FFCP PHASE1:Hg19::chr4:171147735..171147748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:171147735..171147748,+ | |||
|coexpression_cluster_id=C2363 | |||
|description=CAGE_peak_at_chr4:171147735..171147748,+ | |description=CAGE_peak_at_chr4:171147735..171147748,+ | ||
|id=chr4:171147735..171147748,+ | |id=chr4:171147735..171147748,+ | ||
|ontology_enrichment_celltype=CL:0000244!1.93e-09!4;CL:0000731!1.93e-09!4 | |ontology_enrichment_celltype=CL:0000244!1.93e-09!4;CL:0000731!1.93e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.35e-19;4!CL:0000731;1.35e-19;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.23e-19,4;CL:0000731,1.23e-19,4 | |||
|ontology_enrichment_development_v019=UBERON:0001041;5.57e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.56e-14!169;UBERON:0000925!2.56e-14!169;UBERON:0006595!2.56e-14!169;UBERON:0005911!2.47e-11!82;UBERON:0001007!3.26e-11!155;UBERON:0001555!3.26e-11!155;UBERON:0007026!3.26e-11!155;UBERON:0000365!1.35e-10!5;UBERON:0004921!1.58e-10!129;UBERON:0004185!1.58e-10!129;UBERON:0005910!9.78e-09!6;UBERON:0006554!7.80e-08!44;UBERON:0005409!1.25e-07!35;UBERON:0001008!1.42e-07!45;UBERON:0000077!1.99e-07!130 | |ontology_enrichment_uberon=UBERON:0004119!2.56e-14!169;UBERON:0000925!2.56e-14!169;UBERON:0006595!2.56e-14!169;UBERON:0005911!2.47e-11!82;UBERON:0001007!3.26e-11!155;UBERON:0001555!3.26e-11!155;UBERON:0007026!3.26e-11!155;UBERON:0000365!1.35e-10!5;UBERON:0004921!1.58e-10!129;UBERON:0004185!1.58e-10!129;UBERON:0005910!9.78e-09!6;UBERON:0006554!7.80e-08!44;UBERON:0005409!1.25e-07!35;UBERON:0001008!1.42e-07!45;UBERON:0000077!1.99e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.05e-15;5!UBERON:0005910;4.16e-13;6!UBERON:0000059;1.13e-10;11!UBERON:0005409;3.52e-09;22!UBERON:0000160;6.72e-09;17!UBERON:0001155;8.57e-09;9!UBERON:0006554;7.22e-07;30!UBERON:0001008;7.22e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.74e-16,5;UBERON:0005910,3.91e-13,6;UBERON:0000059,1.11e-10,11;UBERON:0004119,2.81e-10,160;UBERON:0000925,2.81e-10,160;UBERON:0006595,2.81e-10,160;UBERON:0004921,5.70e-10,118;UBERON:0005911,9.97e-10,82;UBERON:0009854,1.98e-09,23;UBERON:0000160,7.40e-09,17;UBERON:0001155,8.32e-09,9;UBERON:0009856,3.13e-08,26;UBERON:0006554,4.41e-08,47;UBERON:0005409,5.33e-08,25;UBERON:0001008,7.08e-08,48;UBERON:0008835,2.19e-07,22;UBERON:0003894,2.19e-07,22;UBERON:0001007,2.27e-07,145;UBERON:0001555,2.27e-07,145;UBERON:0007026,2.27e-07,145 | |||
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| ||
|short_description=p@chr4:171147735..171147748,+ | |short_description=p@chr4:171147735..171147748,+ | ||
}} | }} |
Latest revision as of 03:19, 30 July 2015
Short description: | p@chr4:171147735..171147748, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:171147735..171147748, + |
Coexpression cluster: | C2363_signet_adenocarcinoma_Urothelial_hepatoblastoma_colon_serous_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.23e-19 | 4 |
urothelial cell | 1.23e-19 | 4 |
Ontology term | p-value | n |
---|---|---|
urothelium | 9.74e-16 | 5 |
transitional epithelium | 3.91e-13 | 6 |
large intestine | 1.11e-10 | 11 |
endoderm-derived structure | 2.81e-10 | 160 |
endoderm | 2.81e-10 | 160 |
presumptive endoderm | 2.81e-10 | 160 |
subdivision of digestive tract | 5.70e-10 | 118 |
endo-epithelium | 9.97e-10 | 82 |
digestive tract diverticulum | 1.98e-09 | 23 |
intestine | 7.40e-09 | 17 |
colon | 8.32e-09 | 9 |
sac | 3.13e-08 | 26 |
urinary system structure | 4.41e-08 | 47 |
gastrointestinal system | 5.33e-08 | 25 |
renal system | 7.08e-08 | 48 |
hepatic diverticulum | 2.19e-07 | 22 |
liver primordium | 2.19e-07 | 22 |
digestive system | 2.27e-07 | 145 |
digestive tract | 2.27e-07 | 145 |
primitive gut | 2.27e-07 | 145 |