FFCP PHASE1:Hg19::chr4:6692355..6692360,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-109bp_to_ENST00000499502_5end | |||
|cluster_id=chr4:6692355..6692360,- | |||
|coexpression_cluster_id=C300 | |||
|description=CAGE_peak_3_at_ENST00000499502_5end | |||
|id=chr4:6692355..6692360,- | |||
|ontology_enrichment_celltype=CL:0000791!6.84e-35!18;CL:0000789!6.84e-35!18;CL:0002420!6.84e-35!18;CL:0002419!6.84e-35!18;CL:0000790!6.84e-35!18;CL:0000084!6.50e-31!25;CL:0000827!6.50e-31!25;CL:0000625!2.25e-26!11;CL:0000838!2.24e-18!52;CL:0000542!6.28e-18!53;CL:0000051!6.28e-18!53;CL:0000037!7.08e-15!172;CL:0000566!7.08e-15!172;CL:0000738!2.89e-14!140;CL:0000988!1.52e-13!182;CL:0002087!2.88e-13!119;CL:0002032!7.83e-12!165;CL:0000837!7.83e-12!165;CL:0000623!1.23e-10!3;CL:0000825!1.23e-10!3;CL:0002031!2.39e-10!124;CL:0000898!2.43e-09!3;CL:0000842!3.85e-09!3;CL:0000624!4.13e-08!6;CL:0000893!3.60e-07!2;CL:0002489!3.60e-07!2;CL:0000809!3.60e-07!2;CL:0000808!3.60e-07!2;CL:0000894!3.60e-07!2;CL:0000806!3.60e-07!2;CL:0000807!3.60e-07!2;CL:0000805!3.60e-07!2;CL:0002425!3.60e-07!2;CL:0000224!5.93e-07!4;CL:0000815!9.64e-07!2;CL:0000792!9.64e-07!2;CL:0002677!9.64e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.82e-40;3!CL:0000625;1.09e-19;11!CL:0000791;1.91e-18;18!CL:0000789;1.91e-18;18!CL:0002419;1.91e-18;18!CL:0002127;1.84e-14;1!CL:0000911;1.84e-14;1!CL:0000814;1.84e-14;1!CL:0000084;2.75e-13;25!CL:0000542;8.49e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.24e-40,3;CL:0000825,2.24e-40,3;CL:0000625,8.17e-20,11;CL:0000791,1.59e-18,18;CL:0000789,1.59e-18,18;CL:0002420,1.59e-18,18;CL:0002419,1.59e-18,18;CL:0000790,1.59e-18,18;CL:0000838,1.19e-15,52;CL:0000542,2.42e-15,53;CL:0000051,2.42e-15,53;CL:0002127,2.11e-14,1;CL:0000914,2.11e-14,1;CL:0000911,2.11e-14,1;CL:0000814,2.11e-14,1;CL:0002042,2.11e-14,1;CL:0002039,2.11e-14,1;CL:0002040,2.11e-14,1;CL:0002041,2.11e-14,1;CL:0000084,2.42e-13,25;CL:0000827,2.42e-13,25;CL:0000893,7.52e-08,2;CL:0002489,7.52e-08,2;CL:0000809,7.52e-08,2;CL:0000808,7.52e-08,2;CL:0000894,7.52e-08,2;CL:0000806,7.52e-08,2;CL:0000807,7.52e-08,2;CL:0000805,7.52e-08,2;CL:0002425,7.52e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.91e-18;18!CL:0002425;7.03e-08;2!CL:0000051;8.49e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@ENST00000499502 | |||
}} | }} |
Latest revision as of 06:05, 30 July 2015
Short description: | p3@ENST00000499502 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000499502_5end |
Coexpression cluster: | C300_CD4_CD8_NK_Natural_blood_mycosis_Basophils |
Association with transcript: | -109bp_to_ENST00000499502_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.24e-40 | 3 |
pro-NK cell | 2.24e-40 | 3 |
CD8-positive, alpha-beta T cell | 8.17e-20 | 11 |
mature alpha-beta T cell | 1.59e-18 | 18 |
alpha-beta T cell | 1.59e-18 | 18 |
immature T cell | 1.59e-18 | 18 |
mature T cell | 1.59e-18 | 18 |
immature alpha-beta T cell | 1.59e-18 | 18 |
lymphoid lineage restricted progenitor cell | 1.19e-15 | 52 |
lymphocyte | 2.42e-15 | 53 |
common lymphoid progenitor | 2.42e-15 | 53 |
innate effector T cell | 2.11e-14 | 1 |
immature NK T cell | 2.11e-14 | 1 |
effector T cell | 2.11e-14 | 1 |
mature NK T cell | 2.11e-14 | 1 |
immature NK T cell stage IV | 2.11e-14 | 1 |
immature NK T cell stage I | 2.11e-14 | 1 |
immature NK T cell stage II | 2.11e-14 | 1 |
immature NK T cell stage III | 2.11e-14 | 1 |
T cell | 2.42e-13 | 25 |
pro-T cell | 2.42e-13 | 25 |
thymocyte | 7.52e-08 | 2 |
double negative thymocyte | 7.52e-08 | 2 |
double-positive, alpha-beta thymocyte | 7.52e-08 | 2 |
DN4 thymocyte | 7.52e-08 | 2 |
DN1 thymic pro-T cell | 7.52e-08 | 2 |
DN2 thymocyte | 7.52e-08 | 2 |
DN3 thymocyte | 7.52e-08 | 2 |
immature single positive thymocyte | 7.52e-08 | 2 |
early T lineage precursor | 7.52e-08 | 2 |