07,136;CL:0000453,1.96e-07,5;CL:0000945,2.13e-07,24;CL:0000826,2.13e-07,24;CL:0000838,2.73e-07,52;CL:0002031,3.25e-07,120;CL:0000542,4.12e-07,53;CL:0000051,4.12e-07,53;CL:0002087,9.30e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.17e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.31e-07,51;DOID:0060083,2.31e-07,51;DOID:0060058,8.11e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.38e-11!102;UBERON:0003061!4.38e-11!102;UBERON:0002193!4.78e-10!112;UBERON:0002371!8.43e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!4.38e-11!102;UBERON:0003061!4.38e-11!102;UBERON:0002193!4.78e-10!112;UBERON:0002371!8.43e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64796630007176,7.63535481884495,6.21815172378066,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0.32389366601898,0,0,0.377875943688809,0,0.464858073811369,0,0.309706370895104,1.43846196161075,1.0246428261164,0.945928919554341,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0.224723484445085,0.918251677112708,1.60464513538047,0,0.329851300186716,0.797854630486527,0,0.580418477257168,0,0,1.00499466102697,1.0429658368404,1.08594422352558,0,1.10483290796269,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983548850569165,0.393010762749165,0.411202997999018,4.68122187093899,0,0,0,9.24706792146941,0.883817722424512,0.221533894583621,1.35401931882508,3.84273959177025,6.50296737799391,14.1416597959161,25.1478516185122,17.3881851441032,0,0,0,13.2571930956152,0.383220493601921,0,0.253019692019503,0,0,0,0.451725357233318,0,0,0,0.821127996921047,0.604820229674197,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.1809560285824,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.766021480529467,2.11673582723883,0,5.61594356226918,0,0,0,1.52362600021443,14.452926759333,6.25579092292247,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41617434020418,0,0.19924798825107,0.276283915531148,0,3.98847861758404,14.8932614607894,0,0.269605053441981,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.736805414104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34547636716165,0,0,0,0.0884575645033392,0,62.5659581516112,15.9397481240989,8.56259985944734,0,0,0,0.364909578431332,0,0,0,0,0,0,7.21552413189564,1.7626992537532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,45.0492569813619,0,0.599428828746391,0,0,0,0,9.69169777410374,0,0,0,2.54995544090804,38.7193790468035,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37460837327251,0,0,0,0,0,3.16801009558219,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,4.01915574656957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,5.5859750818118,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.974301544196942,2.39156712564054,1.63565394255844,0.655219697692825,0,0,20.5987017730578,0.213383459388282,0,0,0.736423801007363,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.10348501690656,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,1.85986280589,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,17.6895845987124,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0.673520530145875,0.0717222053926763,0,0,0.853818767021724,0,0,0,0.122241444182866,0,0,0,6.73193833836789 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| ||
|short_description=p@chr3:98275107..98275141,- | |short_description=p@chr3:98275107..98275141,- | ||
}} | }} |
Latest revision as of 00:02, 30 July 2015
Short description: | p@chr3:98275107..98275141, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98275107..98275141, - |
Coexpression cluster: | C1931_cholangiocellular_NK_cord_gall_glioma_CD4_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.12e-11 | 177 |
hematopoietic oligopotent progenitor cell | 4.78e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.78e-10 | 161 |
hematopoietic stem cell | 2.18e-09 | 168 |
leukocyte | 1.42e-07 | 136 |
Langerhans cell | 1.96e-07 | 5 |
lymphocyte of B lineage | 2.13e-07 | 24 |
pro-B cell | 2.13e-07 | 24 |
lymphoid lineage restricted progenitor cell | 2.73e-07 | 52 |
hematopoietic lineage restricted progenitor cell | 3.25e-07 | 120 |
lymphocyte | 4.12e-07 | 53 |
common lymphoid progenitor | 4.12e-07 | 53 |
nongranular leukocyte | 9.30e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.31e-07 | 51 |
immune system cancer | 2.31e-07 | 51 |
lymphoma | 8.11e-07 | 10 |